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Sequence, Chains, Asymmetric and Biological Units

Title THE STRUCTURE OF H/CEOTUB1-UBIQUITIN ALDEHYDE-UBC13~UB
Keywords UBIQUITINATION, HYDROLASE-SIGNALING PROTEIN-LIGASE COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4DHZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UBIQUITIN THIOESTERASE OTUBAIN-LIKE  A 256 2034 0
2  Protein   UBIQUITIN ALDEHYDE  B 76 593 4
3  Protein   UBIQUITIN  E 72 568 0
4  Protein   UBIQUITIN-CONJUGATING ENZYME E2 N  F 149 1171 0
total       553 4366 4

Proteins
Unit 1 LEU20 ALA21 TYR22 ASP23 GLU24 ALA25 ILE26 MET27 ALA28 GLN29 GLN30 ASP31 ARG32 ILE33 GLN34 GLN35 GLU36 ILE37 ALA38 VAL39 GLN40 ASN41 PRO42 LEU43 VAL44 ALA45 THR46 LEU47 ALA48 PRO49 PHE50 SER51 ILE52 LEU53 CYS54 ALA55 GLU56 TYR57 ASP58 ASN59 GLU60 THR61 SER62 ALA63 ALA64 PHE65 LEU66 SER67 LYS68 ALA69 THR70 GLU71 LEU72 SER73 GLU74 VAL75 TYR76 GLY77 GLU78 ILE79 ARG80 TYR81 ILE82 ARG83 GLY84 ASP85 GLY86 ASN87 CYS88 PHE89 TYR90 ARG91 ALA92 ILE93 LEU94 VAL95 GLY96 LEU97 ILE98 GLU99 ILE100 MET101 LEU102 LYS103 ASP104 ARG105 ALA106 ARG107 LEU108 GLU109 LYS110 PHE111 ILE112 ALA113 SER114 SER115 ARG116 ASP117 TRP118 THR119 ARG120 THR121 LEU122 VAL123 GLU124 LEU125 GLY126 PHE127 PRO128 ASP129 TRP130 THR131 CYS132 THR133 ASP134 PHE135 CYS136 ASP137 PHE138 PHE139 ILE140 GLU141 PHE142 LEU143 GLU144 LYS145 ILE146 HIS147 SER148 GLY149 VAL150 HIS151 THR152 GLU153 GLU154 ALA155 VAL156 TYR157 THR158 ILE159 LEU160 ASN161 ASP162 ASP163 GLY164 SER165 ALA166 ASN167 TYR168 ILE169 LEU170 MET171 PHE172 PHE173 ARG174 LEU175 ILE176 THR177 SER178 ALA179 PHE180 LEU181 LYS182 GLN183 ASN184 SER185 GLU186 GLU187 TYR188 ALA189 PRO190 PHE191 ILE192 ASP193 GLU194 GLY195 MET196 THR197 VAL198 ALA199 GLN200 TYR201 CYS202 GLU203 GLN204 GLU205 ILE206 GLU207 PRO208 MET209 TRP210 LYS211 ASP212 ALA213 ASP214 HIS215 LEU216 ALA217 ILE218 ASN219 SER220 LEU221 ILE222 LYS223 ALA224 ALA225 GLY226 THR227 ARG228 VAL229 ARG230 ILE231 GLU232 TYR233 MET234 ASP235 ARG236 THR237 ALA238 ALA239 PRO240 ASN241 GLY242 GLY243 TRP244 HIS245 TYR246 ASP247 ILE248 PRO249 SER250 ASP251 ASP252 GLN253 GLN254 ILE255 ALA256 PRO257 GLU258 ILE259 THR260 LEU261 LEU262 TYR263 ARG264 PRO265 GLY266 HIS267 TYR268 ASP269 VAL270 ILE271 TYR272 LYS273 LYS274 ASP275
Unit 2 MET501 GLN502 ILE503 PHE504 VAL505 LYS506 THR507 LEU508 THR509 GLY510 LYS511 THR512 ILE513 THR514 LEU515 GLU516 VAL517 GLU518 PRO519 SER520 ASP521 THR522 ILE523 GLU524 ASN525 VAL526 LYS527 ALA528 LYS529 ILE530 GLN531 ASP532 LYS533 GLU534 GLY535 ILE536 PRO537 PRO538 ASP539 GLN540 GLN541 ARG542 LEU543 ILE544 PHE545 ALA546 GLY547 LYS548 GLN549 LEU550 GLU551 ASP552 GLY553 ARG554 THR555 LEU556 SER557 ASP558 TYR559 ASN560 ILE561 GLN562 LYS563 GLU564 SER565 THR566 LEU567 HIS568 LEU569 VAL570 LEU571 ARG572 LEU573 ARG574 GLY575 GLZ576
Unit 3 MET501 GLN502 ILE503 PHE504 VAL505 LYS506 THR507 LEU508 THR509 GLY510 LYS511 THR512 ILE513 THR514 LEU515 GLU516 VAL517 GLU518 PRO519 SER520 ASP521 THR522 ILE523 GLU524 ASN525 VAL526 LYS527 ALA528 LYS529 ILE530 GLN531 ASP532 LYS533 GLU534 GLY535 ILE536 PRO537 PRO538 ASP539 GLN540 GLN541 ARG542 LEU543 ILE544 PHE545 ALA546 GLY547 LYS548 GLN549 LEU550 GLU551 ASP552 GLY553 ARG554 THR555 LEU556 SER557 ASP558 TYR559 ASN560 ILE561 GLN562 LYS563 GLU564 SER565 THR566 LEU567 HIS568 LEU569 VAL570 LEU571 ARG572
Unit 4 GLY3 LEU4 PRO5 ARG6 ARG7 ILE8 ILE9 LYS10 GLU11 THR12 GLN13 ARG14 LEU15 LEU16 ALA17 GLU18 PRO19 VAL20 PRO21 GLY22 ILE23 LYS24 ALA25 GLU26 PRO27 ASP28 GLU29 SER30 ASN31 ALA32 ARG33 TYR34 PHE35 HIS36 VAL37 VAL38 ILE39 ALA40 GLY41 PRO42 GLN43 ASP44 SER45 PRO46 PHE47 GLU48 GLY49 GLY50 THR51 PHE52 LYS53 LEU54 GLU55 LEU56 PHE57 LEU58 PRO59 GLU60 GLU61 TYR62 PRO63 MET64 ALA65 ALA66 PRO67 LYS68 VAL69 ARG70 PHE71 MET72 THR73 LYS74 ILE75 TYR76 HIS77 PRO78 ASN79 VAL80 ASP81 LYS82 LEU83 GLY84 ARG85 ILE86 CYS87 LEU88 ASP89 ILE90 LEU91 LYS92 ASP93 LYS94 TRP95 SER96 PRO97 ALA98 LEU99 GLN100 ILE101 ARG102 THR103 VAL104 LEU105 LEU106 SER107 ILE108 GLN109 ALA110 LEU111 LEU112 SER113 ALA114 PRO115 ASN116 PRO117 ASP118 ASP119 PRO120 LEU121 ALA122 ASN123 ASP124 VAL125 ALA126 GLU127 GLN128 TRP129 LYS130 THR131 ASN132 GLU133 ALA134 GLN135 ALA136 ILE137 GLU138 THR139 ALA140 ARG141 ALA142 TRP143 THR144 ARG145 LEU146 TYR147 ALA148 MET149 ASN150 ASN151

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany