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Sequence, Chains, Asymmetric and Biological Units

Title METALLOSPHERA SEDULA VPS4 CRYSTAL STRUCTURE
Keywords HYDROLASE, ATPASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4D80     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AAA ATPASE, CENTRAL DOMAIN PROTEIN  A 269 2152 0
2  Protein   AAA ATPASE, CENTRAL DOMAIN PROTEIN  B 257 2060 0
3  Protein   AAA ATPASE, CENTRAL DOMAIN PROTEIN  C 272 2177 0
4  Protein   AAA ATPASE, CENTRAL DOMAIN PROTEIN  D 273 2187 0
5  Protein   AAA ATPASE, CENTRAL DOMAIN PROTEIN  E 262 2106 0
6  Protein   AAA ATPASE, CENTRAL DOMAIN PROTEIN  F 274 2193 0
total       1607 12875 0

Proteins
Unit 1 VAL97 THR98 LEU99 ASN100 GLU101 ILE102 VAL103 GLY104 LEU105 GLU106 ASP107 VAL108 LYS109 GLU110 ALA111 LEU112 LYS113 GLU114 ALA115 VAL116 VAL117 TYR118 PRO119 SER120 LYS121 ARG122 PRO123 ASP124 LEU125 PHE126 PRO127 LEU128 GLY129 TRP130 PRO131 ARG132 GLY133 ILE134 LEU135 LEU136 TYR137 GLY138 PRO139 PRO140 GLY141 CYS142 GLY143 LYS144 THR145 MET146 ILE147 ALA148 ALA149 ALA150 VAL151 ALA152 ASN153 GLU154 LEU155 ASP156 SER157 GLU158 PHE159 ILE160 HIS161 VAL162 ASP163 ALA164 ALA165 SER166 ILE167 MET168 SER169 LYS170 ALA175 GLU176 LYS177 ASN178 VAL179 ALA180 LYS181 ILE182 PHE183 LYS184 THR185 ALA186 ARG187 GLU188 LEU189 SER190 LYS191 LYS192 GLU193 ASN194 LYS195 PRO196 ALA197 ILE198 ILE199 PHE200 ILE201 ASP202 GLU203 LEU204 ASP205 ALA206 LEU207 LEU208 ALA209 SER210 TYR211 THR212 SER213 GLU214 VAL215 GLY216 GLY217 GLU218 ALA219 ARG220 VAL221 ARG222 ASN223 GLN224 PHE225 LEU226 LYS227 GLU228 MET229 ASP230 GLY231 LEU232 ALA233 ASP234 LYS235 ASN236 GLU237 ILE238 SER239 LYS240 VAL241 TYR242 VAL243 ILE244 GLY245 ALA246 THR247 ASN248 LYS249 PRO250 TRP251 ARG252 LEU253 ASP254 GLU255 PRO256 PHE257 LEU258 ARG259 ARG260 PHE261 GLN262 LYS263 ARG264 ILE265 TYR266 ILE267 THR268 LEU269 PRO270 ASP271 LYS272 ALA273 HIS274 ARG275 LEU276 GLU277 LEU278 LEU279 LYS280 HIS281 TYR282 SER283 SER284 LYS285 VAL286 LYS287 LEU288 ASP289 PRO290 ASN291 VAL292 ASN293 LEU294 GLU295 GLU296 LEU297 ALA298 GLU299 LEU300 THR301 ASP302 GLY303 TYR304 THR305 ALA306 SER307 ASP308 ILE309 ARG310 ASP311 ILE312 VAL313 GLN314 SER315 ALA316 HIS317 MET318 ARG319 VAL320 VAL321 LYS322 GLU323 MET324 PHE325 GLU326 LYS327 ASN328 LEU329 GLN330 GLU331 PRO332 ARG333 ALA334 ILE335 ASN336 MET337 ASP338 ASP339 PHE340 ARG341 GLU342 VAL343 LEU344 LYS345 VAL346 ARG347 LYS348 PRO349 SER350 VAL351 ASN352 GLN353 ASP354 MET355 LEU356 LYS357 ALA358 TYR359 ALA360 ALA361 TRP362 HIS363 GLU364 LYS365 PHE366 LYS367 ALA368 LEU369
Unit 2 THR98 LEU99 ASN100 GLU101 ILE102 VAL103 GLY104 LEU105 GLU106 ASP107 VAL108 LYS109 GLU110 ALA111 LEU112 LYS113 GLU114 ALA115 VAL116 VAL117 TYR118 PRO119 SER120 LYS121 ARG122 PRO123 ASP124 LEU125 PHE126 PRO127 LEU128 GLY129 TRP130 PRO131 ARG132 GLY133 ILE134 LEU135 LEU136 TYR137 GLY138 PRO139 PRO140 GLY141 CYS142 GLY143 LYS144 THR145 MET146 ILE147 ALA148 ALA149 ALA150 VAL151 ALA152 ASN153 GLU154 LEU155 ASP156 SER157 GLU158 PHE159 ILE160 HIS161 VAL162 ASP163 ALA164 ALA165 SER166 ILE167 MET168 GLY173 GLU174 ALA175 GLU176 LYS177 ASN178 VAL179 ALA180 LYS181 ILE182 PHE183 LYS184 THR185 ALA186 ARG187 GLU188 LEU189 SER190 LYS191 LYS192 GLU193 ASN194 LYS195 PRO196 ALA197 ILE198 ILE199 PHE200 ILE201 ASP202 GLU203 LEU204 ASP205 ALA206 LEU207 LEU208 GLU214 VAL215 GLY216 GLY217 GLU218 ALA219 ARG220 VAL221 ARG222 ASN223 GLN224 PHE225 LEU226 LYS227 GLU228 MET229 ASP230 GLY231 LEU232 ALA233 ILE238 SER239 LYS240 VAL241 TYR242 VAL243 ILE244 GLY245 ALA246 THR247 ASN248 LYS249 PRO250 TRP251 ARG252 LEU253 ASP254 GLU255 PRO256 PHE257 LEU258 ARG259 ARG260 PHE261 GLN262 LYS263 ARG264 ILE265 TYR266 ILE267 THR268 LEU269 PRO270 ASP271 LYS272 ALA273 HIS274 ARG275 LEU276 GLU277 LEU278 LEU279 LYS280 HIS281 TYR282 SER283 SER284 LYS285 VAL286 LYS287 LEU288 ASP289 PRO290 ASN291 VAL292 ASN293 LEU294 GLU295 GLU296 LEU297 ALA298 GLU299 LEU300 THR301 ASP302 GLY303 TYR304 THR305 ALA306 SER307 ASP308 ILE309 ARG310 ASP311 ILE312 VAL313 GLN314 SER315 ALA316 HIS317 MET318 ARG319 VAL320 VAL321 LYS322 GLU323 MET324 PHE325 GLU326 LYS327 ASN328 LEU329 GLN330 GLU331 PRO332 ARG333 ALA334 ILE335 ASN336 MET337 ASP338 ASP339 PHE340 ARG341 GLU342 VAL343 LEU344 LYS345 VAL346 ARG347 LYS348 PRO349 SER350 VAL351 ASN352 GLN353 ASP354 MET355 LEU356 LYS357 ALA358 TYR359 ALA360 ALA361 TRP362 HIS363 GLU364 LYS365 PHE366 LYS367
Unit 3 LYS96 VAL97 THR98 LEU99 ASN100 GLU101 ILE102 VAL103 GLY104 LEU105 GLU106 ASP107 VAL108 LYS109 GLU110 ALA111 LEU112 LYS113 GLU114 ALA115 VAL116 VAL117 TYR118 PRO119 SER120 LYS121 ARG122 PRO123 ASP124 LEU125 PHE126 PRO127 LEU128 GLY129 TRP130 PRO131 ARG132 GLY133 ILE134 LEU135 LEU136 TYR137 GLY138 PRO139 PRO140 GLY141 CYS142 GLY143 LYS144 THR145 MET146 ILE147 ALA148 ALA149 ALA150 VAL151 ALA152 ASN153 GLU154 LEU155 ASP156 SER157 GLU158 PHE159 ILE160 HIS161 VAL162 ASP163 ALA164 ALA165 SER166 ILE167 MET168 SER169 LYS170 TRP171 LEU172 GLY173 GLU174 ALA175 GLU176 LYS177 ASN178 VAL179 ALA180 LYS181 ILE182 PHE183 LYS184 THR185 ALA186 ARG187 GLU188 LEU189 SER190 LYS191 LYS192 GLU193 ASN194 LYS195 PRO196 ALA197 ILE198 ILE199 PHE200 ILE201 ASP202 GLU203 LEU204 ASP205 ALA206 LEU207 LEU208 ALA209 SER210 TYR211 THR212 SER213 GLU214 VAL215 GLY216 GLY217 GLU218 ALA219 ARG220 VAL221 ARG222 ASN223 GLN224 PHE225 LEU226 LYS227 GLU228 MET229 ASP230 GLY231 LEU232 ALA233 ASP234 LYS235 ASN236 GLU237 ILE238 SER239 LYS240 VAL241 TYR242 VAL243 ILE244 GLY245 ALA246 THR247 ASN248 LYS249 PRO250 TRP251 ARG252 LEU253 ASP254 GLU255 PRO256 PHE257 LEU258 ARG259 ARG260 PHE261 GLN262 LYS263 ARG264 ILE265 TYR266 ILE267 THR268 LEU269 PRO270 ASP271 LYS272 ALA273 HIS274 ARG275 LEU276 GLU277 LEU278 LEU279 LYS280 HIS281 TYR282 SER283 SER284 LYS285 VAL286 LYS287 LEU288 ASP289 PRO290 ASN291 VAL292 ASN293 LEU294 GLU295 GLU296 LEU297 ALA298 GLU299 LEU300 THR301 ASP302 GLY303 TYR304 THR305 ALA306 SER307 ASP308 ILE309 ARG310 ASP311 ILE312 VAL313 GLN314 SER315 ALA316 HIS317 MET318 ARG319 VAL320 VAL321 LYS322 GLU323 MET324 PHE325 GLU326 LYS327 ASN328 LEU329 GLN330 GLU331 PRO332 ARG333 ALA334 ILE335 ASN336 MET337 ASP338 ASP339 PHE340 ARG341 GLU342 VAL343 LEU344 LYS345 VAL346 ARG347 LYS348 PRO349 SER350 VAL351 ASN352 GLN353 ASP354 MET355 LEU356 LYS357 ALA358 TYR359 ALA360 ALA361 TRP362 HIS363 GLU364 LYS365 PHE366 LYS367
Unit 4 VAL97 THR98 LEU99 ASN100 GLU101 ILE102 VAL103 GLY104 LEU105 GLU106 ASP107 VAL108 LYS109 GLU110 ALA111 LEU112 LYS113 GLU114 ALA115 VAL116 VAL117 TYR118 PRO119 SER120 LYS121 ARG122 PRO123 ASP124 LEU125 PHE126 PRO127 LEU128 GLY129 TRP130 PRO131 ARG132 GLY133 ILE134 LEU135 LEU136 TYR137 GLY138 PRO139 PRO140 GLY141 CYS142 GLY143 LYS144 THR145 MET146 ILE147 ALA148 ALA149 ALA150 VAL151 ALA152 ASN153 GLU154 LEU155 ASP156 SER157 GLU158 PHE159 ILE160 HIS161 VAL162 ASP163 ALA164 ALA165 SER166 ILE167 MET168 SER169 LYS170 TRP171 LEU172 GLY173 GLU174 ALA175 GLU176 LYS177 ASN178 VAL179 ALA180 LYS181 ILE182 PHE183 LYS184 THR185 ALA186 ARG187 GLU188 LEU189 SER190 LYS191 LYS192 GLU193 ASN194 LYS195 PRO196 ALA197 ILE198 ILE199 PHE200 ILE201 ASP202 GLU203 LEU204 ASP205 ALA206 LEU207 LEU208 ALA209 SER210 TYR211 THR212 SER213 GLU214 VAL215 GLY216 GLY217 GLU218 ALA219 ARG220 VAL221 ARG222 ASN223 GLN224 PHE225 LEU226 LYS227 GLU228 MET229 ASP230 GLY231 LEU232 ALA233 ASP234 LYS235 ASN236 GLU237 ILE238 SER239 LYS240 VAL241 TYR242 VAL243 ILE244 GLY245 ALA246 THR247 ASN248 LYS249 PRO250 TRP251 ARG252 LEU253 ASP254 GLU255 PRO256 PHE257 LEU258 ARG259 ARG260 PHE261 GLN262 LYS263 ARG264 ILE265 TYR266 ILE267 THR268 LEU269 PRO270 ASP271 LYS272 ALA273 HIS274 ARG275 LEU276 GLU277 LEU278 LEU279 LYS280 HIS281 TYR282 SER283 SER284 LYS285 VAL286 LYS287 LEU288 ASP289 PRO290 ASN291 VAL292 ASN293 LEU294 GLU295 GLU296 LEU297 ALA298 GLU299 LEU300 THR301 ASP302 GLY303 TYR304 THR305 ALA306 SER307 ASP308 ILE309 ARG310 ASP311 ILE312 VAL313 GLN314 SER315 ALA316 HIS317 MET318 ARG319 VAL320 VAL321 LYS322 GLU323 MET324 PHE325 GLU326 LYS327 ASN328 LEU329 GLN330 GLU331 PRO332 ARG333 ALA334 ILE335 ASN336 MET337 ASP338 ASP339 PHE340 ARG341 GLU342 VAL343 LEU344 LYS345 VAL346 ARG347 LYS348 PRO349 SER350 VAL351 ASN352 GLN353 ASP354 MET355 LEU356 LYS357 ALA358 TYR359 ALA360 ALA361 TRP362 HIS363 GLU364 LYS365 PHE366 LYS367 ALA368 LEU369
Unit 5 LYS96 VAL97 THR98 LEU99 ASN100 GLU101 ILE102 VAL103 GLY104 LEU105 GLU106 ASP107 VAL108 LYS109 GLU110 ALA111 LEU112 LYS113 GLU114 ALA115 VAL116 VAL117 TYR118 PRO119 SER120 LYS121 ARG122 PRO123 ASP124 LEU125 PHE126 PRO127 LEU128 GLY129 TRP130 PRO131 ARG132 GLY133 ILE134 LEU135 LEU136 TYR137 GLY138 PRO139 PRO140 GLY141 CYS142 GLY143 LYS144 THR145 MET146 ILE147 ALA148 ALA149 ALA150 VAL151 ALA152 ASN153 GLU154 LEU155 ASP156 SER157 GLU158 PHE159 ILE160 HIS161 VAL162 ASP163 ALA164 ALA165 SER166 ILE167 MET168 GLU174 ALA175 GLU176 LYS177 ASN178 VAL179 ALA180 LYS181 ILE182 PHE183 LYS184 THR185 ALA186 ARG187 GLU188 LEU189 SER190 LYS191 LYS192 GLU193 ASN194 LYS195 PRO196 ALA197 ILE198 ILE199 PHE200 ILE201 ASP202 GLU203 LEU204 ASP205 ALA206 LEU207 LEU208 GLU214 VAL215 GLY216 GLY217 GLU218 ALA219 ARG220 VAL221 ARG222 ASN223 GLN224 PHE225 LEU226 LYS227 GLU228 MET229 ASP230 GLY231 LEU232 ALA233 ASP234 LYS235 ASN236 GLU237 ILE238 SER239 LYS240 VAL241 TYR242 VAL243 ILE244 GLY245 ALA246 THR247 ASN248 LYS249 PRO250 TRP251 ARG252 LEU253 ASP254 GLU255 PRO256 PHE257 LEU258 ARG259 ARG260 PHE261 GLN262 LYS263 ARG264 ILE265 TYR266 ILE267 THR268 LEU269 PRO270 ASP271 LYS272 ALA273 HIS274 ARG275 LEU276 GLU277 LEU278 LEU279 LYS280 HIS281 TYR282 SER283 SER284 LYS285 VAL286 LYS287 LEU288 ASP289 PRO290 ASN291 VAL292 ASN293 LEU294 GLU295 GLU296 LEU297 ALA298 GLU299 LEU300 THR301 ASP302 GLY303 TYR304 THR305 ALA306 SER307 ASP308 ILE309 ARG310 ASP311 ILE312 VAL313 GLN314 SER315 ALA316 HIS317 MET318 ARG319 VAL320 VAL321 LYS322 GLU323 MET324 PHE325 GLU326 LYS327 ASN328 LEU329 GLN330 GLU331 PRO332 ARG333 ALA334 ILE335 ASN336 MET337 ASP338 ASP339 PHE340 ARG341 GLU342 VAL343 LEU344 LYS345 VAL346 ARG347 LYS348 PRO349 SER350 VAL351 ASN352 GLN353 ASP354 MET355 LEU356 LYS357 ALA358 TYR359 ALA360 ALA361 TRP362 HIS363 GLU364 LYS365 PHE366 LYS367
Unit 6 LYS96 VAL97 THR98 LEU99 ASN100 GLU101 ILE102 VAL103 GLY104 LEU105 GLU106 ASP107 VAL108 LYS109 GLU110 ALA111 LEU112 LYS113 GLU114 ALA115 VAL116 VAL117 TYR118 PRO119 SER120 LYS121 ARG122 PRO123 ASP124 LEU125 PHE126 PRO127 LEU128 GLY129 TRP130 PRO131 ARG132 GLY133 ILE134 LEU135 LEU136 TYR137 GLY138 PRO139 PRO140 GLY141 CYS142 GLY143 LYS144 THR145 MET146 ILE147 ALA148 ALA149 ALA150 VAL151 ALA152 ASN153 GLU154 LEU155 ASP156 SER157 GLU158 PHE159 ILE160 HIS161 VAL162 ASP163 ALA164 ALA165 SER166 ILE167 MET168 SER169 LYS170 TRP171 LEU172 GLY173 GLU174 ALA175 GLU176 LYS177 ASN178 VAL179 ALA180 LYS181 ILE182 PHE183 LYS184 THR185 ALA186 ARG187 GLU188 LEU189 SER190 LYS191 LYS192 GLU193 ASN194 LYS195 PRO196 ALA197 ILE198 ILE199 PHE200 ILE201 ASP202 GLU203 LEU204 ASP205 ALA206 LEU207 LEU208 ALA209 SER210 TYR211 THR212 SER213 GLU214 VAL215 GLY216 GLY217 GLU218 ALA219 ARG220 VAL221 ARG222 ASN223 GLN224 PHE225 LEU226 LYS227 GLU228 MET229 ASP230 GLY231 LEU232 ALA233 ASP234 LYS235 ASN236 GLU237 ILE238 SER239 LYS240 VAL241 TYR242 VAL243 ILE244 GLY245 ALA246 THR247 ASN248 LYS249 PRO250 TRP251 ARG252 LEU253 ASP254 GLU255 PRO256 PHE257 LEU258 ARG259 ARG260 PHE261 GLN262 LYS263 ARG264 ILE265 TYR266 ILE267 THR268 LEU269 PRO270 ASP271 LYS272 ALA273 HIS274 ARG275 LEU276 GLU277 LEU278 LEU279 LYS280 HIS281 TYR282 SER283 SER284 LYS285 VAL286 LYS287 LEU288 ASP289 PRO290 ASN291 VAL292 ASN293 LEU294 GLU295 GLU296 LEU297 ALA298 GLU299 LEU300 THR301 ASP302 GLY303 TYR304 THR305 ALA306 SER307 ASP308 ILE309 ARG310 ASP311 ILE312 VAL313 GLN314 SER315 ALA316 HIS317 MET318 ARG319 VAL320 VAL321 LYS322 GLU323 MET324 PHE325 GLU326 LYS327 ASN328 LEU329 GLN330 GLU331 PRO332 ARG333 ALA334 ILE335 ASN336 MET337 ASP338 ASP339 PHE340 ARG341 GLU342 VAL343 LEU344 LYS345 VAL346 ARG347 LYS348 PRO349 SER350 VAL351 ASN352 GLN353 ASP354 MET355 LEU356 LYS357 ALA358 TYR359 ALA360 ALA361 TRP362 HIS363 GLU364 LYS365 PHE366 LYS367 ALA368 LEU369

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany