4D6I - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A FAMILY 98 GLYCOSIDE HYDROLASE CATALYT (SP3GH98) IN COMPLEX WITH THE TYPE 1 BLOOD GROUP A-TETRASAC (E558A L19 MUTANT)
• Keywords: HYDROLASE, BLOOD GROUP ANTIGEN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4D6I	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCOSIDE HYDROLASE	A	587	4769	0
2	Ligand		B	4	0	50
3	Ligand	GLYCOSIDE HYDROLASE	A	2	0	8
4	Water			680	0	680
total				1273	4769	738

Proteins

Unit 1

GLU 421 VAL 422 ASP 423 LYS 424 ARG 425 ARG 426 GLU 427 ILE 428 ASN 429 ASN 430 GLU 431 HIS 432 PRO 433 LEU 434 LEU 435 MET 436 MET 437 PRO 438 LEU 439 TYR 440 ALA 441 ASN 442 GLY 443 GLU 444 GLU 445 PHE 446 ASN 447 GLN 448 GLY 449 LYS 450 TYR 451 THR 452 PHE 453 TRP 454 GLY 455 GLY 456 ASP 457 THR 458 LEU 459 THR 460 GLY 461 LYS 462 TRP 463 GLU 464 ASN 465 ILE 466 PRO 467 ASP 468 ASP 469 LEU 470 LYS 471 PRO 472 TYR 473 THR 474 VAL 475 ILE 476 GLN 477 LEU 478 HIS 479 PRO 480 ASP 481 ASP 482 LEU 483 PRO 484 LYS 485 ARG 486 ASP 487 GLY 488 ALA 489 ALA 490 ARG 491 ASP 492 PHE 493 TYR 494 GLU 495 HIS 496 MET 497 LEU 498 GLU 499 GLU 500 ALA 501 ALA 502 LYS 503 TYR 504 VAL 505 ASN 506 PRO 507 LYS 508 THR 509 GLY 510 LYS 511 ASN 512 GLU 513 PRO 514 ILE 515 PRO 516 VAL 517 ILE 518 LEU 519 THR 520 VAL 521 TYR 522 THR 523 ALA 524 GLY 525 ASN 526 MET 527 PRO 528 TYR 529 HIS 530 THR 531 SER 532 ALA 533 HIS 534 TRP 535 LEU 536 SER 537 THR 538 SER 539 TRP 540 ILE 541 ASP 542 LYS 543 MET 544 TYR 545 GLN 546 LYS 547 TYR 548 PRO 549 ASN 550 LEU 551 HIS 552 GLY 553 ILE 554 PHE 555 SER 556 THR 557 ALA 558 SER 559 TYR 560 TRP 561 ILE 562 TRP 563 ALA 564 ASN 565 ASP 566 ILE 567 GLU 568 ASN 569 LYS 570 ALA 571 ALA 572 ASP 573 TYR 574 LEU 575 LYS 576 VAL 577 SER 578 ALA 579 LYS 580 ASN 581 GLY 582 GLY 583 TYR 584 PHE 585 ILE 586 TRP 587 ALA 588 GLU 589 GLN 590 ASN 591 SER 592 GLY 593 SER 594 ALA 595 ILE 596 GLU 597 LYS 598 ALA 599 PHE 600 GLY 601 LYS 602 ASN 603 GLY 604 LYS 605 ILE 606 ALA 607 PHE 608 GLN 609 LYS 610 SER 611 VAL 612 ASP 613 LYS 614 TYR 615 TRP 616 LYS 617 ASN 618 LEU 619 ILE 620 PHE 621 MET 622 PHE 623 LYS 624 ASN 625 THR 626 PRO 627 ALA 628 ALA 629 GLU 630 GLY 631 ASN 632 ASP 633 SER 634 THR 635 THR 636 GLU 637 SER 638 TYR 639 MET 640 LYS 641 GLY 642 LEU 643 TRP 644 LEU 645 SER 646 ASN 647 HIS 648 THR 649 TYR 650 GLN 651 TRP 652 GLY 653 GLY 654 LEU 655 MET 656 ASP 657 THR 658 TRP 659 LYS 660 TRP 661 TYR 662 GLU 663 THR 664 GLY 665 LYS 666 TRP 667 LYS 668 LEU 669 PHE 670 ALA 671 SER 672 GLY 673 ASN 674 ILE 675 GLY 676 LYS 677 SER 678 GLN 679 GLY 680 ASP 681 ARG 682 GLN 683 TRP 684 LEU 685 THR 686 GLU 687 PRO 688 GLU 689 SER 690 MET 691 LEU 692 GLY 693 GLU 694 GLU 695 ALA 696 LEU 697 GLY 698 VAL 699 TYR 700 LEU 701 ASN 702 GLY 703 GLY 704 VAL 705 VAL 706 TYR 707 ASN 708 PHE 709 GLU 710 HIS 711 PRO 712 ALA 713 TYR 714 THR 715 TYR 716 GLY 717 VAL 718 ASN 719 ASN 720 LYS 721 GLU 722 SER 723 LEU 724 LEU 725 PHE 726 SER 727 GLU 728 VAL 729 ILE 730 LYS 731 GLU 732 PHE 733 PHE 734 ARG 735 TYR 736 VAL 737 ILE 738 ALA 739 HIS 740 PRO 741 ALA 742 PRO 743 SER 744 LYS 745 GLU 746 LYS 747 VAL 748 LEU 749 GLU 750 ASP 751 THR 752 LYS 753 VAL 754 PHE 755 ILE 756 HIS 757 GLY 758 ASP 759 TYR 760 SER 761 ASN 762 LYS 763 GLY 764 ASN 765 GLY 766 LYS 767 PHE 768 PHE 769 VAL 770 ASN 771 VAL 772 ASN 773 THR 774 ASP 775 ARG 776 GLU 777 GLN 778 THR 779 PRO 780 LEU 781 TYR 782 MET 783 THR 784 GLY 785 ARG 786 TYR 787 ASN 788 VAL 789 ILE 790 PRO 791 ALA 792 ILE 793 PRO 794 GLY 795 VAL 796 LEU 797 LYS 798 THR 799 ASP 800 LYS 801 LEU 802 LYS 803 GLU 804 SER 805 VAL 806 SER 807 SER 808 SER 809 ARG 810 ILE 811 GLN 812 ILE 813 LYS 814 GLU 815 ILE 816 THR 817 SER 818 PRO 819 GLU 820 PHE 821 SER 822 SER 823 THR 824 GLN 825 ALA 826 ARG 827 LYS 828 GLU 829 TYR 830 LEU 831 ASN 832 LYS 833 LEU 834 TYR 835 PRO 836 MET 837 ASN 838 TYR 839 GLU 840 GLY 841 ASP 842 ILE 843 PHE 844 ALA 845 GLN 846 LYS 847 LEU 848 ASP 849 ASN 850 ARG 851 TRP 852 PHE 853 VAL 854 TYR 855 ASN 856 TYR 857 LYS 858 VAL 859 ASN 860 GLU 861 ASN 862 VAL 863 LYS 864 GLN 865 THR 866 GLY 867 LYS 868 LEU 869 LYS 870 PHE 871 ASN 872 SER 873 LEU 874 GLU 875 MET 876 ASN 877 VAL 878 GLU 879 PHE 880 GLU 881 PRO 882 HIS 883 THR 884 TYR 885 GLY 886 ILE 887 PHE 888 GLU 889 ARG 890 ILE 891 SER 892 ASN 893 GLY 894 LEU 895 LYS 896 VAL 897 ASN 898 LEU 899 ASN 900 ASN 901 PHE 902 ARG 903 THR 904 ASN 905 LYS 906 ASP 907 SER 908 LEU 909 TRP 910 SER 911 ASN 912 ALA 913 GLN 914 ASP 915 ALA 916 ASN 917 GLN 918 ALA 919 LYS 920 LYS 921 LEU 922 PRO 923 GLN 924 LEU 925 THR 926 LYS 927 LYS 928 GLY 929 ALA 930 ILE 931 LYS 932 TRP 933 ILE 934 GLU 935 GLU 936 HIS 937 TYR 938 ILE 939 LYS 940 ASP 941 THR 942 GLN 943 PHE 944 GLY 945 GLU 946 LYS 947 ARG 948 VAL 949 THR 950 LYS 951 ILE 952 VAL 953 LEU 954 ARG 955 GLY 956 ILE 957 ASP 958 LYS 959 LEU 960 PRO 961 THR 962 ILE 963 HIS 964 SER 965 LEU 966 SER 967 GLY 968 THR 969 ASN 970 ASN 971 SER 972 TYR 973 ASP 974 GLN 975 PRO 976 SER 977 LEU 978 ASN 979 PHE 980 ASP 981 GLN 982 LYS 983 ASN 984 HIS 985 MET 986 VAL 987 THR 988 ILE 989 THR 990 ILE 991 ASN 992 SER 993 ASN 994 GLY 995 ASN 996 LEU 997 GLU 998 PHE 999 GLU 1000 LEU 1001 HIS 1002 PHE 1003 LEU 1004 GLU 1005 HIS 1006 THR 1007

Ligands

Unit 2	NAG 1 GAL 2 FUC 3 A2G 4
Unit 3	EDO 2012 EDO 2013