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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE ANAEROBIC RIBONUCLEOTIDE REDUCTASE THERMOTOGA MARITIMA WITH GLYCEROL IN THE ACTIVE SITE
Keywords OXIDOREDUCTASE, RADICAL CHEMISTRY, ALLOSTERIC REGULATION, AN ENZYME
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4COI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE  A 606 4964 0
2  Protein   ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE  B 611 5003 0
3  Ligand   ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE  A 4 0 19
4  Ligand   ANAEROBIC RIBONUCLEOSIDE-TRIPHOSPHATE REDUCTASE  B 3 0 13
5 Water     469 0 469
total       1693 9967 501
Proteins
Unit 1 MET1 LYS2 VAL3 GLN4 TYR5 SER6 PHE7 GLU8 ARG9 GLU10 PHE11 GLU12 GLU13 LEU14 MET15 SER16 ASP17 LEU18 LEU19 SER20 LYS21 TYR22 GLY23 TYR24 GLU25 MET26 PHE27 GLN28 MET29 ASP30 GLY31 LEU32 GLY33 ASP34 GLN35 LEU36 ASP37 VAL38 VAL39 LYS40 PHE41 THR42 GLU43 ASP44 PHE45 VAL46 ARG47 VAL63 THR64 ASN65 ILE66 SER67 THR68 TYR69 PHE70 ILE71 GLU72 ILE73 SER74 LYS75 PRO76 HIS77 THR78 TYR79 LEU80 TYR81 SER82 LEU83 TYR84 ARG85 ILE86 TRP87 GLN88 LYS89 MET90 LYS91 GLU92 MET93 PHE94 GLY95 LYS96 GLY97 VAL98 ALA99 ASP100 GLU101 PHE102 VAL103 GLU104 ALA105 GLN106 ILE107 ASN108 GLY109 ALA110 VAL111 TYR112 LEU113 HIS114 ASP115 ARG116 HIS117 HIS118 ALA119 ALA120 LEU121 MET122 PRO123 TYR124 CYS125 PHE126 ALA127 TYR128 THR129 LEU130 LYS131 PRO132 ILE133 VAL134 GLU135 LYS136 GLY137 LEU138 PRO139 PHE140 ILE141 LYS142 THR143 ILE144 LYS145 SER146 GLU147 PRO148 ALA149 LYS150 HIS151 LEU152 SER153 THR154 PHE155 ILE156 GLN157 HIS158 VAL159 ILE160 GLN161 PHE162 VAL163 MET164 PHE165 ALA166 SER167 ASN168 GLN169 SER170 SER171 GLY172 ALA173 VAL174 GLY175 LEU176 PRO177 ASP178 PHE179 PHE180 VAL181 TRP182 MET183 TRP184 TYR185 PHE186 VAL187 LYS188 LYS189 ASP190 LEU191 LYS192 GLU193 GLY194 ILE195 ILE196 PRO197 ARG198 ASP199 LYS200 LEU201 ASP202 TRP203 TYR204 ILE205 GLU206 GLN207 HIS208 PHE209 GLN210 ILE211 LEU212 THR213 TYR214 SER215 LEU216 ASN217 GLN218 PRO219 ILE220 ARG221 THR222 THR223 GLN224 SER225 PRO226 TYR227 THR228 ASN229 PHE230 THR231 TYR232 LEU233 ASP234 ARG235 ASN236 TYR237 ILE238 LYS239 ALA240 ILE241 PHE242 GLU243 GLY244 GLU245 ARG246 TYR247 PRO248 ASP249 GLY250 SER251 LEU252 ILE253 THR254 ASP255 HIS256 VAL257 GLU258 ASP259 ILE260 ILE261 ALA262 LEU263 GLN264 LYS265 HIS266 TYR267 TRP268 GLU269 TRP270 VAL271 SER272 ARG273 GLU274 ARG275 GLU276 ARG277 GLN278 MET279 PHE280 THR281 PHE282 PRO283 VAL284 LEU285 THR286 ALA287 SER288 LEU289 LEU290 TYR291 LYS292 ASP293 GLY294 LYS295 PHE296 LEU297 ASP298 GLU299 ASP300 SER301 ALA302 ARG303 PHE304 ILE305 ASN306 LYS307 ILE308 ASN309 MET310 LYS311 TRP312 GLN313 ASP314 THR315 ASN316 TRP317 TYR318 ILE319 SER320 ASP321 SER322 ILE323 ASP324 ALA325 VAL326 ALA327 SER328 CYS329 CYS330 ARG331 GLU350 LYS351 LEU352 LYS353 GLY354 ARG355 MET356 ASN357 SER358 ILE359 GLY360 GLY361 SER362 ASP363 LEU364 ASN365 ILE366 GLY367 SER368 PHE369 LYS370 VAL371 ILE372 THR373 VAL374 ASN375 LEU376 PRO377 ARG378 ILE379 ALA380 LEU381 GLU382 SER383 GLY384 GLY385 ASP386 ARG387 GLU388 LYS389 TYR390 LEU391 GLN392 ILE393 LEU394 ARG395 HIS396 ARG397 VAL398 GLN399 LEU400 ILE401 LYS402 LYS403 ALA404 LEU405 ALA406 ALA407 VAL408 ARG409 GLU410 ILE411 ILE412 LYS413 GLU414 ARG415 ILE416 SER417 GLU418 GLY419 LEU420 LEU421 PRO422 LEU423 TYR424 GLU425 ASN426 GLY427 LEU428 MET429 LEU430 LEU431 ASN432 ARG433 GLN434 TYR435 GLY436 THR437 ILE438 GLY439 VAL440 THR441 GLY442 VAL443 TRP444 GLU445 SER446 ALA447 SER448 ILE449 MET450 GLY451 LEU452 THR453 THR454 GLU455 ASP456 ILE457 ASP458 GLY459 LEU460 LYS461 TYR462 THR463 GLU464 GLU465 GLY466 GLU467 VAL468 PHE469 VAL470 ASP471 ASN472 VAL473 LEU474 ASP475 THR476 ILE477 ARG478 GLU479 GLU480 ALA481 GLU482 LYS483 GLY484 TYR485 HIS486 GLU487 TYR488 GLY489 PHE490 THR491 PHE492 ASN493 ILE494 GLU495 GLN496 VAL497 PRO498 ALA499 GLU500 LYS501 ALA502 ALA503 VAL504 THR505 LEU506 ALA507 GLN508 LYS509 ASP510 ARG511 PHE512 LEU513 PHE514 GLY515 GLU516 LYS517 GLN518 PRO519 PHE520 GLU521 ILE522 TYR523 SER524 ASN525 GLN526 TRP527 VAL528 PRO529 LEU530 MET531 ALA532 ASN533 THR534 ASP535 VAL536 LEU537 ASN538 ARG539 ILE540 ARG541 TYR542 SER543 GLY544 LYS545 TRP546 ASP547 LYS548 LYS549 VAL550 SER551 GLY552 GLY553 ALA554 ILE555 LEU556 HIS557 ILE558 ASN559 LEU560 GLY561 GLU562 SER563 PHE564 LYS565 THR566 GLU567 GLU568 GLU569 SER570 PHE571 ASN572 MET573 VAL574 LYS575 MET576 ILE577 ALA578 ASP579 MET580 GLY581 VAL582 MET583 TYR584 PHE585 ALA586 PHE587 ASN588 THR589 LYS590 ILE591 SER592 VAL593 CYS594 GLU595 ASP596 GLY597 HIS598 ALA599 PHE600 TYR601 GLY602 GLU603 ARG604 CYS605 PRO606 VAL607 CYS608 GLY609 LYS610 ALA611 LYS612 VAL613 ASP614 GLU615 TYR616 MET617 ARG618 ILE619 VAL620 GLY621 TYR622 LEU623 VAL624 PRO625 VAL626 SER627 ALA628 PHE629 ASN630 LYS631 GLU632 ARG633 ARG634 GLU635 ILE636 GLU637 TYR638 PRO639
Unit 2 MET1 LYS2 VAL3 GLN4 TYR5 SER6 PHE7 GLU8 ARG9 GLU10 PHE11 GLU12 GLU13 LEU14 MET15 SER16 ASP17 LEU18 LEU19 SER20 LYS21 TYR22 GLY23 TYR24 GLU25 MET26 PHE27 GLN28 MET29 ASP30 GLY31 LEU32 GLY33 ASP34 GLN35 LEU36 ASP37 VAL38 VAL39 LYS40 PHE41 THR42 GLU43 ASP44 PHE45 VAL46 ARG47 ARG48 GLY49 ILE50 ILE51 GLU52 SER53 THR54 ILE55 ASP56 VAL63 THR64 ASN65 ILE66 SER67 THR68 TYR69 PHE70 ILE71 GLU72 ILE73 SER74 LYS75 PRO76 HIS77 THR78 TYR79 LEU80 TYR81 SER82 LEU83 TYR84 ARG85 ILE86 TRP87 GLN88 LYS89 MET90 LYS91 GLU92 MET93 PHE94 GLY95 LYS96 GLY97 VAL98 ALA99 ASP100 GLU101 PHE102 VAL103 GLU104 ALA105 GLN106 ILE107 ASN108 GLY109 ALA110 VAL111 TYR112 LEU113 HIS114 ASP115 ARG116 HIS117 HIS118 ALA119 ALA120 LEU121 MET122 PRO123 TYR124 CYS125 PHE126 ALA127 TYR128 THR129 LEU130 LYS131 PRO132 ILE133 VAL134 GLU135 LYS136 GLY137 LEU138 PRO139 PHE140 ILE141 LYS142 THR143 ILE144 LYS145 SER146 GLU147 PRO148 ALA149 LYS150 HIS151 LEU152 SER153 THR154 PHE155 ILE156 GLN157 HIS158 VAL159 ILE160 GLN161 PHE162 VAL163 MET164 PHE165 ALA166 SER167 ASN168 GLN169 SER170 SER171 GLY172 ALA173 VAL174 GLY175 LEU176 PRO177 ASP178 PHE179 PHE180 VAL181 TRP182 MET183 TRP184 TYR185 PHE186 VAL187 LYS188 LYS189 ASP190 LEU191 LYS192 GLU193 GLY194 ILE195 ILE196 PRO197 ARG198 ASP199 LYS200 LEU201 ASP202 TRP203 TYR204 ILE205 GLU206 GLN207 HIS208 PHE209 GLN210 ILE211 LEU212 THR213 TYR214 SER215 LEU216 ASN217 GLN218 PRO219 ILE220 ARG221 THR222 THR223 GLN224 SER225 PRO226 TYR227 THR228 ASN229 PHE230 THR231 TYR232 LEU233 ASP234 ARG235 ASN236 TYR237 ILE238 LYS239 ALA240 ILE241 PHE242 GLU243 GLY244 GLU245 ARG246 TYR247 PRO248 ASP249 GLY250 SER251 LEU252 ILE253 THR254 ASP255 HIS256 VAL257 GLU258 ASP259 ILE260 ILE261 ALA262 LEU263 GLN264 LYS265 HIS266 TYR267 TRP268 GLU269 TRP270 VAL271 SER272 ARG273 GLU274 ARG275 GLU276 ARG277 GLN278 MET279 PHE280 THR281 PHE282 PRO283 VAL284 LEU285 THR286 ALA287 SER288 LEU289 LEU290 TYR291 LYS292 ASP293 GLY294 LYS295 PHE296 LEU297 ASP298 GLU299 ASP300 SER301 ALA302 ARG303 PHE304 ILE305 ASN306 LYS307 ILE308 ASN309 MET310 LYS311 TRP312 GLN313 ASP314 THR315 ASN316 TRP317 TYR318 ILE319 SER320 ASP321 SER322 ILE323 ASP324 ALA325 VAL326 ALA327 SER328 CYS329 CYS330 GLU350 LYS351 LEU352 LYS353 GLY354 ARG355 MET356 ASN357 SER358 ILE359 GLY360 GLY361 SER362 ASP363 LEU364 ASN365 ILE366 GLY367 SER368 PHE369 LYS370 VAL371 ILE372 THR373 VAL374 ASN375 LEU376 PRO377 ARG378 ILE379 ALA380 LEU381 GLU382 SER383 GLY384 GLY385 ASP386 ARG387 GLU388 LYS389 TYR390 LEU391 GLN392 ILE393 LEU394 ARG395 HIS396 ARG397 VAL398 GLN399 LEU400 ILE401 LYS402 LYS403 ALA404 LEU405 ALA406 ALA407 VAL408 ARG409 GLU410 ILE411 ILE412 LYS413 GLU414 ARG415 ILE416 SER417 GLU418 GLY419 LEU420 LEU421 PRO422 LEU423 TYR424 GLU425 ASN426 GLY427 LEU428 MET429 LEU430 LEU431 ASN432 ARG433 GLN434 TYR435 GLY436 THR437 ILE438 GLY439 VAL440 THR441 GLY442 VAL443 TRP444 GLU445 SER446 ALA447 SER448 ILE449 MET450 GLY451 LEU452 THR453 THR454 GLU455 ASP456 ILE457 ASP458 GLY459 LEU460 LYS461 TYR462 THR463 GLU464 GLU465 GLY466 GLU467 VAL468 PHE469 VAL470 ASP471 ASN472 VAL473 LEU474 ASP475 THR476 ILE477 ARG478 GLU479 GLU480 ALA481 GLU482 LYS483 GLY484 TYR485 HIS486 GLU487 TYR488 GLY489 PHE490 THR491 PHE492 ASN493 ILE494 GLU495 GLN496 VAL497 PRO498 ALA499 GLU500 LYS501 ALA502 ALA503 VAL504 THR505 LEU506 ALA507 GLN508 LYS509 ASP510 ARG511 PHE512 LEU513 PHE514 GLY515 GLU516 LYS517 GLN518 PRO519 PHE520 GLU521 ILE522 TYR523 SER524 ASN525 GLN526 TRP527 VAL528 PRO529 LEU530 MET531 ALA532 ASN533 THR534 ASP535 VAL536 LEU537 ASN538 ARG539 ILE540 ARG541 TYR542 SER543 GLY544 LYS545 TRP546 ASP547 LYS548 LYS549 VAL550 SER551 GLY552 GLY553 ALA554 ILE555 LEU556 HIS557 ILE558 ASN559 LEU560 LYS565 THR566 GLU567 GLU568 GLU569 SER570 PHE571 ASN572 MET573 VAL574 LYS575 MET576 ILE577 ALA578 ASP579 MET580 GLY581 VAL582 MET583 TYR584 PHE585 ALA586 PHE587 ASN588 THR589 LYS590 ILE591 SER592 VAL593 CYS594 GLU595 ASP596 GLY597 HIS598 ALA599 PHE600 TYR601 GLY602 GLU603 ARG604 CYS605 PRO606 VAL607 CYS608 GLY609 LYS610 ALA611 LYS612 VAL613 ASP614 GLU615 TYR616 MET617 ARG618 ILE619 VAL620 GLY621 TYR622 LEU623 VAL624 PRO625 VAL626 SER627 ALA628 PHE629 ASN630 LYS631 GLU632 ARG633 ARG634 GLU635 ILE636 GLU637 TYR638 PRO639 ARG640
Ligands
Unit 3 ZN652 GOL1640 GOL1641 GOL1642
Unit 4 ZN652 GOL1641 GOL1642
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany