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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN 5T4 (WNT-ACTIVATED INHIBITORY FAC TROPHOBLAST GLYCOPROTEIN)
Keywords CELL ADHESION, WAIF1, TPBG, TROVAX, CANCER, SIGNALING, LEUCI REPEATS, WNT/BETA-CATENIN SIGNALING PATHWAY
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4CNC     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TROPHOBLAST GLYCOPROTEIN  A 274 2125 0
2  Protein   TROPHOBLAST GLYCOPROTEIN  B 278 2143 0
3  Ligand    C 2 0 28
4  Ligand    D 2 0 28
5  Ligand   TROPHOBLAST GLYCOPROTEIN  A 14 0 109
6  Ligand   TROPHOBLAST GLYCOPROTEIN  B 14 0 92
7 Water     179 0 179
total       763 4268 436

Proteins
Unit 1 ASP60 GLN61 CYS62 PRO63 ALA64 LEU65 CYS66 GLU67 CYS68 SER69 GLU70 ALA71 ALA72 ARG73 THR74 VAL75 LYS76 CYS77 VAL78 ASN79 ARG80 ASN81 LEU82 THR83 GLU84 VAL85 PRO86 THR87 ASP88 LEU89 PRO90 ALA91 TYR92 VAL93 ARG94 ASN95 LEU96 PHE97 LEU98 THR99 GLY100 ASN101 GLN102 LEU103 ALA104 VAL105 LEU106 PRO107 ALA108 GLY109 ALA110 PHE111 ALA112 ARG113 ARG114 PRO115 PRO116 LEU117 ALA118 GLU119 LEU120 ALA121 ALA122 LEU123 ASN124 LEU125 SER126 GLY127 SER128 ARG129 LEU130 ASP131 GLU132 VAL133 ARG134 ALA135 GLY136 ALA137 PHE138 GLU139 HIS140 LEU141 PRO142 SER143 LEU144 ARG145 GLN146 LEU147 ASP148 LEU149 SER150 HIS151 ASN152 PRO153 LEU154 ALA155 ASP156 LEU157 SER158 PRO159 PHE160 ALA161 PHE162 SER163 SER170 ALA171 PRO172 SER173 PRO174 LEU175 VAL176 GLU177 LEU178 ILE179 LEU180 ASN181 HIS182 ILE183 VAL184 PRO185 PRO186 GLU187 ARG193 SER194 PHE195 GLU196 GLY197 MET198 VAL199 VAL200 ALA201 ALA202 LEU203 LEU204 ALA205 GLY206 ARG207 ALA208 LEU209 GLN210 GLY211 LEU212 ARG213 ARG214 LEU215 GLU216 LEU217 ALA218 SER219 ASN220 HIS221 PHE222 LEU223 TYR224 LEU225 PRO226 ARG227 ASP228 VAL229 LEU230 ALA231 GLN232 LEU233 PRO234 SER235 LEU236 ARG237 HIS238 LEU239 ASP240 LEU241 SER242 ASN243 ASN244 SER245 LEU246 VAL247 SER248 LEU249 THR250 TYR251 VAL252 SER253 PHE254 ARG255 ASN256 LEU257 THR258 HIS259 LEU260 GLU261 SER262 LEU263 HIS264 LEU265 GLU266 ASP267 ASN268 ALA269 LEU270 LYS271 VAL272 LEU273 HIS274 ASN275 GLY276 THR277 LEU278 ALA279 GLU280 LEU281 GLN282 GLY283 LEU284 PRO285 HIS286 ILE287 ARG288 VAL289 PHE290 LEU291 ASP292 ASN293 ASN294 PRO295 TRP296 VAL297 CYS298 ASP299 CYS300 HIS301 MET302 ALA303 ASP304 MET305 VAL306 THR307 TRP308 LEU309 LYS310 GLU311 THR312 GLU313 VAL314 VAL315 GLN316 GLY317 LYS318 ASP319 ARG320 LEU321 THR322 CYS323 ALA324 TYR325 PRO326 GLU327 LYS328 MET329 ARG330 ASN331 ARG332 VAL333 LEU334 LEU335 GLU336 LEU337 ASN338 SER339 ALA340 ASP341 LEU342 ASP343 CYS344
Unit 2 ASP60 GLN61 CYS62 PRO63 ALA64 LEU65 CYS66 GLU67 CYS68 SER69 GLU70 ALA71 ALA72 ARG73 THR74 VAL75 LYS76 CYS77 VAL78 ASN79 ARG80 ASN81 LEU82 THR83 GLU84 VAL85 PRO86 THR87 ASP88 LEU89 PRO90 ALA91 TYR92 VAL93 ARG94 ASN95 LEU96 PHE97 LEU98 THR99 GLY100 ASN101 GLN102 LEU103 ALA104 VAL105 LEU106 PRO107 ALA108 GLY109 ALA110 PHE111 ALA112 ARG113 ARG114 PRO115 PRO116 LEU117 ALA118 GLU119 LEU120 ALA121 ALA122 LEU123 ASN124 LEU125 SER126 GLY127 SER128 ARG129 LEU130 ASP131 GLU132 VAL133 ARG134 ALA135 GLY136 ALA137 PHE138 GLU139 HIS140 LEU141 PRO142 SER143 LEU144 ARG145 GLN146 LEU147 ASP148 LEU149 SER150 HIS151 ASN152 PRO153 LEU154 ALA155 ASP156 LEU157 SER158 PRO159 PHE160 ALA161 PHE162 SER163 GLY164 SER165 ASN166 ALA167 SER168 VAL169 SER170 ALA171 PRO172 SER173 PRO174 LEU175 VAL176 GLU177 LEU178 ILE179 LEU180 ASN181 HIS182 ILE183 VAL184 PRO185 PRO186 SER194 PHE195 GLU196 GLY197 MET198 VAL199 VAL200 ALA201 ALA202 LEU203 LEU204 ALA205 GLY206 ARG207 ALA208 LEU209 GLN210 GLY211 LEU212 ARG213 ARG214 LEU215 GLU216 LEU217 ALA218 SER219 ASN220 HIS221 PHE222 LEU223 TYR224 LEU225 PRO226 ARG227 ASP228 VAL229 LEU230 ALA231 GLN232 LEU233 PRO234 SER235 LEU236 ARG237 HIS238 LEU239 ASP240 LEU241 SER242 ASN243 ASN244 SER245 LEU246 VAL247 SER248 LEU249 THR250 TYR251 VAL252 SER253 PHE254 ARG255 ASN256 LEU257 THR258 HIS259 LEU260 GLU261 SER262 LEU263 HIS264 LEU265 GLU266 ASP267 ASN268 ALA269 LEU270 LYS271 VAL272 LEU273 HIS274 ASN275 GLY276 THR277 LEU278 ALA279 GLU280 LEU281 GLN282 GLY283 LEU284 PRO285 HIS286 ILE287 ARG288 VAL289 PHE290 LEU291 ASP292 ASN293 ASN294 PRO295 TRP296 VAL297 CYS298 ASP299 CYS300 HIS301 MET302 ALA303 ASP304 MET305 VAL306 THR307 TRP308 LEU309 LYS310 GLU311 THR312 GLU313 VAL314 VAL315 GLN316 GLY317 LYS318 ASP319 ARG320 LEU321 THR322 CYS323 ALA324 TYR325 PRO326 GLU327 LYS328 MET329 ARG330 ASN331 ARG332 VAL333 LEU334 LEU335 GLU336 LEU337 ASN338 SER339 ALA340 ASP341 LEU342 ASP343 CYS344

Ligands
Unit 3 NAG1 NAG2
Unit 4 NAG1 NAG2
Unit 5 NAG1345 NAG1348 NAG1349 NAG1350 PEG1351 GOL1352 SO41353 SO41354 SO41355 SO41356 SO41357 SO41358 SO41359 SO41360
Unit 6 NAG1347 NAG1348 PEG1349 PEG1350 PEG1351 GOL1352 GOL1353 SO41354 SO41355 SO41356 SO41357 SO41358 SO41359 NA1360

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany