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Sequence, Chains, Asymmetric and Biological Units

Title HIGH-SALT CRYSTAL STRUCTURE OF A THROMBIN-GPIBALPHA PEPTIDE
Keywords HYDROLASE-PEPTIDE COMPLEX, COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4CH8     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   THROMBIN, LIGHT CHAIN  A 26 184 0
2  Protein   THROMBIN, HEAVY CHAIN  B 249 1956 0
3  Protein   THROMBIN, LIGHT CHAIN  C 32 243 0
4  Protein   THROMBIN, HEAVY CHAIN  D 252 1998 0
5  Protein   THROMBIN, LIGHT CHAIN  E 26 202 0
6  Protein   THROMBIN, HEAVY CHAIN  F 253 1977 0
7  Protein   THROMBIN, LIGHT CHAIN  G 27 216 0
8  Protein   THROMBIN, HEAVY CHAIN  H 259 2016 0
9  Protein    P 3 16 16
10  Protein    Q 4 24 16
11  Protein    R 3 16 16
12  Protein    S 3 16 16
13  Ligand   THROMBIN, HEAVY CHAIN  B 3 0 37
14  Ligand   THROMBIN, HEAVY CHAIN  D 2 0 31
15  Ligand   THROMBIN, HEAVY CHAIN  F 3 0 37
16  Ligand   THROMBIN, HEAVY CHAIN  H 2 0 31
17 Water     424 0 424
total       1571 8864 624
Proteins
Unit 1 ASP292 CYS293 GLY294 LEU295 ARG296 PRO297 LEU298 PHE299 GLU300 LYS301 LYS302 SER303 LEU304 GLU305 ASP306 LYS307 THR308 GLU309 ARG310 GLU311 LEU312 LEU313 GLU314 SER315 TYR316 ILE317
Unit 2 ILE321 VAL322 GLU323 GLY324 SER325 ASP326 ALA327 GLU328 ILE329 GLY330 MET331 SER332 PRO333 TRP334 GLN335 VAL336 MET337 LEU338 PHE339 ARG340 LYS341 SER342 PRO343 GLN344 GLU345 LEU346 LEU347 CYS348 GLY349 ALA350 SER351 LEU352 ILE353 SER354 ASP355 ARG356 TRP357 VAL358 LEU359 THR360 ALA361 ALA362 HIS363 CYS364 LEU365 LEU366 TYR367 PRO368 PRO369 TRP370 ASP371 LYS372 ASN373 PHE374 THR375 GLU376 ASN377 ASP378 LEU379 LEU380 VAL381 ARG382 ILE383 GLY384 LYS385 HIS386 SER387 ARG388 THR389 ARG390 TYR391 GLU392 ARG393 ASN394 ILE395 GLU396 LYS397 ILE398 SER399 MET400 LEU401 GLU402 LYS403 ILE404 TYR405 ILE406 HIS407 PRO408 ARG409 TYR410 ASN411 TRP412 ARG413 GLU414 ASN415 LEU416 ASP417 ARG418 ASP419 ILE420 ALA421 LEU422 MET423 LYS424 LEU425 LYS426 LYS427 PRO428 VAL429 ALA430 PHE431 SER432 ASP433 TYR434 ILE435 HIS436 PRO437 VAL438 CYS439 LEU440 PRO441 ASP442 ARG443 GLU444 THR445 ALA446 ALA447 SER448 LEU449 LEU450 GLN451 ALA452 GLY453 TYR454 LYS455 GLY456 ARG457 VAL458 THR459 GLY460 TRP461 GLY462 ASN463 LEU464 LYS465 GLU466 GLY475 GLN476 PRO477 SER478 VAL479 LEU480 GLN481 VAL482 VAL483 ASN484 LEU485 PRO486 ILE487 VAL488 GLU489 ARG490 PRO491 VAL492 CYS493 LYS494 ASP495 SER496 THR497 ARG498 ILE499 ARG500 ILE501 THR502 ASP503 ASN504 MET505 PHE506 CYS507 ALA508 GLY509 TYR510 LYS511 PRO512 ASP513 GLU514 GLY515 LYS516 ARG517 GLY518 ASP519 ALA520 CYS521 GLU522 GLY523 ASP524 SER525 GLY526 GLY527 PRO528 PHE529 VAL530 MET531 LYS532 SER533 PRO534 PHE535 ASN536 ASN537 ARG538 TRP539 TYR540 GLN541 MET542 GLY543 ILE544 VAL545 SER546 TRP547 GLY548 GLU549 GLY550 CYS551 ASP552 ARG553 ASP554 GLY555 LYS556 TYR557 GLY558 PHE559 TYR560 THR561 HIS562 VAL563 PHE564 ARG565 LEU566 LYS567 LYS568 TRP569 ILE570 GLN571 LYS572 VAL573 ILE574 ASP575 GLN576 PHE577
Unit 3 GLY287 SER288 GLY289 GLU290 ALA291 ASP292 CYS293 GLY294 LEU295 ARG296 PRO297 LEU298 PHE299 GLU300 LYS301 LYS302 SER303 LEU304 GLU305 ASP306 LYS307 THR308 GLU309 ARG310 GLU311 LEU312 LEU313 GLU314 SER315 TYR316 ILE317 ASP318
Unit 4 ILE321 VAL322 GLU323 GLY324 SER325 ASP326 ALA327 GLU328 ILE329 GLY330 MET331 SER332 PRO333 TRP334 GLN335 VAL336 MET337 LEU338 PHE339 ARG340 LYS341 SER342 PRO343 GLN344 GLU345 LEU346 LEU347 CYS348 GLY349 ALA350 SER351 LEU352 ILE353 SER354 ASP355 ARG356 TRP357 VAL358 LEU359 THR360 ALA361 ALA362 HIS363 CYS364 LEU365 LEU366 TYR367 PRO368 PRO369 TRP370 ASP371 LYS372 ASN373 PHE374 THR375 GLU376 ASN377 ASP378 LEU379 LEU380 VAL381 ARG382 ILE383 GLY384 LYS385 HIS386 SER387 ARG388 THR389 ARG390 TYR391 GLU392 ARG393 ASN394 ILE395 GLU396 LYS397 ILE398 SER399 MET400 LEU401 GLU402 LYS403 ILE404 TYR405 ILE406 HIS407 PRO408 ARG409 TYR410 ASN411 TRP412 ARG413 GLU414 ASN415 LEU416 ASP417 ARG418 ASP419 ILE420 ALA421 LEU422 MET423 LYS424 LEU425 LYS426 LYS427 PRO428 VAL429 ALA430 PHE431 SER432 ASP433 TYR434 ILE435 HIS436 PRO437 VAL438 CYS439 LEU440 PRO441 ASP442 ARG443 GLU444 THR445 ALA446 ALA447 SER448 LEU449 LEU450 GLN451 ALA452 GLY453 TYR454 LYS455 GLY456 ARG457 VAL458 THR459 GLY460 TRP461 GLY462 ASN463 LEU464 LYS465 GLU466 THR467 GLY475 GLN476 PRO477 SER478 VAL479 LEU480 GLN481 VAL482 VAL483 ASN484 LEU485 PRO486 ILE487 VAL488 GLU489 ARG490 PRO491 VAL492 CYS493 LYS494 ASP495 SER496 THR497 ARG498 ILE499 ARG500 ILE501 THR502 ASP503 ASN504 MET505 PHE506 CYS507 ALA508 GLY509 TYR510 LYS511 PRO512 ASP513 GLU514 GLY515 LYS516 ARG517 GLY518 ASP519 ALA520 CYS521 GLU522 GLY523 ASP524 SER525 GLY526 GLY527 PRO528 PHE529 VAL530 MET531 LYS532 SER533 PRO534 PHE535 ASN536 ASN537 ARG538 TRP539 TYR540 GLN541 MET542 GLY543 ILE544 VAL545 SER546 TRP547 GLY548 GLU549 GLY550 CYS551 ASP552 ARG553 ASP554 GLY555 LYS556 TYR557 GLY558 PHE559 TYR560 THR561 HIS562 VAL563 PHE564 ARG565 LEU566 LYS567 LYS568 TRP569 ILE570 GLN571 LYS572 VAL573 ILE574 ASP575 GLN576 PHE577 GLY578 GLU579
Unit 5 ALA291 ASP292 CYS293 GLY294 LEU295 ARG296 PRO297 LEU298 PHE299 GLU300 LYS301 LYS302 SER303 LEU304 GLU305 ASP306 LYS307 THR308 GLU309 ARG310 GLU311 LEU312 LEU313 GLU314 SER315 TYR316
Unit 6 ILE321 VAL322 GLU323 GLY324 SER325 ASP326 ALA327 GLU328 ILE329 GLY330 MET331 SER332 PRO333 TRP334 GLN335 VAL336 MET337 LEU338 PHE339 ARG340 LYS341 SER342 PRO343 GLN344 GLU345 LEU346 LEU347 CYS348 GLY349 ALA350 SER351 LEU352 ILE353 SER354 ASP355 ARG356 TRP357 VAL358 LEU359 THR360 ALA361 ALA362 HIS363 CYS364 LEU365 LEU366 TYR367 PRO368 PRO369 TRP370 ASP371 LYS372 ASN373 PHE374 THR375 GLU376 ASN377 ASP378 LEU379 LEU380 VAL381 ARG382 ILE383 GLY384 LYS385 HIS386 SER387 GLU392 ARG393 ASN394 ILE395 GLU396 LYS397 ILE398 SER399 MET400 LEU401 GLU402 LYS403 ILE404 TYR405 ILE406 HIS407 PRO408 ARG409 TYR410 ASN411 TRP412 ARG413 GLU414 ASN415 LEU416 ASP417 ARG418 ASP419 ILE420 ALA421 LEU422 MET423 LYS424 LEU425 LYS426 LYS427 PRO428 VAL429 ALA430 PHE431 SER432 ASP433 TYR434 ILE435 HIS436 PRO437 VAL438 CYS439 LEU440 PRO441 ASP442 ARG443 GLU444 THR445 ALA446 ALA447 SER448 LEU449 LEU450 GLN451 ALA452 GLY453 TYR454 LYS455 GLY456 ARG457 VAL458 THR459 GLY460 TRP461 GLY462 ASN463 LEU464 LYS465 GLU466 THR467 TRP468 THR469 ALA470 ASN471 VAL472 GLY473 LYS474 GLY475 GLN476 PRO477 SER478 VAL479 LEU480 GLN481 VAL482 VAL483 ASN484 LEU485 PRO486 ILE487 VAL488 GLU489 ARG490 PRO491 VAL492 CYS493 LYS494 ASP495 SER496 THR497 ARG498 ILE499 ARG500 ILE501 THR502 ASP503 ASN504 MET505 PHE506 CYS507 ALA508 GLY509 TYR510 LYS511 PRO512 ASP513 GLU514 GLY515 LYS516 ARG517 GLY518 ASP519 ALA520 CYS521 GLU522 GLY523 ASP524 SER525 GLY526 GLY527 PRO528 PHE529 VAL530 MET531 LYS532 SER533 PRO534 PHE535 ASN536 ASN537 ARG538 TRP539 TYR540 GLN541 MET542 GLY543 ILE544 VAL545 SER546 TRP547 GLY548 GLU549 GLY550 CYS551 ASP552 ARG553 ASP554 GLY555 LYS556 TYR557 GLY558 PHE559 TYR560 THR561 HIS562 VAL563 PHE564 ARG565 LEU566 LYS567 LYS568 TRP569 ILE570 GLN571 LYS572 VAL573 ILE574 ASP575 GLN576 PHE577
Unit 7 ASP292 CYS293 GLY294 LEU295 ARG296 PRO297 LEU298 PHE299 GLU300 LYS301 LYS302 SER303 LEU304 GLU305 ASP306 LYS307 THR308 GLU309 ARG310 GLU311 LEU312 LEU313 GLU314 SER315 TYR316 ILE317 ASP318
Unit 8 ILE321 VAL322 GLU323 GLY324 SER325 ASP326 ALA327 GLU328 ILE329 GLY330 MET331 SER332 PRO333 TRP334 GLN335 VAL336 MET337 LEU338 PHE339 ARG340 LYS341 SER342 PRO343 GLN344 GLU345 LEU346 LEU347 CYS348 GLY349 ALA350 SER351 LEU352 ILE353 SER354 ASP355 ARG356 TRP357 VAL358 LEU359 THR360 ALA361 ALA362 HIS363 CYS364 LEU365 LEU366 TYR367 PRO368 PRO369 TRP370 ASP371 LYS372 ASN373 PHE374 THR375 GLU376 ASN377 ASP378 LEU379 LEU380 VAL381 ARG382 ILE383 GLY384 LYS385 HIS386 SER387 ARG388 THR389 ARG390 TYR391 GLU392 ARG393 ASN394 ILE395 GLU396 LYS397 ILE398 SER399 MET400 LEU401 GLU402 LYS403 ILE404 TYR405 ILE406 HIS407 PRO408 ARG409 TYR410 ASN411 TRP412 ARG413 GLU414 ASN415 LEU416 ASP417 ARG418 ASP419 ILE420 ALA421 LEU422 MET423 LYS424 LEU425 LYS426 LYS427 PRO428 VAL429 ALA430 PHE431 SER432 ASP433 TYR434 ILE435 HIS436 PRO437 VAL438 CYS439 LEU440 PRO441 ASP442 ARG443 GLU444 THR445 ALA446 ALA447 SER448 LEU449 LEU450 GLN451 ALA452 GLY453 TYR454 LYS455 GLY456 ARG457 VAL458 THR459 GLY460 TRP461 GLY462 ASN463 LEU464 LYS465 GLU466 THR467 TRP468 THR469 ALA470 ASN471 VAL472 GLY473 LYS474 GLY475 GLN476 PRO477 SER478 VAL479 LEU480 GLN481 VAL482 VAL483 ASN484 LEU485 PRO486 ILE487 VAL488 GLU489 ARG490 PRO491 VAL492 CYS493 LYS494 ASP495 SER496 THR497 ARG498 ILE499 ARG500 ILE501 THR502 ASP503 ASN504 MET505 PHE506 CYS507 ALA508 GLY509 TYR510 LYS511 PRO512 ASP513 GLU514 GLY515 LYS516 ARG517 GLY518 ASP519 ALA520 CYS521 GLU522 GLY523 ASP524 SER525 GLY526 GLY527 PRO528 PHE529 VAL530 MET531 LYS532 SER533 PRO534 PHE535 ASN536 ASN537 ARG538 TRP539 TYR540 GLN541 MET542 GLY543 ILE544 VAL545 SER546 TRP547 GLY548 GLU549 GLY550 CYS551 ASP552 ARG553 ASP554 GLY555 LYS556 TYR557 GLY558 PHE559 TYR560 THR561 HIS562 VAL563 PHE564 ARG565 LEU566 LYS567 LYS568 TRP569 ILE570 GLN571 LYS572 VAL573 ILE574 ASP575 GLN576 PHE577 GLY578 GLU579
Unit 9 LEU275 PTR276 ASP277
Unit 10 ASP274 LEU275 PTR276 ASP277
Unit 11 LEU275 PTR276 ASP277
Unit 12 LEU275 PTR276 ASP277
Ligands
Unit 13 NA1578 0G61579 GOL1580
Unit 14 NA1580 0G61581
Unit 15 NA1578 0G61579 GOL1580
Unit 16 NA1580 0G61581
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany