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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF A RARE, NON-STANDARD SEQUENCE K-TURN BOUND BY L7AE PROTEIN
Keywords RNA BINDING PROTEIN-RNA COMPLEX, RNA BINDING PROTEIN, KINK T
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4C4W     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  A 96 771 0
2  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  B 95 767 0
3  Protein   50S RIBOSOMAL PROTEIN L7AE  C 115 886 0
4  RNA    D 35 743 0
5  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  E 97 784 0
6  Protein   U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A  F 96 770 0
7  Protein   50S RIBOSOMAL PROTEIN L7AE  G 117 900 0
8  RNA    H 35 743 0
9  Ligand   TSKT-23  D 1 0 5
10  Ligand   TSKT-23  H 1 0 5
total       688 6364 10
Proteins
Unit 1 THR6 ARG7 PRO8 ASN9 HIS10 THR11 ILE12 TYR13 ILE14 ASN15 ASN16 LEU17 ASN18 GLU19 LYS20 ILE21 LYS22 LYS23 ASP24 GLU25 LEU26 LYS27 LYS28 SER29 LEU30 TYR31 ALA32 ILE33 PHE34 SER35 GLN36 PHE37 GLY38 GLN39 ILE40 LEU41 ASP42 ILE43 LEU44 VAL45 SER46 ARG47 SER48 LEU49 LYS50 MET51 ARG52 GLY53 GLN54 ALA55 PHE56 VAL57 ILE58 PHE59 LYS60 GLU61 VAL62 SER63 SER64 ALA65 THR66 ASN67 ALA68 LEU69 ARG70 SER71 MET72 GLN73 GLY74 PHE75 PRO76 PHE77 TYR78 ASP79 LYS80 PRO81 MET82 ARG83 ILE84 GLN85 TYR86 ALA87 LYS88 THR89 ASP90 SER91 ASP92 ILE93 ILE94 ALA95 LYS96 MET97 LYS98 GLY99 THR100 PHE101
Unit 2 ARG7 PRO8 ASN9 HIS10 THR11 ILE12 TYR13 ILE14 ASN15 ASN16 LEU17 ASN18 GLU19 LYS20 ILE21 LYS22 LYS23 ASP24 GLU25 LEU26 LYS27 LYS28 SER29 LEU30 TYR31 ALA32 ILE33 PHE34 SER35 GLN36 PHE37 GLY38 GLN39 ILE40 LEU41 ASP42 ILE43 LEU44 VAL45 SER46 ARG47 SER48 LEU49 LYS50 MET51 ARG52 GLY53 GLN54 ALA55 PHE56 VAL57 ILE58 PHE59 LYS60 GLU61 VAL62 SER63 SER64 ALA65 THR66 ASN67 ALA68 LEU69 ARG70 SER71 MET72 GLN73 GLY74 PHE75 PRO76 PHE77 TYR78 ASP79 LYS80 PRO81 MET82 ARG83 ILE84 GLN85 TYR86 ALA87 LYS88 THR89 ASP90 SER91 ASP92 ILE93 ILE94 ALA95 LYS96 MET97 LYS98 GLY99 THR100 PHE101
Unit 3 VAL3 ARG4 PHE5 GLU6 VAL7 PRO8 GLU9 ASP10 MET11 GLN12 ASN13 GLU14 ALA15 LEU16 SER17 LEU18 LEU19 GLU20 LYS21 VAL22 ARG23 GLU24 SER25 GLY26 LYS27 VAL28 LYS29 LYS30 GLY31 THR32 ASN33 GLU34 THR35 THR36 LYS37 ALA38 VAL39 GLU40 ARG41 GLY42 LEU43 ALA44 LYS45 LEU46 VAL47 TYR48 ILE49 ALA50 GLU51 ASP52 VAL53 ASP54 PRO55 PRO56 GLU57 ILE58 VAL59 ALA60 HIS61 LEU62 PRO63 LEU64 LEU65 CYS66 GLU67 GLU68 LYS69 ASN70 VAL71 PRO72 TYR73 ILE74 TYR75 VAL76 LYS77 SER78 LYS79 ASN80 ASP81 LEU82 GLY83 ARG84 ALA85 VAL86 GLY87 ILE88 GLU89 VAL90 PRO91 CYS92 ALA93 SER94 ALA95 ALA96 ILE97 ILE98 ASN99 GLU100 GLY101 GLU102 LEU103 ARG104 LYS105 GLU106 LEU107 GLY108 SER109 LEU110 VAL111 GLU112 LYS113 ILE114 LYS115 GLY116 LEU117
Unit 5 THR6 ARG7 PRO8 ASN9 HIS10 THR11 ILE12 TYR13 ILE14 ASN15 ASN16 LEU17 ASN18 GLU19 LYS20 ILE21 LYS22 LYS23 ASP24 GLU25 LEU26 LYS27 LYS28 SER29 LEU30 TYR31 ALA32 ILE33 PHE34 SER35 GLN36 PHE37 GLY38 GLN39 ILE40 LEU41 ASP42 ILE43 LEU44 VAL45 SER46 ARG47 SER48 LEU49 LYS50 MET51 ARG52 GLY53 GLN54 ALA55 PHE56 VAL57 ILE58 PHE59 LYS60 GLU61 VAL62 SER63 SER64 ALA65 THR66 ASN67 ALA68 LEU69 ARG70 SER71 MET72 GLN73 GLY74 PHE75 PRO76 PHE77 TYR78 ASP79 LYS80 PRO81 MET82 ARG83 ILE84 GLN85 TYR86 ALA87 LYS88 THR89 ASP90 SER91 ASP92 ILE93 ILE94 ALA95 LYS96 MET97 LYS98 GLY99 THR100 PHE101 VAL102
Unit 6 ARG7 PRO8 ASN9 HIS10 THR11 ILE12 TYR13 ILE14 ASN15 ASN16 LEU17 ASN18 GLU19 LYS20 ILE21 LYS22 LYS23 ASP24 GLU25 LEU26 LYS27 LYS28 SER29 LEU30 TYR31 ALA32 ILE33 PHE34 SER35 GLN36 PHE37 GLY38 GLN39 ILE40 LEU41 ASP42 ILE43 LEU44 VAL45 SER46 ARG47 SER48 LEU49 LYS50 MET51 ARG52 GLY53 GLN54 ALA55 PHE56 VAL57 ILE58 PHE59 LYS60 GLU61 VAL62 SER63 SER64 ALA65 THR66 ASN67 ALA68 LEU69 ARG70 SER71 MET72 GLN73 GLY74 PHE75 PRO76 PHE77 TYR78 ASP79 LYS80 PRO81 MET82 ARG83 ILE84 GLN85 TYR86 ALA87 LYS88 THR89 ASP90 SER91 ASP92 ILE93 ILE94 ALA95 LYS96 MET97 LYS98 GLY99 THR100 PHE101 VAL102
Unit 7 SER1 TYR2 VAL3 ARG4 PHE5 GLU6 VAL7 PRO8 GLU9 ASP10 MET11 GLN12 ASN13 GLU14 ALA15 LEU16 SER17 LEU18 LEU19 GLU20 LYS21 VAL22 ARG23 GLU24 SER25 GLY26 LYS27 VAL28 LYS29 LYS30 GLY31 THR32 ASN33 GLU34 THR35 THR36 LYS37 ALA38 VAL39 GLU40 ARG41 GLY42 LEU43 ALA44 LYS45 LEU46 VAL47 TYR48 ILE49 ALA50 GLU51 ASP52 VAL53 ASP54 PRO55 PRO56 GLU57 ILE58 VAL59 ALA60 HIS61 LEU62 PRO63 LEU64 LEU65 CYS66 GLU67 GLU68 LYS69 ASN70 VAL71 PRO72 TYR73 ILE74 TYR75 VAL76 LYS77 SER78 LYS79 ASN80 ASP81 LEU82 GLY83 ARG84 ALA85 VAL86 GLY87 ILE88 GLU89 VAL90 PRO91 CYS92 ALA93 SER94 ALA95 ALA96 ILE97 ILE98 ASN99 GLU100 GLY101 GLU102 LEU103 ARG104 LYS105 GLU106 LEU107 GLY108 SER109 LEU110 VAL111 GLU112 LYS113 ILE114 LYS115 GLY116 LEU117
Nucleic acids
Unit 4 G1 A2 G3 C4 A5 A6 G7 A8 G9 C10 C11 A12 U13 U14 G15 C16 A17 C18 U19 C20 C21 G22 G23 U24 U25 U26 G27 A28 U29 G30 A31 C32 C33 U34 C35
Unit 8 G1 A2 G3 C4 A5 A6 G7 A8 G9 C10 C11 A12 U13 U14 G15 C16 A17 C18 U19 C20 C21 G22 G23 U24 U25 U26 G27 A28 U29 G30 A31 C32 C33 U34 C35
Ligands
Unit 9 2HP1036
Unit 10 2HP1036
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany