4C2U - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS UVRD IN COMPLEX DNA, FORM 1
• Keywords: HYDROLASE-DNA COMPLEX, DNA REPAIR, DNA HELICASES, NUCLEOTIDE EXCISION REPAIR
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4C2U	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA HELICASE II	A	658	5164	0
2	Protein	DNA HELICASE II	D	658	5164	0
3	Other macromolecule	REV25	X	24	487	0
4	Other macromolecule	FOR25	Y	23	469	0
5	Ligand	DNA HELICASE II	A	6	0	47
6	Ligand	DNA HELICASE II	D	6	0	47
7	Water			186	0	186
total				1561	11284	280

Proteins

Unit 1

SER 4 ALA 5 GLY 6 PRO 7 ASP 8 LEU 9 LEU 10 GLN 11 ALA 12 LEU 13 ASN 14 PRO 15 THR 16 GLN 17 ALA 18 GLN 19 ALA 20 ALA 21 ASP 22 HIS 23 PHE 24 THR 25 GLY 26 PRO 27 ALA 28 LEU 29 VAL 30 ILE 31 ALA 32 GLY 33 ALA 34 GLY 35 SER 36 GLY 37 LYS 38 THR 39 ARG 40 THR 41 LEU 42 ILE 43 TYR 44 ARG 45 ILE 46 ALA 47 HIS 48 LEU 49 ILE 50 GLY 51 HIS 52 TYR 53 GLY 54 VAL 55 HIS 56 PRO 57 GLY 58 GLU 59 ILE 60 LEU 61 ALA 62 VAL 63 THR 64 PHE 65 THR 66 ASN 67 LYS 68 ALA 69 ALA 70 ALA 71 GLU 72 MET 73 ARG 74 GLU 75 ARG 76 ALA 77 GLY 78 HIS 79 LEU 80 VAL 81 PRO 82 GLY 83 ALA 84 GLY 85 ASP 86 LEU 87 TRP 88 MET 89 SER 90 THR 91 PHE 92 HIS 93 SER 94 ALA 95 GLY 96 VAL 97 ARG 98 ILE 99 LEU 100 ARG 101 THR 102 TYR 103 GLY 104 GLU 105 HIS 106 ILE 107 GLY 108 LEU 109 ARG 110 ARG 111 GLY 112 PHE 113 VAL 114 ILE 115 TYR 116 ASP 117 ASP 118 ASP 119 ASP 120 GLN 121 LEU 122 ASP 123 ILE 124 ILE 125 LYS 126 GLU 127 VAL 128 MET 129 GLY 130 SER 131 ILE 132 PRO 133 GLY 134 GLU 138 THR 139 GLN 140 PRO 141 ARG 142 VAL 143 ILE 144 ARG 145 GLY 146 ILE 147 ILE 148 ASP 149 ARG 150 ALA 151 LYS 152 SER 153 ASN 154 LEU 155 TRP 156 THR 157 PRO 158 ASP 159 ASP 160 LEU 161 ASP 162 ARG 163 SER 164 ARG 165 GLU 166 PRO 167 PHE 168 ILE 169 SER 170 GLY 171 LEU 172 PRO 173 ARG 174 ASP 175 ALA 176 ALA 177 ALA 178 GLU 179 ALA 180 TYR 181 ARG 182 ARG 183 TYR 184 GLU 185 VAL 186 ARG 187 LYS 188 LYS 189 GLY 190 GLN 191 ASN 192 ALA 193 ILE 194 ASP 195 PHE 196 GLY 197 ASP 198 LEU 199 ILE 200 THR 201 GLU 202 THR 203 VAL 204 ARG 205 LEU 206 PHE 207 LYS 208 GLU 209 VAL 210 PRO 211 GLY 212 VAL 213 LEU 214 ASP 215 LYS 216 VAL 217 GLN 218 ASN 219 LYS 220 ALA 221 LYS 222 PHE 223 ILE 224 HIS 225 VAL 226 ASP 227 GLU 228 TYR 229 GLN 230 ASP 231 THR 232 ASN 233 ARG 234 ALA 235 GLN 236 TYR 237 GLU 238 LEU 239 THR 240 ARG 241 LEU 242 LEU 243 ALA 244 SER 245 ARG 246 ASP 247 ARG 248 ASN 249 LEU 250 LEU 251 VAL 252 VAL 253 GLY 254 ASP 255 PRO 256 ASP 257 GLN 258 SER 259 ILE 260 TYR 261 LYS 262 PHE 263 ARG 264 GLY 265 ALA 266 ASP 267 ILE 268 GLN 269 ASN 270 ILE 271 LEU 272 ASP 273 PHE 274 GLN 275 LYS 276 ASP 277 TYR 278 PRO 279 ASP 280 ALA 281 LYS 282 VAL 283 TYR 284 MET 285 LEU 286 GLU 287 HIS 288 ASN 289 TYR 290 ARG 291 SER 292 SER 293 ALA 294 ARG 295 VAL 296 LEU 297 GLU 298 ALA 299 ALA 300 ASN 301 LYS 302 LEU 303 ILE 304 GLU 305 ASN 306 ASN 307 THR 308 GLU 309 ARG 310 LEU 311 ASP 312 LYS 313 THR 314 LEU 315 LYS 316 PRO 317 VAL 318 LYS 319 GLU 320 ALA 321 GLY 322 GLN 323 PRO 324 VAL 325 THR 326 PHE 327 HIS 328 ARG 329 ALA 330 THR 331 ASP 332 HIS 333 ARG 334 ALA 335 GLU 336 GLY 337 ASP 338 TYR 339 VAL 340 ALA 341 ASP 342 TRP 343 LEU 344 THR 345 ARG 346 LEU 347 HIS 348 GLY 349 GLU 350 GLY 351 ARG 352 ALA 353 TRP 354 SER 355 GLU 356 MET 357 ALA 358 ILE 359 LEU 360 TYR 361 ARG 362 THR 363 ASN 364 ALA 365 GLN 366 SER 367 ARG 368 VAL 369 ILE 370 GLU 371 GLU 372 SER 373 LEU 374 ARG 375 ARG 376 VAL 377 GLN 378 ILE 379 PRO 380 ALA 381 ARG 382 ILE 383 VAL 384 GLY 385 GLY 386 VAL 387 GLY 388 PHE 389 TYR 390 ASP 391 ARG 392 ARG 393 GLU 394 ILE 395 ARG 396 ASP 397 ILE 398 LEU 399 ALA 400 TYR 401 ALA 402 ARG 403 LEU 404 ALA 405 LEU 406 ASN 407 PRO 408 ALA 409 ASP 410 ASP 411 VAL 412 ALA 413 LEU 414 ARG 415 ARG 416 ILE 417 ILE 418 GLY 419 ARG 420 PRO 421 ARG 422 ARG 423 GLY 424 ILE 425 GLY 426 ASP 427 THR 428 ALA 429 LEU 430 GLN 431 LYS 432 LEU 433 MET 434 GLU 435 TRP 436 ALA 437 ARG 438 THR 439 HIS 440 HIS 441 THR 442 SER 443 VAL 444 LEU 445 THR 446 ALA 447 CYS 448 ALA 449 ASN 450 ALA 451 ALA 452 GLU 453 GLN 454 ASN 455 ILE 456 LEU 457 ASP 458 ARG 459 GLY 460 ALA 461 HIS 462 LYS 463 ALA 464 THR 465 GLU 466 PHE 467 ALA 468 GLY 469 LEU 470 MET 471 GLU 472 ALA 473 MET 474 SER 475 GLU 476 ALA 477 ALA 478 ASP 479 ASN 480 TYR 481 GLU 482 PRO 483 ALA 484 ALA 485 PHE 486 LEU 487 ARG 488 PHE 489 VAL 490 MET 491 GLU 492 THR 493 SER 494 GLY 495 TYR 496 LEU 497 ASP 498 LEU 499 LEU 500 ARG 501 GLN 502 GLU 503 GLY 504 GLN 505 GLU 506 GLY 507 GLN 508 VAL 509 ARG 510 LEU 511 GLU 512 ASN 513 LEU 514 GLU 515 GLU 516 LEU 517 VAL 518 SER 519 ALA 520 ALA 521 GLU 522 GLU 523 TRP 524 SER 525 GLN 526 ASP 527 GLU 528 ALA 529 ASN 530 VAL 531 GLY 532 GLY 533 SER 534 ILE 535 ALA 536 ASP 537 PHE 538 LEU 539 ASP 540 ASP 541 ALA 542 ALA 543 LEU 544 LEU 545 SER 546 SER 547 VAL 548 ASP 549 ASP 550 MET 551 ARG 552 THR 553 LYS 554 ALA 555 GLU 556 ASN 557 LYS 558 GLY 559 ALA 560 PRO 561 GLU 562 ASP 563 ALA 564 VAL 565 THR 566 LEU 567 MET 568 THR 569 LEU 570 HIS 571 ASN 572 ALA 573 LYS 574 GLY 575 LEU 576 GLU 577 PHE 578 PRO 579 VAL 580 VAL 581 PHE 582 ILE 583 VAL 584 GLY 585 VAL 586 GLU 587 GLN 588 GLY 589 LEU 590 LEU 591 PRO 592 SER 593 LYS 594 GLY 595 ALA 596 ILE 597 ALA 598 GLU 599 GLY 600 PRO 601 SER 602 GLY 603 ILE 604 GLU 605 GLU 606 GLU 607 ARG 608 ARG 609 LEU 610 PHE 611 TYR 612 VAL 613 GLY 614 ILE 615 THR 616 ARG 617 ALA 618 MET 619 GLU 620 ARG 621 LEU 622 LEU 623 MET 624 THR 625 ALA 626 ALA 627 GLN 628 ASN 629 ARG 630 MET 631 GLN 632 PHE 633 GLY 634 LYS 635 THR 636 ASN 637 ALA 638 ALA 639 GLU 640 ASP 641 SER 642 ALA 643 PHE 644 LEU 645 GLU 646 ASP 647 ILE 648 GLU 649 GLY 650 LEU 651 PHE 652 ASP 653 THR 654 VAL 655 ASP 656 PRO 657 TYR 658 GLY 659 GLN 660 PRO 661 ILE 662 GLU 663 TYR 664

Unit 2

SER 4 ALA 5 GLY 6 PRO 7 ASP 8 LEU 9 LEU 10 GLN 11 ALA 12 LEU 13 ASN 14 PRO 15 THR 16 GLN 17 ALA 18 GLN 19 ALA 20 ALA 21 ASP 22 HIS 23 PHE 24 THR 25 GLY 26 PRO 27 ALA 28 LEU 29 VAL 30 ILE 31 ALA 32 GLY 33 ALA 34 GLY 35 SER 36 GLY 37 LYS 38 THR 39 ARG 40 THR 41 LEU 42 ILE 43 TYR 44 ARG 45 ILE 46 ALA 47 HIS 48 LEU 49 ILE 50 GLY 51 HIS 52 TYR 53 GLY 54 VAL 55 HIS 56 PRO 57 GLY 58 GLU 59 ILE 60 LEU 61 ALA 62 VAL 63 THR 64 PHE 65 THR 66 ASN 67 LYS 68 ALA 69 ALA 70 ALA 71 GLU 72 MET 73 ARG 74 GLU 75 ARG 76 ALA 77 GLY 78 HIS 79 LEU 80 VAL 81 PRO 82 GLY 83 ALA 84 GLY 85 ASP 86 LEU 87 TRP 88 MET 89 SER 90 THR 91 PHE 92 HIS 93 SER 94 ALA 95 GLY 96 VAL 97 ARG 98 ILE 99 LEU 100 ARG 101 THR 102 TYR 103 GLY 104 GLU 105 HIS 106 ILE 107 GLY 108 LEU 109 ARG 110 ARG 111 GLY 112 PHE 113 VAL 114 ILE 115 TYR 116 ASP 117 ASP 118 ASP 119 ASP 120 GLN 121 LEU 122 ASP 123 ILE 124 ILE 125 LYS 126 GLU 127 VAL 128 MET 129 GLY 130 SER 131 ILE 132 PRO 133 GLY 134 GLU 138 THR 139 GLN 140 PRO 141 ARG 142 VAL 143 ILE 144 ARG 145 GLY 146 ILE 147 ILE 148 ASP 149 ARG 150 ALA 151 LYS 152 SER 153 ASN 154 LEU 155 TRP 156 THR 157 PRO 158 ASP 159 ASP 160 LEU 161 ASP 162 ARG 163 SER 164 ARG 165 GLU 166 PRO 167 PHE 168 ILE 169 SER 170 GLY 171 LEU 172 PRO 173 ARG 174 ASP 175 ALA 176 ALA 177 ALA 178 GLU 179 ALA 180 TYR 181 ARG 182 ARG 183 TYR 184 GLU 185 VAL 186 ARG 187 LYS 188 LYS 189 GLY 190 GLN 191 ASN 192 ALA 193 ILE 194 ASP 195 PHE 196 GLY 197 ASP 198 LEU 199 ILE 200 THR 201 GLU 202 THR 203 VAL 204 ARG 205 LEU 206 PHE 207 LYS 208 GLU 209 VAL 210 PRO 211 GLY 212 VAL 213 LEU 214 ASP 215 LYS 216 VAL 217 GLN 218 ASN 219 LYS 220 ALA 221 LYS 222 PHE 223 ILE 224 HIS 225 VAL 226 ASP 227 GLU 228 TYR 229 GLN 230 ASP 231 THR 232 ASN 233 ARG 234 ALA 235 GLN 236 TYR 237 GLU 238 LEU 239 THR 240 ARG 241 LEU 242 LEU 243 ALA 244 SER 245 ARG 246 ASP 247 ARG 248 ASN 249 LEU 250 LEU 251 VAL 252 VAL 253 GLY 254 ASP 255 PRO 256 ASP 257 GLN 258 SER 259 ILE 260 TYR 261 LYS 262 PHE 263 ARG 264 GLY 265 ALA 266 ASP 267 ILE 268 GLN 269 ASN 270 ILE 271 LEU 272 ASP 273 PHE 274 GLN 275 LYS 276 ASP 277 TYR 278 PRO 279 ASP 280 ALA 281 LYS 282 VAL 283 TYR 284 MET 285 LEU 286 GLU 287 HIS 288 ASN 289 TYR 290 ARG 291 SER 292 SER 293 ALA 294 ARG 295 VAL 296 LEU 297 GLU 298 ALA 299 ALA 300 ASN 301 LYS 302 LEU 303 ILE 304 GLU 305 ASN 306 ASN 307 THR 308 GLU 309 ARG 310 LEU 311 ASP 312 LYS 313 THR 314 LEU 315 LYS 316 PRO 317 VAL 318 LYS 319 GLU 320 ALA 321 GLY 322 GLN 323 PRO 324 VAL 325 THR 326 PHE 327 HIS 328 ARG 329 ALA 330 THR 331 ASP 332 HIS 333 ARG 334 ALA 335 GLU 336 GLY 337 ASP 338 TYR 339 VAL 340 ALA 341 ASP 342 TRP 343 LEU 344 THR 345 ARG 346 LEU 347 HIS 348 GLY 349 GLU 350 GLY 351 ARG 352 ALA 353 TRP 354 SER 355 GLU 356 MET 357 ALA 358 ILE 359 LEU 360 TYR 361 ARG 362 THR 363 ASN 364 ALA 365 GLN 366 SER 367 ARG 368 VAL 369 ILE 370 GLU 371 GLU 372 SER 373 LEU 374 ARG 375 ARG 376 VAL 377 GLN 378 ILE 379 PRO 380 ALA 381 ARG 382 ILE 383 VAL 384 GLY 385 GLY 386 VAL 387 GLY 388 PHE 389 TYR 390 ASP 391 ARG 392 ARG 393 GLU 394 ILE 395 ARG 396 ASP 397 ILE 398 LEU 399 ALA 400 TYR 401 ALA 402 ARG 403 LEU 404 ALA 405 LEU 406 ASN 407 PRO 408 ALA 409 ASP 410 ASP 411 VAL 412 ALA 413 LEU 414 ARG 415 ARG 416 ILE 417 ILE 418 GLY 419 ARG 420 PRO 421 ARG 422 ARG 423 GLY 424 ILE 425 GLY 426 ASP 427 THR 428 ALA 429 LEU 430 GLN 431 LYS 432 LEU 433 MET 434 GLU 435 TRP 436 ALA 437 ARG 438 THR 439 HIS 440 HIS 441 THR 442 SER 443 VAL 444 LEU 445 THR 446 ALA 447 CYS 448 ALA 449 ASN 450 ALA 451 ALA 452 GLU 453 GLN 454 ASN 455 ILE 456 LEU 457 ASP 458 ARG 459 GLY 460 ALA 461 HIS 462 LYS 463 ALA 464 THR 465 GLU 466 PHE 467 ALA 468 GLY 469 LEU 470 MET 471 GLU 472 ALA 473 MET 474 SER 475 GLU 476 ALA 477 ALA 478 ASP 479 ASN 480 TYR 481 GLU 482 PRO 483 ALA 484 ALA 485 PHE 486 LEU 487 ARG 488 PHE 489 VAL 490 MET 491 GLU 492 THR 493 SER 494 GLY 495 TYR 496 LEU 497 ASP 498 LEU 499 LEU 500 ARG 501 GLN 502 GLU 503 GLY 504 GLN 505 GLU 506 GLY 507 GLN 508 VAL 509 ARG 510 LEU 511 GLU 512 ASN 513 LEU 514 GLU 515 GLU 516 LEU 517 VAL 518 SER 519 ALA 520 ALA 521 GLU 522 GLU 523 TRP 524 SER 525 GLN 526 ASP 527 GLU 528 ALA 529 ASN 530 VAL 531 GLY 532 GLY 533 SER 534 ILE 535 ALA 536 ASP 537 PHE 538 LEU 539 ASP 540 ASP 541 ALA 542 ALA 543 LEU 544 LEU 545 SER 546 SER 547 VAL 548 ASP 549 ASP 550 MET 551 ARG 552 THR 553 LYS 554 ALA 555 GLU 556 ASN 557 LYS 558 GLY 559 ALA 560 PRO 561 GLU 562 ASP 563 ALA 564 VAL 565 THR 566 LEU 567 MET 568 THR 569 LEU 570 HIS 571 ASN 572 ALA 573 LYS 574 GLY 575 LEU 576 GLU 577 PHE 578 PRO 579 VAL 580 VAL 581 PHE 582 ILE 583 VAL 584 GLY 585 VAL 586 GLU 587 GLN 588 GLY 589 LEU 590 LEU 591 PRO 592 SER 593 LYS 594 GLY 595 ALA 596 ILE 597 ALA 598 GLU 599 GLY 600 PRO 601 SER 602 GLY 603 ILE 604 GLU 605 GLU 606 GLU 607 ARG 608 ARG 609 LEU 610 PHE 611 TYR 612 VAL 613 GLY 614 ILE 615 THR 616 ARG 617 ALA 618 MET 619 GLU 620 ARG 621 LEU 622 LEU 623 MET 624 THR 625 ALA 626 ALA 627 GLN 628 ASN 629 ARG 630 MET 631 GLN 632 PHE 633 GLY 634 LYS 635 THR 636 ASN 637 ALA 638 ALA 639 GLU 640 ASP 641 SER 642 ALA 643 PHE 644 LEU 645 GLU 646 ASP 647 ILE 648 GLU 649 GLY 650 LEU 651 PHE 652 ASP 653 THR 654 VAL 655 ASP 656 PRO 657 TYR 658 GLY 659 GLN 660 PRO 661 ILE 662 GLU 663 TYR 664

Other macromolecules

Unit 3	DA 1 DC 2 DG 3 DA 4 DC 5 DC 6 DT 7 DG 8 DC 9 DG 10 DA 11 DG 12 DC 13 DA 14 DC 15 DT 16 DG 17 DC 18 DT 19 DT 20 DT 21 DT 22 DT 23 DT 24
Unit 4	DC 2 DA 3 DG 4 DT 5 DG 6 DC 7 DT 8 DC 9 DG 10 DC 11 DA 12 DG 13 DG 14 DT 15 DC 16 DG 17 DT 18 DT 19 DT 20 DT 21 DT 22 DT 23 DT 24

Ligands

Unit 5	ANP 1665 MG 1666 NO3 1667 GOL 1668 NO3 1669 NA 1670
Unit 6	ANP 1665 MG 1666 NO3 1667 GOL 1668 NO3 1669 NA 1670