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Sequence, Chains, Asymmetric and Biological Units

Title YEAST NOT1-NOT2-NOT5 COMPLEX
Keywords TRANSCRIPTION, CTERMINAL COMPONENTS OF THE CCR4_NOT COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4BY6     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 508 4141 0
2  Protein    B 166 1356 0
3  Protein    C 176 1496 0
4  Protein    D 504 4116 0
5  Protein    E 168 1382 0
6  Protein    F 176 1496 0
7  Ligand    A 2 0 5
8  Ligand    B 1 0 6
9  Ligand    C 1 0 7
10  Ligand    D 2 0 5
11  Ligand    E 1 0 6
12  Ligand    F 1 0 7
13 Water     5 0 5
total       1711 13987 41
Proteins
Unit 1 THR1567 ARG1568 THR1569 GLU1570 LYS1571 PHE1572 TYR1573 LEU1574 VAL1575 PHE1576 THR1577 GLU1578 TRP1579 VAL1580 LYS1581 LEU1582 LEU1583 GLN1584 ARG1585 VAL1586 GLU1587 ASN1588 ASN1589 ASP1590 VAL1591 ILE1592 THR1593 THR1594 VAL1595 PHE1596 ILE1597 LYS1598 GLN1599 LEU1600 VAL1601 GLU1602 LYS1603 GLY1604 VAL1605 ILE1606 SER1607 ASP1608 THR1609 ASP1610 ASN1611 LEU1612 LEU1613 THR1614 PHE1615 VAL1616 LYS1617 SER1618 SER1619 LEU1620 GLU1621 LEU1622 SER1623 VAL1624 SER1625 SER1626 PHE1627 LYS1628 GLU1629 SER1630 ASP1631 PRO1632 THR1633 ASP1634 GLU1635 VAL1636 PHE1637 ILE1638 ALA1639 ILE1640 ASP1641 ALA1642 LEU1643 GLY1644 SER1645 LEU1646 ILE1647 ILE1648 LYS1649 LEU1650 LEU1651 ILE1652 LEU1653 GLN1654 ASP1655 PHE1656 LYS1657 THR1660 ARG1661 ARG1662 ASP1663 TYR1664 ILE1665 ASN1666 ALA1667 ILE1668 PHE1669 SER1670 VAL1671 ILE1672 VAL1673 LEU1674 VAL1675 PHE1676 ALA1677 LYS1678 ASP1679 HIS1680 SER1681 GLN1682 GLU1683 GLY1684 THR1685 THR1686 PHE1687 ASN1688 GLU1689 ARG1690 PRO1691 TYR1692 PHE1693 ARG1694 LEU1695 PHE1696 SER1697 ASN1698 ILE1699 LEU1700 TYR1701 GLU1702 TRP1703 ALA1704 THR1705 ILE1706 ARG1707 THR1708 HIS1709 ASN1710 PHE1711 VAL1712 ARG1713 ILE1714 SER1715 ASP1716 SER1717 SER1718 THR1719 ARG1720 GLN1721 GLU1722 LEU1723 ILE1724 GLU1725 PHE1726 ASP1727 SER1728 VAL1729 PHE1730 TYR1731 ASN1732 THR1733 PHE1734 SER1735 GLY1736 TYR1737 LEU1738 HIS1739 ALA1740 LEU1741 GLN1742 PRO1743 PHE1744 ALA1745 PHE1746 PRO1747 GLY1748 PHE1749 SER1750 PHE1751 ALA1752 TRP1753 VAL1754 THR1755 LEU1756 LEU1757 SER1758 HIS1759 ARG1760 MET1761 LEU1762 LEU1763 PRO1764 ILE1765 MET1766 LEU1767 ARG1768 LEU1769 PRO1770 ASN1771 LYS1772 ILE1773 GLY1774 TRP1775 GLU1776 LYS1777 LEU1778 MET1779 LEU1780 LEU1781 ILE1782 ILE1783 ASP1784 LEU1785 PHE1786 LYS1787 PHE1788 LEU1789 ASP1790 GLN1791 TYR1792 THR1793 SER1794 LYS1795 HIS1796 ALA1797 VAL1798 ASP1800 ALA1801 VAL1802 SER1803 VAL1804 VAL1805 TYR1806 LYS1807 GLY1808 THR1809 LEU1810 ARG1811 ILE1812 ILE1813 LEU1814 GLY1815 ILE1816 SER1817 ASN1818 ASP1819 MET1820 PRO1821 SER1822 PHE1823 LEU1824 ILE1825 GLU1826 ASN1827 HIS1828 TYR1829 GLU1830 LEU1831 MET1832 ASN1833 ASN1834 LEU1835 PRO1836 PRO1837 THR1838 TYR1839 PHE1840 GLN1841 LEU1842 LYS1843 ASN1844 VAL1845 ILE1846 LEU1847 SER1848 ALA1849 ILE1850 PRO1851 LYS1852 ASN1853 MET1854 THR1855 VAL1856 PRO1857 ASN1858 PRO1859 TYR1860 ASP1861 VAL1862 ASP1863 LEU1864 ASN1865 MET1866 GLU1867 ASP1868 ILE1869 PRO1870 ALA1871 CYS1872 LYS1873 GLU1874 LEU1875 PRO1876 GLU1877 VAL1878 PHE1879 PHE1880 ASP1881 PRO1882 VAL1883 ILE1884 ASP1885 LEU1886 HIS1887 SER1888 LEU1889 LYS1890 LYS1891 PRO1892 VAL1893 ASP1894 ASN1895 TYR1896 LEU1897 ARG1898 ILE1899 PRO1900 SER1901 ASN1902 SER1903 LEU1904 LEU1905 ARG1906 THR1907 ILE1908 LEU1909 SER1910 ALA1911 ILE1912 TYR1913 LYS1914 ASP1915 THR1916 TYR1917 ASP1918 ILE1919 LYS1920 LYS1921 GLY1922 VAL1923 GLY1924 TYR1925 ASP1926 PHE1927 LEU1928 SER1929 VAL1930 ASP1931 SER1932 LYS1933 LEU1934 ILE1935 ARG1936 ALA1937 ILE1938 VAL1939 LEU1940 HIS1941 VAL1942 GLY1943 ILE1944 GLU1945 ALA1946 GLY1947 ILE1948 GLU1949 TYR1950 LYS1951 ARG1952 THR1953 ASN1956 ALA1957 VAL1958 PHE1959 ASN1960 THR1961 LYS1962 SER1963 SER1964 TYR1965 TYR1966 THR1967 LEU1968 LEU1969 PHE1970 ASN1971 LEU1972 ILE1973 GLN1974 ASN1975 GLY1976 SER1977 ILE1978 GLU1979 MET1980 LYS1981 TYR1982 GLN1983 ILE1984 ILE1985 LEU1986 SER1987 ILE1988 VAL1989 GLU1990 GLN1991 LEU1992 ARG1993 TYR1994 PRO1995 ASN1996 ILE1997 HIS1998 THR1999 TYR2000 TRP2001 PHE2002 SER2003 PHE2004 VAL2005 LEU2006 MET2007 ASN2008 MET2009 PHE2010 LYS2011 SER2012 ASP2013 GLU2014 TRP2015 ASN2016 ASP2017 GLN2018 LYS2019 LEU2020 GLU2021 VAL2022 GLN2023 GLU2024 ILE2025 ILE2026 LEU2027 ARG2028 ASN2029 PHE2030 LEU2031 LYS2032 ARG2033 ILE2034 ILE2035 VAL2036 ASN2037 LYS2038 PRO2039 HIS2040 THR2041 TRP2042 GLY2043 VAL2044 SER2045 VAL2046 PHE2047 PHE2048 THR2049 GLN2050 LEU2051 ILE2052 ASN2053 ASN2054 ASN2055 ASP2056 ILE2057 ASN2058 LEU2059 LEU2060 ASP2061 LEU2062 PRO2063 PHE2064 VAL2065 GLN2066 SER2067 VAL2068 PRO2069 GLU2070 ILE2071 LYS2072 LEU2073 ILE2074 LEU2075 GLN2076 GLN2077 LEU2078 VAL2079
Unit 2 GLY5 LEU6 LYS7 ALA8 LEU9 VAL10 PRO11 LEU12 LEU13 LEU30 GLY31 ALA32 ASP33 LEU34 SER35 SER36 MET37 LEU38 TYR39 SER40 LEU41 GLY42 ILE43 ASP49 HIS50 ARG51 VAL52 LEU53 ASP54 THR55 PHE56 GLN57 SER58 PRO59 TRP60 ALA61 GLU62 THR63 SER64 ARG65 SER66 GLU67 VAL68 GLU69 PRO70 ARG71 PHE72 PHE73 THR74 PRO75 GLU76 SER77 PHE78 THR79 ASN80 ILE81 PRO82 GLY83 VAL84 LEU85 GLN86 SER87 THR88 VAL89 THR90 PRO91 PRO92 CYS93 PHE94 ASN95 SER96 ILE97 GLN98 ASN99 ASP100 GLN101 GLN102 ARG103 VAL104 ALA105 LEU106 PHE107 GLN108 ASP109 GLU110 THR111 LEU112 PHE113 PHE114 LEU115 PHE116 TYR117 LYS118 HIS119 PRO120 GLY121 THR122 VAL123 ILE124 GLN125 GLU126 LEU127 THR128 TYR129 LEU130 GLU131 LEU132 ARG133 LYS134 ARG135 ASN136 TRP137 ARG138 TYR139 HIS140 LYS141 THR142 LEU143 LYS144 ALA145 TRP146 LEU147 THR148 LYS149 ASP150 PRO151 MET152 MET153 GLU154 PRO155 ILE156 VAL157 SER158 ALA159 ASP160 GLY161 LEU162 SER163 GLU164 ARG165 GLY166 SER167 TYR168 VAL169 PHE170 PHE171 ASP172 PRO173 GLN174 ARG175 TRP176 GLU177 LYS178 CYS179 GLN180 ARG181 ASP182 PHE183 LEU184 LEU185 PHE186 TYR187 ASN188 ALA189 ILE190 MET191
Unit 3 THR346 ASN347 ALA348 ALA349 PHE350 GLN351 ASN352 PRO353 LEU354 PHE355 ASN356 ASP357 GLU358 LEU359 LYS360 TYR361 TRP362 LEU363 ASP364 SER365 LYS366 ARG367 TYR368 LEU369 MET370 GLN371 PRO372 LEU373 GLN374 GLU375 MET376 SER377 PRO378 LYS379 MET380 VAL381 SER382 GLN383 LEU384 GLU385 SER386 SER387 LEU388 LEU389 ASN390 CYS391 PRO392 ASP393 SER394 LEU395 ASP396 ALA397 ASP398 SER399 PRO400 CYS401 LEU402 TYR403 THR404 LYS405 PRO406 LEU407 SER408 LEU409 PRO410 HIS411 PRO412 THR413 SER414 ILE415 PHE416 PHE417 PRO418 ASN419 GLU420 PRO421 ILE422 ARG423 PHE424 VAL425 TYR426 PRO427 LYS454 LYS455 ASP456 ASP457 ASP458 ILE459 TYR460 SER461 ARG462 THR463 SER464 LEU465 ALA466 ARG467 ILE468 PHE469 MET470 LYS471 PHE472 ASP473 LEU474 ASP475 THR476 LEU477 PHE478 PHE479 ILE480 PHE481 TYR482 HIS483 TYR484 GLN485 GLY486 SER487 TYR488 GLU489 GLN490 PHE491 LEU492 ALA493 ALA494 ARG495 GLU496 LEU497 PHE498 LYS499 ASN500 ARG501 ASN502 TRP503 LEU504 PHE505 ASN506 LYS507 VAL508 ASP509 ARG510 CYS511 TRP512 TYR513 TYR514 LYS515 GLU516 GLU530 SER531 TRP532 ARG533 TYR534 PHE535 ASP536 TYR537 LYS538 LYS539 SER540 TRP541 LEU542 ALA543 ARG544 ARG545 CYS546 GLY547 ASN548 ASP549 PHE550 VAL551 TYR552 ASN553 GLU554 GLU555 ASP556 PHE557 GLU558 LYS559 LEU560
Unit 4 THR1567 ARG1568 THR1569 GLU1570 LYS1571 PHE1572 TYR1573 LEU1574 VAL1575 PHE1576 THR1577 GLU1578 TRP1579 VAL1580 LYS1581 LEU1582 LEU1583 GLN1584 ARG1585 VAL1586 GLU1587 ASN1588 ASN1589 ASP1590 VAL1591 ILE1592 THR1593 THR1594 VAL1595 PHE1596 ILE1597 LYS1598 GLN1599 LEU1600 VAL1601 GLU1602 LYS1603 GLY1604 VAL1605 ILE1606 SER1607 ASP1608 THR1609 ASP1610 ASN1611 LEU1612 LEU1613 THR1614 PHE1615 VAL1616 LYS1617 SER1618 SER1619 LEU1620 GLU1621 LEU1622 SER1623 VAL1624 SER1625 SER1626 PHE1627 LYS1628 GLU1629 SER1630 ASP1631 PRO1632 THR1633 ASP1634 GLU1635 VAL1636 PHE1637 ILE1638 ALA1639 ILE1640 ASP1641 ALA1642 LEU1643 GLY1644 SER1645 LEU1646 ILE1647 ILE1648 LYS1649 LEU1650 LEU1651 ILE1652 LEU1653 GLN1654 ASP1655 PHE1656 LYS1657 THR1660 ARG1661 ARG1662 ASP1663 TYR1664 ILE1665 ASN1666 ALA1667 ILE1668 PHE1669 SER1670 VAL1671 ILE1672 VAL1673 LEU1674 VAL1675 PHE1676 ALA1677 LYS1678 ASP1679 HIS1680 SER1681 GLN1682 GLU1683 GLY1684 THR1685 THR1686 PHE1687 ASN1688 GLU1689 ARG1690 PRO1691 TYR1692 PHE1693 ARG1694 LEU1695 PHE1696 SER1697 ASN1698 ILE1699 LEU1700 TYR1701 GLU1702 TRP1703 ALA1704 THR1705 ILE1706 ARG1707 THR1708 HIS1709 ASN1710 PHE1711 VAL1712 ARG1713 ILE1714 SER1715 ASP1716 SER1717 SER1718 THR1719 ARG1720 GLN1721 GLU1722 LEU1723 ILE1724 GLU1725 PHE1726 ASP1727 SER1728 VAL1729 PHE1730 TYR1731 ASN1732 THR1733 PHE1734 SER1735 GLY1736 TYR1737 LEU1738 HIS1739 ALA1740 LEU1741 GLN1742 PRO1743 PHE1744 ALA1745 PHE1746 PRO1747 GLY1748 PHE1749 SER1750 PHE1751 ALA1752 TRP1753 VAL1754 THR1755 LEU1756 LEU1757 SER1758 HIS1759 ARG1760 MET1761 LEU1762 LEU1763 PRO1764 ILE1765 MET1766 LEU1767 ARG1768 LEU1769 PRO1770 ASN1771 LYS1772 ILE1773 GLY1774 TRP1775 GLU1776 LYS1777 LEU1778 MET1779 LEU1780 LEU1781 ILE1782 ILE1783 ASP1784 LEU1785 PHE1786 LYS1787 PHE1788 LEU1789 ASP1790 GLN1791 TYR1792 THR1793 SER1794 LYS1795 HIS1796 ALA1797 VAL1798 ASP1800 ALA1801 VAL1802 SER1803 VAL1804 VAL1805 TYR1806 LYS1807 GLY1808 THR1809 LEU1810 ARG1811 ILE1812 ILE1813 LEU1814 GLY1815 ILE1816 SER1817 ASN1818 ASP1819 MET1820 PRO1821 SER1822 PHE1823 LEU1824 ILE1825 GLU1826 ASN1827 HIS1828 TYR1829 GLU1830 LEU1831 MET1832 ASN1833 ASN1834 LEU1835 PRO1836 PRO1837 THR1838 TYR1839 PHE1840 GLN1841 LEU1842 LYS1843 ASN1844 VAL1845 ILE1846 LEU1847 SER1848 ALA1849 ILE1850 PRO1851 LYS1852 ASN1853 MET1854 THR1855 VAL1856 PRO1857 ASN1858 PRO1859 TYR1860 ASP1861 VAL1862 ASP1863 LEU1864 ASN1865 MET1866 GLU1867 ASP1868 ILE1869 PRO1870 ALA1871 CYS1872 LYS1873 GLU1874 LEU1875 PRO1876 GLU1877 VAL1878 PHE1879 PHE1880 ASP1881 PRO1882 VAL1883 ILE1884 ASP1885 LEU1886 HIS1887 SER1888 LEU1889 LYS1890 LYS1891 PRO1892 VAL1893 ASP1894 ASN1895 TYR1896 LEU1897 ARG1898 ILE1899 PRO1900 SER1901 ASN1902 SER1903 LEU1904 LEU1905 ARG1906 THR1907 ILE1908 LEU1909 SER1910 ALA1911 ILE1912 TYR1913 LYS1914 ASP1915 THR1916 TYR1917 ASP1918 ILE1919 LYS1920 LYS1921 GLY1922 VAL1923 GLY1924 TYR1925 ASP1926 PHE1927 LEU1928 SER1929 VAL1930 ASP1931 SER1932 LYS1933 LEU1934 ILE1935 ARG1936 ALA1937 ILE1938 VAL1939 LEU1940 HIS1941 VAL1942 GLY1943 ILE1944 GLU1945 ALA1946 GLY1947 ILE1948 GLU1949 TYR1950 LYS1951 ARG1952 THR1953 ASN1956 ALA1957 VAL1958 PHE1959 ASN1960 THR1961 LYS1962 SER1963 SER1964 TYR1965 TYR1966 THR1967 LEU1968 LEU1969 PHE1970 ASN1971 LEU1972 ILE1973 GLN1974 ASN1975 GLY1976 SER1977 ILE1978 GLU1979 MET1980 LYS1981 TYR1982 GLN1983 ILE1984 ILE1985 LEU1986 SER1987 ILE1988 VAL1989 GLU1990 GLN1991 LEU1992 ARG1993 TYR1994 PRO1995 ASN1996 ILE1997 HIS1998 THR1999 TYR2000 TRP2001 PHE2002 SER2003 PHE2004 VAL2005 LEU2006 MET2007 ASN2008 MET2009 PHE2010 LYS2011 SER2012 ASP2013 GLU2014 TRP2015 ASN2016 ASP2017 GLN2018 LYS2019 LEU2020 GLU2021 VAL2022 GLN2023 GLU2024 ILE2025 ILE2026 LEU2027 ARG2028 ASN2029 PHE2030 LEU2031 LYS2032 ARG2033 ILE2034 ILE2035 VAL2036 ASN2037 LYS2038 PRO2039 HIS2040 THR2041 TRP2042 GLY2043 VAL2044 SER2045 VAL2046 PHE2047 PHE2048 THR2049 GLN2050 LEU2051 ILE2052 ASN2053 ASN2054 ASN2055 LEU2059 LEU2060 ASP2061 LEU2062 PRO2063 PHE2064 VAL2065 GLN2066 SER2067 VAL2068 PRO2069 GLU2070 ILE2071 LYS2072 LEU2073 ILE2074 LEU2075 GLN2076 GLN2077 LEU2078
Unit 5 PHE4 GLY5 LEU6 LYS7 ALA8 LEU9 VAL10 PRO11 LEU12 LEU13 LEU30 GLY31 ALA32 ASP33 LEU34 SER35 SER36 MET37 LEU38 TYR39 SER40 LEU41 GLY42 ILE43 GLN48 ASP49 HIS50 ARG51 VAL52 LEU53 ASP54 THR55 PHE56 GLN57 SER58 PRO59 TRP60 ALA61 GLU62 THR63 SER64 ARG65 SER66 GLU67 VAL68 GLU69 PRO70 ARG71 PHE72 PHE73 THR74 PRO75 GLU76 SER77 PHE78 THR79 ASN80 ILE81 PRO82 GLY83 VAL84 LEU85 GLN86 SER87 THR88 VAL89 THR90 PRO91 PRO92 CYS93 PHE94 ASN95 SER96 ILE97 GLN98 ASN99 ASP100 GLN101 GLN102 ARG103 VAL104 ALA105 LEU106 PHE107 GLN108 ASP109 GLU110 THR111 LEU112 PHE113 PHE114 LEU115 PHE116 TYR117 LYS118 HIS119 PRO120 GLY121 THR122 VAL123 ILE124 GLN125 GLU126 LEU127 THR128 TYR129 LEU130 GLU131 LEU132 ARG133 LYS134 ARG135 ASN136 TRP137 ARG138 TYR139 HIS140 LYS141 THR142 LEU143 LYS144 ALA145 TRP146 LEU147 THR148 LYS149 ASP150 PRO151 MET152 MET153 GLU154 PRO155 ILE156 VAL157 SER158 ALA159 ASP160 GLY161 LEU162 SER163 GLU164 ARG165 GLY166 SER167 TYR168 VAL169 PHE170 PHE171 ASP172 PRO173 GLN174 ARG175 TRP176 GLU177 LYS178 CYS179 GLN180 ARG181 ASP182 PHE183 LEU184 LEU185 PHE186 TYR187 ASN188 ALA189 ILE190 MET191
Unit 6 THR346 ASN347 ALA348 ALA349 PHE350 GLN351 ASN352 PRO353 LEU354 PHE355 ASN356 ASP357 GLU358 LEU359 LYS360 TYR361 TRP362 LEU363 ASP364 SER365 LYS366 ARG367 TYR368 LEU369 MET370 GLN371 PRO372 LEU373 GLN374 GLU375 MET376 SER377 PRO378 LYS379 MET380 VAL381 SER382 GLN383 LEU384 GLU385 SER386 SER387 LEU388 LEU389 ASN390 CYS391 PRO392 ASP393 SER394 LEU395 ASP396 ALA397 ASP398 SER399 PRO400 CYS401 LEU402 TYR403 THR404 LYS405 PRO406 LEU407 SER408 LEU409 PRO410 HIS411 PRO412 THR413 SER414 ILE415 PHE416 PHE417 PRO418 ASN419 GLU420 PRO421 ILE422 ARG423 PHE424 VAL425 TYR426 PRO427 LYS454 LYS455 ASP456 ASP457 ASP458 ILE459 TYR460 SER461 ARG462 THR463 SER464 LEU465 ALA466 ARG467 ILE468 PHE469 MET470 LYS471 PHE472 ASP473 LEU474 ASP475 THR476 LEU477 PHE478 PHE479 ILE480 PHE481 TYR482 HIS483 TYR484 GLN485 GLY486 SER487 TYR488 GLU489 GLN490 PHE491 LEU492 ALA493 ALA494 ARG495 GLU496 LEU497 PHE498 LYS499 ASN500 ARG501 ASN502 TRP503 LEU504 PHE505 ASN506 LYS507 VAL508 ASP509 ARG510 CYS511 TRP512 TYR513 TYR514 LYS515 GLU516 GLU530 SER531 TRP532 ARG533 TYR534 PHE535 ASP536 TYR537 LYS538 LYS539 SER540 TRP541 LEU542 ALA543 ARG544 ARG545 CYS546 GLY547 ASN548 ASP549 PHE550 VAL551 TYR552 ASN553 GLU554 GLU555 ASP556 PHE557 GLU558 LYS559 LEU560
Ligands
Unit 7 CA3080 ACT3081
Unit 8 GOL1192
Unit 9 PEG1561
Unit 10 CA3079 ACT3080
Unit 11 GOL1192
Unit 12 PEG1561
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany