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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ESCHERICHIA COLI 23S RRNA (A2030-N6)- METHYLTRANSFERASE RLMJ IN COMPLEX WITH S-ADENOSYLMETHIONINE
Keywords TRANSFERASE, N6-METHYLADENINE, ROSSMANN-LIKE FOLD, SUBDOMAIN INSERTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4BLV     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J  A 280 2256 0
2  Protein   RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J  B 276 2224 0
3  Ligand   RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J  A 18 0 102
4  Ligand   RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J  B 16 0 90
5 Water     439 0 439
total       1029 4480 631

Proteins
Unit 1 MET1 LEU2 SER3 TYR4 ARG5 HIS6 SER7 PHE8 HIS9 ALA10 GLY11 ASN12 HIS13 ALA14 ASP15 VAL16 LEU17 LYS18 HIS19 THR20 VAL21 GLN22 SER23 LEU24 ILE25 ILE26 GLU27 SER28 LEU29 LYS30 GLU31 LYS32 ASP33 LYS34 PRO35 PHE36 LEU37 TYR38 LEU39 ASP40 THR41 HIS42 ALA43 GLY44 ALA45 GLY46 ARG47 TYR48 GLN49 LEU50 GLY51 SER52 GLU53 HIS54 ALA55 GLU56 ARG57 THR58 GLY59 GLU60 TYR61 LEU62 GLU63 GLY64 ILE65 ALA66 ARG67 ILE68 TRP69 GLN70 GLN71 ASP72 ASP73 LEU74 PRO75 ALA76 GLU77 LEU78 GLU79 ALA80 TYR81 ILE82 ASN83 VAL84 VAL85 LYS86 HIS87 PHE88 ASN89 ARG90 SER91 GLY92 GLN93 LEU94 ARG95 TYR96 TYR97 PRO98 GLY99 SER100 PRO101 LEU102 ILE103 ALA104 ARG105 LEU106 LEU107 LEU108 ARG109 GLU110 GLN111 ASP112 SER113 LEU114 GLN115 LEU116 THR117 GLU118 LEU119 HIS120 PRO121 SER122 ASP123 TYR124 PRO125 LEU126 LEU127 ARG128 SER129 GLU130 PHE131 GLN132 LYS133 ASP134 SER135 ARG136 ALA137 ARG138 VAL139 GLU140 LYS141 ALA142 ASP143 GLY144 PHE145 GLN146 GLN147 LEU148 LYS149 ALA150 LYS151 LEU152 PRO153 PRO154 VAL155 SER156 ARG157 ARG158 GLY159 LEU160 ILE161 LEU162 ILE163 ASP164 PRO165 PRO166 TYR167 GLU168 MET169 LYS170 THR171 ASP172 TYR173 GLN174 ALA175 VAL176 VAL177 SER178 GLY179 ILE180 ALA181 GLU182 GLY183 TYR184 LYS185 ARG186 PHE187 ALA188 THR189 GLY190 ILE191 TYR192 ALA193 LEU194 TRP195 TYR196 PRO197 VAL198 VAL199 LEU200 ARG201 GLN202 GLN203 ILE204 LYS205 ARG206 MET207 ILE208 HIS209 ASP210 LEU211 GLU212 ALA213 THR214 GLY215 ILE216 ARG217 LYS218 ILE219 LEU220 GLN221 ILE222 GLU223 LEU224 ALA225 VAL226 LEU227 PRO228 ASP229 SER230 ASP231 ARG232 ARG233 GLY234 MET235 THR236 ALA237 SER238 GLY239 MET240 ILE241 VAL242 ILE243 ASN244 PRO245 PRO246 TRP247 LYS248 LEU249 GLU250 GLN251 GLN252 MET253 ASN254 ASN255 VAL256 LEU257 PRO258 TRP259 LEU260 HIS261 SER262 LYS263 LEU264 VAL265 PRO266 ALA267 GLY268 THR269 GLY270 HIS271 ALA272 THR273 VAL274 SER275 TRP276 ILE277 VAL278 PRO279 GLU280
Unit 2 LEU2 SER3 TYR4 ARG5 HIS6 SER7 PHE8 HIS9 ALA10 GLY11 ASN12 HIS13 ALA14 ASP15 VAL16 LEU17 LYS18 HIS19 THR20 VAL21 GLN22 SER23 LEU24 ILE25 ILE26 GLU27 SER28 LEU29 LYS30 GLU31 LYS32 ASP33 LYS34 PRO35 PHE36 LEU37 TYR38 LEU39 ASP40 THR41 HIS42 ALA43 GLY44 ALA45 GLY46 ARG47 TYR48 GLN49 LEU50 GLY51 SER52 GLU56 ARG57 THR58 GLY59 GLU60 TYR61 LEU62 GLU63 GLY64 ILE65 ALA66 ARG67 ILE68 TRP69 GLN70 GLN71 ASP72 ASP73 LEU74 PRO75 ALA76 GLU77 LEU78 GLU79 ALA80 TYR81 ILE82 ASN83 VAL84 VAL85 LYS86 HIS87 PHE88 ASN89 ARG90 SER91 GLY92 GLN93 LEU94 ARG95 TYR96 TYR97 PRO98 GLY99 SER100 PRO101 LEU102 ILE103 ALA104 ARG105 LEU106 LEU107 LEU108 ARG109 GLU110 GLN111 ASP112 SER113 LEU114 GLN115 LEU116 THR117 GLU118 LEU119 HIS120 PRO121 SER122 ASP123 TYR124 PRO125 LEU126 LEU127 ARG128 SER129 GLU130 PHE131 GLN132 LYS133 ASP134 SER135 ARG136 ALA137 ARG138 VAL139 GLU140 LYS141 ALA142 ASP143 GLY144 PHE145 GLN146 GLN147 LEU148 LYS149 ALA150 LYS151 LEU152 PRO153 PRO154 VAL155 SER156 ARG157 ARG158 GLY159 LEU160 ILE161 LEU162 ILE163 ASP164 PRO165 PRO166 TYR167 GLU168 MET169 LYS170 THR171 ASP172 TYR173 GLN174 ALA175 VAL176 VAL177 SER178 GLY179 ILE180 ALA181 GLU182 GLY183 TYR184 LYS185 ARG186 PHE187 ALA188 THR189 GLY190 ILE191 TYR192 ALA193 LEU194 TRP195 TYR196 PRO197 VAL198 VAL199 LEU200 ARG201 GLN202 GLN203 ILE204 LYS205 ARG206 MET207 ILE208 HIS209 ASP210 LEU211 GLU212 ALA213 THR214 GLY215 ILE216 ARG217 LYS218 ILE219 LEU220 GLN221 ILE222 GLU223 LEU224 ALA225 VAL226 LEU227 PRO228 ASP229 SER230 ASP231 ARG232 ARG233 GLY234 MET235 THR236 ALA237 SER238 GLY239 MET240 ILE241 VAL242 ILE243 ASN244 PRO245 PRO246 TRP247 LYS248 LEU249 GLU250 GLN251 GLN252 MET253 ASN254 ASN255 VAL256 LEU257 PRO258 TRP259 LEU260 HIS261 SER262 LYS263 LEU264 VAL265 PRO266 ALA267 GLY268 THR269 GLY270 HIS271 ALA272 THR273 VAL274 SER275 TRP276 ILE277 VAL278 PRO279 GLU280

Ligands
Unit 3 SAM1281 GOL1282 PEG1283 EDO1284 EDO1285 EDO1286 EDO1287 EDO1288 EDO1289 EDO1290 EDO1291 EDO1292 EDO1293 EDO1294 EDO1295 EDO1296 SO41297 SO41298
Unit 4 SAM1281 PEG1282 EDO1283 EDO1284 EDO1285 EDO1286 EDO1287 EDO1288 EDO1289 EDO1290 EDO1291 EDO1292 EDO1293 EDO1294 EDO1295 EDO1296

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany