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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TETRAMER OF LA CROSSE VIRUS NUCLEOPROTE COMPLEX WITH SSRNA
Keywords VIRAL PROTEIN-RNA COMPLEX, RNA-BINDING, GENOME PACKAGING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4BHH     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOPROTEIN  B 231 1844 0
2  Protein   NUCLEOPROTEIN  D 223 1794 0
3  Protein   NUCLEOPROTEIN  F 232 1850 0
4  RNA    R 44 877 0
5  Protein   NUCLEOPROTEIN  Z 223 1794 0
total       953 8159 0

Proteins
Unit 1 ASP3 LEU4 VAL5 PHE6 TYR7 ASP8 VAL9 ALA10 SER11 THR12 GLY13 ALA14 ASN15 GLY16 PHE17 ASP18 PRO19 ASP20 ALA21 GLY22 TYR23 MET24 ASP25 PHE26 CYS27 VAL28 LYS29 ASN30 ALA31 GLU32 SER33 LEU34 ASN35 LEU36 ALA37 ALA38 VAL39 ARG40 ILE41 PHE42 PHE43 LEU44 ASN45 ALA46 ALA47 LYS48 ALA49 LYS50 ALA51 ALA52 LEU53 SER54 ARG55 LYS56 PRO57 GLU58 ARG59 LYS60 ALA61 ASN62 PRO63 LYS64 PHE65 GLY66 GLU67 TRP68 GLN69 VAL70 GLU71 VAL72 ILE73 ASN74 ASN75 HIS76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 ILE85 GLY86 ASN87 ASN88 ASP89 LEU90 THR91 ILE92 HIS93 ARG94 LEU95 SER96 GLY97 TYR98 LEU99 ALA100 ARG101 TRP102 VAL103 LEU104 ASP105 GLN106 TYR107 ASN108 GLU109 ASN110 ASP111 ASP112 GLU113 SER114 GLN115 HIS116 GLU117 LEU118 ILE119 ARG120 THR121 THR122 ILE123 ILE124 ASN125 PRO126 ILE127 ALA128 GLU129 SER130 ASN131 GLY132 VAL133 GLY134 TRP135 ASP136 SER137 GLY138 PRO139 GLU140 ILE141 TYR142 LEU143 SER144 PHE145 PHE146 PRO147 GLY148 THR149 GLU150 MET151 PHE152 LEU153 GLU154 THR155 PHE156 LYS157 PHE158 TYR159 PRO160 LEU161 THR162 ILE163 GLY164 ILE165 HIS166 ARG167 VAL168 LYS169 GLN170 GLY171 MET172 MET173 ASP174 PRO175 GLN176 TYR177 LEU178 LYS179 LYS180 ALA181 LEU182 ARG183 GLN184 ARG185 TYR186 GLY187 THR188 LEU189 THR190 ALA191 ASP192 LYS193 TRP194 MET195 SER196 GLN197 LYS198 VAL199 ALA200 ALA201 ILE202 ALA203 LYS204 SER205 LEU206 LYS207 ASP208 VAL209 GLU210 GLN211 LEU212 LYS213 TRP214 GLY215 LYS216 GLY217 GLY218 LEU219 SER220 ASP221 THR222 ALA223 LYS224 THR225 PHE226 LEU227 GLN228 LYS229 PHE230 GLY231 ILE232 ARG233
Unit 2 LEU4 VAL5 PHE6 TYR7 ASP8 GLY16 PHE17 ASP18 PRO19 ASP20 ALA21 GLY22 TYR23 MET24 ASP25 PHE26 CYS27 VAL28 LYS29 ASN30 ALA31 GLU32 SER33 LEU34 ASN35 LEU36 ALA37 ALA38 VAL39 ARG40 ILE41 PHE42 PHE43 LEU44 ASN45 ALA46 ALA47 LYS48 ALA49 LYS50 ALA51 ALA52 LEU53 SER54 ARG55 LYS56 PRO57 GLU58 ARG59 LYS60 ALA61 ASN62 PRO63 LYS64 PHE65 GLY66 GLU67 TRP68 GLN69 VAL70 GLU71 VAL72 ILE73 ASN74 ASN75 HIS76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 ILE85 GLY86 ASN87 ASN88 ASP89 LEU90 THR91 ILE92 HIS93 ARG94 LEU95 SER96 GLY97 TYR98 LEU99 ALA100 ARG101 TRP102 VAL103 LEU104 ASP105 GLN106 TYR107 ASN108 GLU109 ASN110 ASP111 ASP112 GLU113 SER114 GLN115 HIS116 GLU117 LEU118 ILE119 ARG120 THR121 THR122 ILE123 ILE124 ASN125 PRO126 ILE127 ALA128 GLU129 SER130 ASN131 GLY132 VAL133 GLY134 TRP135 ASP136 SER137 GLY138 PRO139 GLU140 ILE141 TYR142 LEU143 SER144 PHE145 PHE146 PRO147 GLY148 THR149 GLU150 MET151 PHE152 LEU153 GLU154 THR155 PHE156 LYS157 PHE158 TYR159 PRO160 LEU161 THR162 ILE163 GLY164 ILE165 HIS166 ARG167 VAL168 LYS169 GLN170 GLY171 MET172 MET173 ASP174 PRO175 GLN176 TYR177 LEU178 LYS179 LYS180 ALA181 LEU182 ARG183 GLN184 ARG185 TYR186 GLY187 THR188 LEU189 THR190 ALA191 ASP192 LYS193 TRP194 MET195 SER196 GLN197 LYS198 VAL199 ALA200 ALA201 ILE202 ALA203 LYS204 SER205 LEU206 LYS207 ASP208 VAL209 GLU210 GLN211 LEU212 LYS213 TRP214 GLY215 LYS216 GLY217 GLY218 LEU219 SER220 ASP221 THR222 ALA223 LYS224 THR225 PHE226 LEU227 GLN228 LYS229 PHE230 GLY231 ILE232 ARG233
Unit 3 SER2 ASP3 LEU4 VAL5 PHE6 TYR7 ASP8 VAL9 ALA10 SER11 THR12 GLY13 ALA14 ASN15 GLY16 PHE17 ASP18 PRO19 ASP20 ALA21 GLY22 TYR23 MET24 ASP25 PHE26 CYS27 VAL28 LYS29 ASN30 ALA31 GLU32 SER33 LEU34 ASN35 LEU36 ALA37 ALA38 VAL39 ARG40 ILE41 PHE42 PHE43 LEU44 ASN45 ALA46 ALA47 LYS48 ALA49 LYS50 ALA51 ALA52 LEU53 SER54 ARG55 LYS56 PRO57 GLU58 ARG59 LYS60 ALA61 ASN62 PRO63 LYS64 PHE65 GLY66 GLU67 TRP68 GLN69 VAL70 GLU71 VAL72 ILE73 ASN74 ASN75 HIS76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 ILE85 GLY86 ASN87 ASN88 ASP89 LEU90 THR91 ILE92 HIS93 ARG94 LEU95 SER96 GLY97 TYR98 LEU99 ALA100 ARG101 TRP102 VAL103 LEU104 ASP105 GLN106 TYR107 ASN108 GLU109 ASN110 ASP111 ASP112 GLU113 SER114 GLN115 HIS116 GLU117 LEU118 ILE119 ARG120 THR121 THR122 ILE123 ILE124 ASN125 PRO126 ILE127 ALA128 GLU129 SER130 ASN131 GLY132 VAL133 GLY134 TRP135 ASP136 SER137 GLY138 PRO139 GLU140 ILE141 TYR142 LEU143 SER144 PHE145 PHE146 PRO147 GLY148 THR149 GLU150 MET151 PHE152 LEU153 GLU154 THR155 PHE156 LYS157 PHE158 TYR159 PRO160 LEU161 THR162 ILE163 GLY164 ILE165 HIS166 ARG167 VAL168 LYS169 GLN170 GLY171 MET172 MET173 ASP174 PRO175 GLN176 TYR177 LEU178 LYS179 LYS180 ALA181 LEU182 ARG183 GLN184 ARG185 TYR186 GLY187 THR188 LEU189 THR190 ALA191 ASP192 LYS193 TRP194 MET195 SER196 GLN197 LYS198 VAL199 ALA200 ALA201 ILE202 ALA203 LYS204 SER205 LEU206 LYS207 ASP208 VAL209 GLU210 GLN211 LEU212 LYS213 TRP214 GLY215 LYS216 GLY217 GLY218 LEU219 SER220 ASP221 THR222 ALA223 LYS224 THR225 PHE226 LEU227 GLN228 LYS229 PHE230 GLY231 ILE232 ARG233
Unit 5 LEU4 VAL5 PHE6 TYR7 ASP8 GLY16 PHE17 ASP18 PRO19 ASP20 ALA21 GLY22 TYR23 MET24 ASP25 PHE26 CYS27 VAL28 LYS29 ASN30 ALA31 GLU32 SER33 LEU34 ASN35 LEU36 ALA37 ALA38 VAL39 ARG40 ILE41 PHE42 PHE43 LEU44 ASN45 ALA46 ALA47 LYS48 ALA49 LYS50 ALA51 ALA52 LEU53 SER54 ARG55 LYS56 PRO57 GLU58 ARG59 LYS60 ALA61 ASN62 PRO63 LYS64 PHE65 GLY66 GLU67 TRP68 GLN69 VAL70 GLU71 VAL72 ILE73 ASN74 ASN75 HIS76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 ILE85 GLY86 ASN87 ASN88 ASP89 LEU90 THR91 ILE92 HIS93 ARG94 LEU95 SER96 GLY97 TYR98 LEU99 ALA100 ARG101 TRP102 VAL103 LEU104 ASP105 GLN106 TYR107 ASN108 GLU109 ASN110 ASP111 ASP112 GLU113 SER114 GLN115 HIS116 GLU117 LEU118 ILE119 ARG120 THR121 THR122 ILE123 ILE124 ASN125 PRO126 ILE127 ALA128 GLU129 SER130 ASN131 GLY132 VAL133 GLY134 TRP135 ASP136 SER137 GLY138 PRO139 GLU140 ILE141 TYR142 LEU143 SER144 PHE145 PHE146 PRO147 GLY148 THR149 GLU150 MET151 PHE152 LEU153 GLU154 THR155 PHE156 LYS157 PHE158 TYR159 PRO160 LEU161 THR162 ILE163 GLY164 ILE165 HIS166 ARG167 VAL168 LYS169 GLN170 GLY171 MET172 MET173 ASP174 PRO175 GLN176 TYR177 LEU178 LYS179 LYS180 ALA181 LEU182 ARG183 GLN184 ARG185 TYR186 GLY187 THR188 LEU189 THR190 ALA191 ASP192 LYS193 TRP194 MET195 SER196 GLN197 LYS198 VAL199 ALA200 ALA201 ILE202 ALA203 LYS204 SER205 LEU206 LYS207 ASP208 VAL209 GLU210 GLN211 LEU212 LYS213 TRP214 GLY215 LYS216 GLY217 GLY218 LEU219 SER220 ASP221 THR222 ALA223 LYS224 THR225 PHE226 LEU227 GLN228 LYS229 PHE230 GLY231 ILE232 ARG233

Nucleic acids
Unit 4 U1 U2 U3 U4 U5 U6 U7 U8 U9 U10 U11 U12 U13 U14 U15 U16 U17 U18 U19 U20 U21 U22 U23 U24 U25 U26 U27 U28 U29 U30 U31 U32 U33 U34 U35 U36 U37 U38 U39 U40 U41 U42 U43 U44

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany