4BC2 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN D-XYLULOKINASE IN COMPLEX WITH D- AND ADENOSINE DIPHOSPHATE
• Keywords: TRANSFERASE, GLUCURONATE XYLULOKINASE PATHWAY, FGGY CARBOHYD KINASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4BC2	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	XYLULOSE KINASE	A	528	7619	204
2	Protein	XYLULOSE KINASE	B	527	7661	204
3	Protein	XYLULOSE KINASE	C	527	7664	204
4	Ligand	XYLULOSE KINASE	A	2	0	51
5	Ligand	XYLULOSE KINASE	B	3	0	61
6	Ligand	XYLULOSE KINASE	C	2	0	56
7	Water			732	0	732
total				2321	22944	1512

Proteins

Unit 1	ALA 5 PRO 6 ARG 7 ARG 8 CYS 9 CYS 10 LEU 11 GLY 12 TRP 13 ASP 14 PHE 15 SER 16 THR 17 GLN 18 GLN 19 VAL 20 LYS 21 VAL 22 VAL 23 ALA 24 VAL 25 ASP 26 ALA 27 GLU 28 LEU 29 ASN 30 VAL 31 PHE 32 TYR 33 GLU 34 GLU 35 SER 36 VAL 37 HIS 38 PHE 39 ASP 40 ARG 41 ASP 42 LEU 43 PRO 44 GLU 45 PHE 46 GLY 47 THR 48 GLN 49 GLY 50 GLY 51 VAL 52 HIS 53 VAL 54 HIS 55 LYS 56 ASP 57 GLY 58 LEU 59 THR 60 VAL 61 THR 62 SER 63 PRO 64 VAL 65 LEU 66 MSE 67 TRP 68 VAL 69 GLN 70 ALA 71 LEU 72 ASP 73 ILE 74 ILE 75 LEU 76 GLU 77 LYS 78 MSE 79 LYS 80 ALA 81 SER 82 GLY 83 PHE 84 ASP 85 PHE 86 SER 87 GLN 88 VAL 89 LEU 90 ALA 91 LEU 92 SER 93 GLY 94 ALA 95 GLY 96 GLN 97 GLN 98 HIS 99 GLY 100 SER 101 ILE 102 TYR 103 TRP 104 LYS 105 ALA 106 GLY 107 ALA 108 GLN 109 GLN 110 ALA 111 LEU 112 THR 113 SER 114 LEU 115 SER 116 PRO 117 ASP 118 LEU 119 ARG 120 LEU 121 HIS 122 GLN 123 GLN 124 LEU 125 GLN 126 ASP 127 CYS 128 PHE 129 SER 130 ILE 131 SER 132 ASP 133 CYS 134 PRO 135 VAL 136 TRP 137 MSE 138 ASP 139 SER 140 SER 141 THR 142 THR 143 ALA 144 GLN 145 CYS 146 ARG 147 GLN 148 LEU 149 GLU 150 ALA 151 ALA 152 VAL 153 GLY 154 GLY 155 ALA 156 GLN 157 ALA 158 LEU 159 SER 160 CYS 161 LEU 162 THR 163 GLY 164 SER 165 ARG 166 ALA 167 TYR 168 GLU 169 ARG 170 PHE 171 THR 172 GLY 173 ASN 174 GLN 175 ILE 176 ALA 177 LYS 178 ILE 179 TYR 180 GLN 181 GLN 182 ASN 183 PRO 184 GLU 185 ALA 186 TYR 187 SER 188 HIS 189 THR 190 GLU 191 ARG 192 ILE 193 SER 194 LEU 195 VAL 196 SER 197 SER 198 PHE 199 ALA 200 ALA 201 SER 202 LEU 203 PHE 204 LEU 205 GLY 206 SER 207 TYR 208 SER 209 PRO 210 ILE 211 ASP 212 TYR 213 SER 214 ASP 215 GLY 216 SER 217 GLY 218 MSE 219 ASN 220 LEU 221 LEU 222 GLN 223 ILE 224 GLN 225 ASP 226 LYS 227 VAL 228 TRP 229 SER 230 GLN 231 ALA 232 CYS 233 LEU 234 GLY 235 ALA 236 CYS 237 ALA 238 PRO 239 HIS 240 LEU 241 GLU 242 GLU 243 LYS 244 LEU 245 SER 246 PRO 247 PRO 248 VAL 249 PRO 250 SER 251 CYS 252 SER 253 VAL 254 VAL 255 GLY 256 ALA 257 ILE 258 SER 259 SER 260 TYR 261 TYR 262 VAL 263 GLN 264 ARG 265 TYR 266 GLY 267 PHE 268 PRO 269 PRO 270 GLY 271 CYS 272 LYS 273 VAL 274 VAL 275 ALA 276 PHE 277 THR 278 GLY 279 ASP 280 ASN 281 PRO 282 ALA 283 SER 284 LEU 285 ALA 286 GLY 287 MSE 288 ARG 289 LEU 290 GLU 291 GLU 292 GLY 293 ASP 294 ILE 295 ALA 296 VAL 297 SER 298 LEU 299 GLY 300 THR 301 SER 302 ASP 303 THR 304 LEU 305 PHE 306 LEU 307 TRP 308 LEU 309 GLN 310 GLU 311 PRO 312 MSE 313 PRO 314 ALA 315 LEU 316 GLU 317 GLY 318 HIS 319 ILE 320 PHE 321 CYS 322 ASN 323 PRO 324 VAL 325 ASP 326 SER 327 GLN 328 HIS 329 TYR 330 MSE 331 ALA 332 LEU 333 LEU 334 CYS 335 PHE 336 LYS 337 ASN 338 GLY 339 SER 340 LEU 341 MSE 342 ARG 343 GLU 344 LYS 345 ILE 346 ARG 347 ASN 348 GLU 349 SER 350 VAL 351 SER 352 ARG 353 SER 354 TRP 355 SER 356 ASP 357 PHE 358 SER 359 LYS 360 ALA 361 LEU 362 GLN 363 SER 364 THR 365 GLU 366 MSE 367 GLY 368 ASN 369 GLY 370 GLY 371 ASN 372 LEU 373 GLY 374 PHE 375 TYR 376 PHE 377 ASP 378 VAL 379 MSE 380 GLU 381 ILE 382 THR 383 PRO 384 GLU 385 ILE 386 ILE 387 GLY 388 ARG 389 HIS 390 ARG 391 PHE 392 ASN 393 THR 394 GLU 395 ASN 396 HIS 397 LYS 398 VAL 399 ALA 400 ALA 401 PHE 402 PRO 403 GLY 404 ASP 405 VAL 406 GLU 407 VAL 408 ARG 409 ALA 410 LEU 411 ILE 412 GLU 413 GLY 414 GLN 415 PHE 416 MSE 417 ALA 418 LYS 419 ARG 420 ILE 421 HIS 422 ALA 423 GLU 424 GLY 425 LEU 426 GLY 427 TYR 428 ARG 429 VAL 430 MSE 431 SER 432 LYS 433 THR 434 LYS 435 ILE 436 LEU 437 ALA 438 THR 439 GLY 440 GLY 441 ALA 442 SER 443 HIS 444 ASN 445 ARG 446 GLU 447 ILE 448 LEU 449 GLN 450 VAL 451 LEU 452 ALA 453 ASP 454 VAL 455 PHE 456 ASP 457 ALA 458 PRO 459 VAL 460 TYR 461 VAL 462 ILE 463 ASP 464 THR 465 ALA 466 ASN 467 SER 468 ALA 469 CYS 470 VAL 471 GLY 472 SER 473 ALA 474 TYR 475 ARG 476 ALA 477 PHE 478 HIS 479 GLY 480 LEU 481 ALA 482 GLY 483 GLY 484 THR 485 ASP 486 VAL 487 PRO 488 PHE 489 SER 490 GLU 491 VAL 492 VAL 493 LYS 494 LEU 495 ALA 496 PRO 497 ASN 498 PRO 499 ARG 500 LEU 501 ALA 502 ALA 503 THR 504 PRO 505 SER 506 PRO 507 GLY 508 ALA 509 SER 510 GLN 511 VAL 512 TYR 513 GLU 514 ALA 515 LEU 516 LEU 517 PRO 518 GLN 519 TYR 520 ALA 521 LYS 522 LEU 523 GLU 524 GLN 525 ARG 526 ILE 527 LEU 528 SER 529 GLN 530 THR 531 ARG 532
Unit 2	PRO 6 ARG 7 ARG 8 CYS 9 CYS 10 LEU 11 GLY 12 TRP 13 ASP 14 PHE 15 SER 16 THR 17 GLN 18 GLN 19 VAL 20 LYS 21 VAL 22 VAL 23 ALA 24 VAL 25 ASP 26 ALA 27 GLU 28 LEU 29 ASN 30 VAL 31 PHE 32 TYR 33 GLU 34 GLU 35 SER 36 VAL 37 HIS 38 PHE 39 ASP 40 ARG 41 ASP 42 LEU 43 PRO 44 GLU 45 PHE 46 GLY 47 THR 48 GLN 49 GLY 50 GLY 51 VAL 52 HIS 53 VAL 54 HIS 55 LYS 56 ASP 57 GLY 58 LEU 59 THR 60 VAL 61 THR 62 SER 63 PRO 64 VAL 65 LEU 66 MSE 67 TRP 68 VAL 69 GLN 70 ALA 71 LEU 72 ASP 73 ILE 74 ILE 75 LEU 76 GLU 77 LYS 78 MSE 79 LYS 80 ALA 81 SER 82 GLY 83 PHE 84 ASP 85 PHE 86 SER 87 GLN 88 VAL 89 LEU 90 ALA 91 LEU 92 SER 93 GLY 94 ALA 95 GLY 96 GLN 97 GLN 98 HIS 99 GLY 100 SER 101 ILE 102 TYR 103 TRP 104 LYS 105 ALA 106 GLY 107 ALA 108 GLN 109 GLN 110 ALA 111 LEU 112 THR 113 SER 114 LEU 115 SER 116 PRO 117 ASP 118 LEU 119 ARG 120 LEU 121 HIS 122 GLN 123 GLN 124 LEU 125 GLN 126 ASP 127 CYS 128 PHE 129 SER 130 ILE 131 SER 132 ASP 133 CYS 134 PRO 135 VAL 136 TRP 137 MSE 138 ASP 139 SER 140 SER 141 THR 142 THR 143 ALA 144 GLN 145 CYS 146 ARG 147 GLN 148 LEU 149 GLU 150 ALA 151 ALA 152 VAL 153 GLY 154 GLY 155 ALA 156 GLN 157 ALA 158 LEU 159 SER 160 CYS 161 LEU 162 THR 163 GLY 164 SER 165 ARG 166 ALA 167 TYR 168 GLU 169 ARG 170 PHE 171 THR 172 GLY 173 ASN 174 GLN 175 ILE 176 ALA 177 LYS 178 ILE 179 TYR 180 GLN 181 GLN 182 ASN 183 PRO 184 GLU 185 ALA 186 TYR 187 SER 188 HIS 189 THR 190 GLU 191 ARG 192 ILE 193 SER 194 LEU 195 VAL 196 SER 197 SER 198 PHE 199 ALA 200 ALA 201 SER 202 LEU 203 PHE 204 LEU 205 GLY 206 SER 207 TYR 208 SER 209 PRO 210 ILE 211 ASP 212 TYR 213 SER 214 ASP 215 GLY 216 SER 217 GLY 218 MSE 219 ASN 220 LEU 221 LEU 222 GLN 223 ILE 224 GLN 225 ASP 226 LYS 227 VAL 228 TRP 229 SER 230 GLN 231 ALA 232 CYS 233 LEU 234 GLY 235 ALA 236 CYS 237 ALA 238 PRO 239 HIS 240 LEU 241 GLU 242 GLU 243 LYS 244 LEU 245 SER 246 PRO 247 PRO 248 VAL 249 PRO 250 SER 251 CYS 252 SER 253 VAL 254 VAL 255 GLY 256 ALA 257 ILE 258 SER 259 SER 260 TYR 261 TYR 262 VAL 263 GLN 264 ARG 265 TYR 266 GLY 267 PHE 268 PRO 269 PRO 270 GLY 271 CYS 272 LYS 273 VAL 274 VAL 275 ALA 276 PHE 277 THR 278 GLY 279 ASP 280 ASN 281 PRO 282 ALA 283 SER 284 LEU 285 ALA 286 GLY 287 MSE 288 ARG 289 LEU 290 GLU 291 GLU 292 GLY 293 ASP 294 ILE 295 ALA 296 VAL 297 SER 298 LEU 299 GLY 300 THR 301 SER 302 ASP 303 THR 304 LEU 305 PHE 306 LEU 307 TRP 308 LEU 309 GLN 310 GLU 311 PRO 312 MSE 313 PRO 314 ALA 315 LEU 316 GLU 317 GLY 318 HIS 319 ILE 320 PHE 321 CYS 322 ASN 323 PRO 324 VAL 325 ASP 326 SER 327 GLN 328 HIS 329 TYR 330 MSE 331 ALA 332 LEU 333 LEU 334 CYS 335 PHE 336 LYS 337 ASN 338 GLY 339 SER 340 LEU 341 MSE 342 ARG 343 GLU 344 LYS 345 ILE 346 ARG 347 ASN 348 GLU 349 SER 350 VAL 351 SER 352 ARG 353 SER 354 TRP 355 SER 356 ASP 357 PHE 358 SER 359 LYS 360 ALA 361 LEU 362 GLN 363 SER 364 THR 365 GLU 366 MSE 367 GLY 368 ASN 369 GLY 370 GLY 371 ASN 372 LEU 373 GLY 374 PHE 375 TYR 376 PHE 377 ASP 378 VAL 379 MSE 380 GLU 381 ILE 382 THR 383 PRO 384 GLU 385 ILE 386 ILE 387 GLY 388 ARG 389 HIS 390 ARG 391 PHE 392 ASN 393 THR 394 GLU 395 ASN 396 HIS 397 LYS 398 VAL 399 ALA 400 ALA 401 PHE 402 PRO 403 GLY 404 ASP 405 VAL 406 GLU 407 VAL 408 ARG 409 ALA 410 LEU 411 ILE 412 GLU 413 GLY 414 GLN 415 PHE 416 MSE 417 ALA 418 LYS 419 ARG 420 ILE 421 HIS 422 ALA 423 GLU 424 GLY 425 LEU 426 GLY 427 TYR 428 ARG 429 VAL 430 MSE 431 SER 432 LYS 433 THR 434 LYS 435 ILE 436 LEU 437 ALA 438 THR 439 GLY 440 GLY 441 ALA 442 SER 443 HIS 444 ASN 445 ARG 446 GLU 447 ILE 448 LEU 449 GLN 450 VAL 451 LEU 452 ALA 453 ASP 454 VAL 455 PHE 456 ASP 457 ALA 458 PRO 459 VAL 460 TYR 461 VAL 462 ILE 463 ASP 464 THR 465 ALA 466 ASN 467 SER 468 ALA 469 CYS 470 VAL 471 GLY 472 SER 473 ALA 474 TYR 475 ARG 476 ALA 477 PHE 478 HIS 479 GLY 480 LEU 481 ALA 482 GLY 483 GLY 484 THR 485 ASP 486 VAL 487 PRO 488 PHE 489 SER 490 GLU 491 VAL 492 VAL 493 LYS 494 LEU 495 ALA 496 PRO 497 ASN 498 PRO 499 ARG 500 LEU 501 ALA 502 ALA 503 THR 504 PRO 505 SER 506 PRO 507 GLY 508 ALA 509 SER 510 GLN 511 VAL 512 TYR 513 GLU 514 ALA 515 LEU 516 LEU 517 PRO 518 GLN 519 TYR 520 ALA 521 LYS 522 LEU 523 GLU 524 GLN 525 ARG 526 ILE 527 LEU 528 SER 529 GLN 530 THR 531 ARG 532
Unit 3	PRO 6 ARG 7 ARG 8 CYS 9 CYS 10 LEU 11 GLY 12 TRP 13 ASP 14 PHE 15 SER 16 THR 17 GLN 18 GLN 19 VAL 20 LYS 21 VAL 22 VAL 23 ALA 24 VAL 25 ASP 26 ALA 27 GLU 28 LEU 29 ASN 30 VAL 31 PHE 32 TYR 33 GLU 34 GLU 35 SER 36 VAL 37 HIS 38 PHE 39 ASP 40 ARG 41 ASP 42 LEU 43 PRO 44 GLU 45 PHE 46 GLY 47 THR 48 GLN 49 GLY 50 GLY 51 VAL 52 HIS 53 VAL 54 HIS 55 LYS 56 ASP 57 GLY 58 LEU 59 THR 60 VAL 61 THR 62 SER 63 PRO 64 VAL 65 LEU 66 MSE 67 TRP 68 VAL 69 GLN 70 ALA 71 LEU 72 ASP 73 ILE 74 ILE 75 LEU 76 GLU 77 LYS 78 MSE 79 LYS 80 ALA 81 SER 82 GLY 83 PHE 84 ASP 85 PHE 86 SER 87 GLN 88 VAL 89 LEU 90 ALA 91 LEU 92 SER 93 GLY 94 ALA 95 GLY 96 GLN 97 GLN 98 HIS 99 GLY 100 SER 101 ILE 102 TYR 103 TRP 104 LYS 105 ALA 106 GLY 107 ALA 108 GLN 109 GLN 110 ALA 111 LEU 112 THR 113 SER 114 LEU 115 SER 116 PRO 117 ASP 118 LEU 119 ARG 120 LEU 121 HIS 122 GLN 123 GLN 124 LEU 125 GLN 126 ASP 127 CYS 128 PHE 129 SER 130 ILE 131 SER 132 ASP 133 CYS 134 PRO 135 VAL 136 TRP 137 MSE 138 ASP 139 SER 140 SER 141 THR 142 THR 143 ALA 144 GLN 145 CYS 146 ARG 147 GLN 148 LEU 149 GLU 150 ALA 151 ALA 152 VAL 153 GLY 154 GLY 155 ALA 156 GLN 157 ALA 158 LEU 159 SER 160 CYS 161 LEU 162 THR 163 GLY 164 SER 165 ARG 166 ALA 167 TYR 168 GLU 169 ARG 170 PHE 171 THR 172 GLY 173 ASN 174 GLN 175 ILE 176 ALA 177 LYS 178 ILE 179 TYR 180 GLN 181 GLN 182 ASN 183 PRO 184 GLU 185 ALA 186 TYR 187 SER 188 HIS 189 THR 190 GLU 191 ARG 192 ILE 193 SER 194 LEU 195 VAL 196 SER 197 SER 198 PHE 199 ALA 200 ALA 201 SER 202 LEU 203 PHE 204 LEU 205 GLY 206 SER 207 TYR 208 SER 209 PRO 210 ILE 211 ASP 212 TYR 213 SER 214 ASP 215 GLY 216 SER 217 GLY 218 MSE 219 ASN 220 LEU 221 LEU 222 GLN 223 ILE 224 GLN 225 ASP 226 LYS 227 VAL 228 TRP 229 SER 230 GLN 231 ALA 232 CYS 233 LEU 234 GLY 235 ALA 236 CYS 237 ALA 238 PRO 239 HIS 240 LEU 241 GLU 242 GLU 243 LYS 244 LEU 245 SER 246 PRO 247 PRO 248 VAL 249 PRO 250 SER 251 CYS 252 SER 253 VAL 254 VAL 255 GLY 256 ALA 257 ILE 258 SER 259 SER 260 TYR 261 TYR 262 VAL 263 GLN 264 ARG 265 TYR 266 GLY 267 PHE 268 PRO 269 PRO 270 GLY 271 CYS 272 LYS 273 VAL 274 VAL 275 ALA 276 PHE 277 THR 278 GLY 279 ASP 280 ASN 281 PRO 282 ALA 283 SER 284 LEU 285 ALA 286 GLY 287 MSE 288 ARG 289 LEU 290 GLU 291 GLU 292 GLY 293 ASP 294 ILE 295 ALA 296 VAL 297 SER 298 LEU 299 GLY 300 THR 301 SER 302 ASP 303 THR 304 LEU 305 PHE 306 LEU 307 TRP 308 LEU 309 GLN 310 GLU 311 PRO 312 MSE 313 PRO 314 ALA 315 LEU 316 GLU 317 GLY 318 HIS 319 ILE 320 PHE 321 CYS 322 ASN 323 PRO 324 VAL 325 ASP 326 SER 327 GLN 328 HIS 329 TYR 330 MSE 331 ALA 332 LEU 333 LEU 334 CYS 335 PHE 336 LYS 337 ASN 338 GLY 339 SER 340 LEU 341 MSE 342 ARG 343 GLU 344 LYS 345 ILE 346 ARG 347 ASN 348 GLU 349 SER 350 VAL 351 SER 352 ARG 353 SER 354 TRP 355 SER 356 ASP 357 PHE 358 SER 359 LYS 360 ALA 361 LEU 362 GLN 363 SER 364 THR 365 GLU 366 MSE 367 GLY 368 ASN 369 GLY 370 GLY 371 ASN 372 LEU 373 GLY 374 PHE 375 TYR 376 PHE 377 ASP 378 VAL 379 MSE 380 GLU 381 ILE 382 THR 383 PRO 384 GLU 385 ILE 386 ILE 387 GLY 388 ARG 389 HIS 390 ARG 391 PHE 392 ASN 393 THR 394 GLU 395 ASN 396 HIS 397 LYS 398 VAL 399 ALA 400 ALA 401 PHE 402 PRO 403 GLY 404 ASP 405 VAL 406 GLU 407 VAL 408 ARG 409 ALA 410 LEU 411 ILE 412 GLU 413 GLY 414 GLN 415 PHE 416 MSE 417 ALA 418 LYS 419 ARG 420 ILE 421 HIS 422 ALA 423 GLU 424 GLY 425 LEU 426 GLY 427 TYR 428 ARG 429 VAL 430 MSE 431 SER 432 LYS 433 THR 434 LYS 435 ILE 436 LEU 437 ALA 438 THR 439 GLY 440 GLY 441 ALA 442 SER 443 HIS 444 ASN 445 ARG 446 GLU 447 ILE 448 LEU 449 GLN 450 VAL 451 LEU 452 ALA 453 ASP 454 VAL 455 PHE 456 ASP 457 ALA 458 PRO 459 VAL 460 TYR 461 VAL 462 ILE 463 ASP 464 THR 465 ALA 466 ASN 467 SER 468 ALA 469 CYS 470 VAL 471 GLY 472 SER 473 ALA 474 TYR 475 ARG 476 ALA 477 PHE 478 HIS 479 GLY 480 LEU 481 ALA 482 GLY 483 GLY 484 THR 485 ASP 486 VAL 487 PRO 488 PHE 489 SER 490 GLU 491 VAL 492 VAL 493 LYS 494 LEU 495 ALA 496 PRO 497 ASN 498 PRO 499 ARG 500 LEU 501 ALA 502 ALA 503 THR 504 PRO 505 SER 506 PRO 507 GLY 508 ALA 509 SER 510 GLN 511 VAL 512 TYR 513 GLU 514 ALA 515 LEU 516 LEU 517 PRO 518 GLN 519 TYR 520 ALA 521 LYS 522 LEU 523 GLU 524 GLN 525 ARG 526 ILE 527 LEU 528 SER 529 GLN 530 THR 531 ARG 532

Ligands

Unit 4	ADP 1533 XUL 1534
Unit 5	ADP 1533 XUL 1534 EDO 1535
Unit 6	ADP 1533 XUL 1534