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Sequence, Chains, Asymmetric and Biological Units

Title OPTIMISATION OF PYRROLEAMIDES AS MYCOBACTERIAL GYRB ATPASE I STRUCTURE ACTIVITY RELATIONSHIP AND IN VIVO EFFICACY IN THE MODEL OF TUBERCULOSIS
Keywords ISOMERASE, DNA TOPOISOMERASE, INHIBITOR
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4BAE     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA GYRASE SUBUNIT B  A 184 1358 0
2  Protein   DNA GYRASE SUBUNIT B  B 183 1378 0
3  Protein   DNA GYRASE SUBUNIT B  C 184 1392 0
4  Protein   DNA GYRASE SUBUNIT B  D 185 1404 0
5  Ligand   DNA GYRASE SUBUNIT B  A 3 0 39
6  Ligand   DNA GYRASE SUBUNIT B  B 2 0 38
7  Ligand   DNA GYRASE SUBUNIT B  C 3 0 39
8  Ligand   DNA GYRASE SUBUNIT B  D 4 0 40
9 Water     149 0 149
total       897 5532 305

Proteins
Unit 1 GLY22 LEU23 GLU24 ALA25 VAL26 ARG27 LYS28 ARG29 PRO30 GLY31 MET32 TYR33 ILE34 GLY35 SER36 THR37 GLY38 GLU39 ARG40 GLY41 LEU42 HIS43 HIS44 LEU45 ILE46 TRP47 GLU48 VAL49 VAL50 ASP51 ASN52 ALA53 VAL54 ASP55 GLU56 ALA57 MET58 ALA59 GLY60 PHE61 ALA62 THR63 ARG64 VAL65 ASP66 VAL67 LYS68 ILE69 HIS70 ALA71 ASP72 GLY73 SER74 VAL75 GLU76 VAL77 ARG78 ASP79 ASP80 GLY81 ARG82 GLY83 ILE84 PRO85 VAL86 GLU87 MET88 HIS89 ALA90 THR91 GLY92 MET93 PRO94 THR95 ILE96 ASP97 VAL98 VAL99 MET100 THR101 GLN102 LEU103 HIS121 GLY122 VAL123 GLY124 VAL125 SER126 VAL127 VAL128 ASN129 ALA130 LEU131 SER132 THR133 ARG134 LEU135 GLU136 ALA137 THR138 VAL139 LEU140 ARG141 ASP142 GLY143 TYR144 GLU145 TRP146 PHE147 GLN148 TYR149 TYR150 ASP151 ARG152 SER153 VAL154 PRO155 GLY156 LYS157 LEU158 LYS159 GLN160 GLY161 GLY162 GLU163 THR164 LYS165 GLU166 THR167 GLY168 THR169 THR170 ILE171 ARG172 PHE173 TRP174 ALA175 ASP176 PRO177 GLU178 ILE179 PHE180 GLU181 THR182 THR183 ASP184 TYR185 ASN186 PHE187 GLU188 THR189 VAL190 ALA191 ARG192 ARG193 LEU194 GLN195 GLU196 MET197 ALA198 PHE199 LEU200 ASN201 LYS202 GLY203 LEU204 THR205 ILE206 GLU207 LEU208 THR209 ASP210 GLU211 ARG212 ASP213 GLY246 LYS247 HIS248 ARG249 VAL250 PHE251 HIS252 TYR253 PRO254
Unit 2 GLY22 LEU23 GLU24 ALA25 VAL26 ARG27 LYS28 ARG29 PRO30 GLY31 MET32 TYR33 ILE34 GLY35 SER36 THR37 GLY38 GLU39 ARG40 GLY41 LEU42 HIS43 HIS44 LEU45 ILE46 TRP47 GLU48 VAL49 VAL50 ASP51 ASN52 ALA53 VAL54 ASP55 GLU56 ALA57 MET58 ALA59 GLY60 PHE61 ALA62 THR63 ARG64 VAL65 ASP66 VAL67 LYS68 ILE69 HIS70 ALA71 ASP72 GLY73 SER74 VAL75 GLU76 VAL77 ARG78 ASP79 ASP80 GLY81 ARG82 GLY83 ILE84 PRO85 VAL86 GLU87 MET88 HIS89 ALA90 THR91 GLY92 MET93 PRO94 THR95 ILE96 ASP97 VAL98 VAL99 MET100 THR101 GLN102 LEU103 GLY122 VAL123 GLY124 VAL125 SER126 VAL127 VAL128 ASN129 ALA130 LEU131 SER132 THR133 ARG134 LEU135 GLU136 ALA137 THR138 VAL139 LEU140 ARG141 ASP142 GLY143 TYR144 GLU145 TRP146 PHE147 GLN148 TYR149 TYR150 ASP151 ARG152 SER153 VAL154 PRO155 GLY156 LYS157 LEU158 LYS159 GLN160 GLY161 GLY162 GLU163 THR164 LYS165 GLU166 THR167 GLY168 THR169 THR170 ILE171 ARG172 PHE173 TRP174 ALA175 ASP176 PRO177 GLU178 ILE179 PHE180 GLU181 THR182 THR183 ASP184 TYR185 ASN186 PHE187 GLU188 THR189 VAL190 ALA191 ARG192 ARG193 LEU194 GLN195 GLU196 MET197 ALA198 PHE199 LEU200 ASN201 LYS202 GLY203 LEU204 THR205 ILE206 GLU207 LEU208 THR209 ASP210 GLU211 ARG212 ASP213 GLY246 LYS247 HIS248 ARG249 VAL250 PHE251 HIS252 TYR253 PRO254
Unit 3 GLY22 LEU23 GLU24 ALA25 VAL26 ARG27 LYS28 ARG29 PRO30 GLY31 MET32 TYR33 ILE34 GLY35 SER36 THR37 GLY38 GLU39 ARG40 GLY41 LEU42 HIS43 HIS44 LEU45 ILE46 TRP47 GLU48 VAL49 VAL50 ASP51 ASN52 ALA53 VAL54 ASP55 GLU56 ALA57 MET58 ALA59 GLY60 PHE61 ALA62 THR63 ARG64 VAL65 ASP66 VAL67 LYS68 ILE69 HIS70 ALA71 ASP72 GLY73 SER74 VAL75 GLU76 VAL77 ARG78 ASP79 ASP80 GLY81 ARG82 GLY83 ILE84 PRO85 VAL86 GLU87 MET88 HIS89 ALA90 THR91 GLY92 MET93 PRO94 THR95 ILE96 ASP97 VAL98 VAL99 MET100 THR101 GLN102 LEU103 HIS121 GLY122 VAL123 GLY124 VAL125 SER126 VAL127 VAL128 ASN129 ALA130 LEU131 SER132 THR133 ARG134 LEU135 GLU136 ALA137 THR138 VAL139 LEU140 ARG141 ASP142 GLY143 TYR144 GLU145 TRP146 PHE147 GLN148 TYR149 TYR150 ASP151 ARG152 SER153 VAL154 PRO155 GLY156 LYS157 LEU158 LYS159 GLN160 GLY161 GLY162 GLU163 THR164 LYS165 GLU166 THR167 GLY168 THR169 THR170 ILE171 ARG172 PHE173 TRP174 ALA175 ASP176 PRO177 GLU178 ILE179 PHE180 GLU181 THR182 THR183 ASP184 TYR185 ASN186 PHE187 GLU188 THR189 VAL190 ALA191 ARG192 ARG193 LEU194 GLN195 GLU196 MET197 ALA198 PHE199 LEU200 ASN201 LYS202 GLY203 LEU204 THR205 ILE206 GLU207 LEU208 THR209 ASP210 GLU211 ARG212 ASP213 GLY246 LYS247 HIS248 ARG249 VAL250 PHE251 HIS252 TYR253 PRO254
Unit 4 GLY22 LEU23 GLU24 ALA25 VAL26 ARG27 LYS28 ARG29 PRO30 GLY31 MET32 TYR33 ILE34 GLY35 SER36 THR37 GLY38 GLU39 ARG40 GLY41 LEU42 HIS43 HIS44 LEU45 ILE46 TRP47 GLU48 VAL49 VAL50 ASP51 ASN52 ALA53 VAL54 ASP55 GLU56 ALA57 MET58 ALA59 GLY60 PHE61 ALA62 THR63 ARG64 VAL65 ASP66 VAL67 LYS68 ILE69 HIS70 ALA71 ASP72 GLY73 SER74 VAL75 GLU76 VAL77 ARG78 ASP79 ASP80 GLY81 ARG82 GLY83 ILE84 PRO85 VAL86 GLU87 MET88 HIS89 ALA90 THR91 GLY92 MET93 PRO94 THR95 ILE96 ASP97 VAL98 VAL99 MET100 THR101 GLN102 LEU103 HIS121 GLY122 VAL123 GLY124 VAL125 SER126 VAL127 VAL128 ASN129 ALA130 LEU131 SER132 THR133 ARG134 LEU135 GLU136 ALA137 THR138 VAL139 LEU140 ARG141 ASP142 GLY143 TYR144 GLU145 TRP146 PHE147 GLN148 TYR149 TYR150 ASP151 ARG152 SER153 VAL154 PRO155 GLY156 LYS157 LEU158 LYS159 GLN160 GLY161 GLY162 GLU163 THR164 LYS165 GLU166 THR167 GLY168 THR169 THR170 ILE171 ARG172 PHE173 TRP174 ALA175 ASP176 PRO177 GLU178 ILE179 PHE180 GLU181 THR182 THR183 ASP184 TYR185 ASN186 PHE187 GLU188 THR189 VAL190 ALA191 ARG192 ARG193 LEU194 GLN195 GLU196 MET197 ALA198 PHE199 LEU200 ASN201 LYS202 GLY203 LEU204 THR205 ILE206 GLU207 LEU208 THR209 ASP210 GLU211 ARG212 ASP213 GLY246 LYS247 HIS248 ARG249 VAL250 PHE251 HIS252 TYR253 PRO254 GLY255

Ligands
Unit 5 CA1255 RWX1256 SO41257
Unit 6 RWX1255 SO41256
Unit 7 CA1255 RWX1256 SO41257
Unit 8 CA1256 RWX1257 SO41258 CA1259

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany