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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE RUBELLA VIRUS GLYCOPROTEIN E1 IN IT FUSION FORM CRYSTALLIZED IN PRESENCE OF 20MM OF CALCIUM ACE
Keywords VIRAL PROTEIN, ENVELOPE GLYCOPROTEIN, MEMBRANE FUSION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4B3V     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   E1 ENVELOPE GLYCOPROTEIN  A 431 3235 0
2  Protein   E1 ENVELOPE GLYCOPROTEIN  B 432 3236 0
3  Protein   E1 ENVELOPE GLYCOPROTEIN  C 432 3236 0
4  Ligand   E1 ENVELOPE GLYCOPROTEIN  A 13 0 81
5  Ligand   E1 ENVELOPE GLYCOPROTEIN  B 11 0 66
6  Ligand   E1 ENVELOPE GLYCOPROTEIN  C 13 0 95
7 Water     1131 0 1131
total       2463 9707 1373

Proteins
Unit 1 GLU2 ALA3 PHE4 THR5 TYR6 LEU7 CYS8 THR9 ALA10 PRO11 GLY12 CYS13 ALA14 THR15 GLN16 THR17 PRO18 VAL19 PRO20 VAL21 ARG22 LEU23 ALA24 GLY25 VAL26 ARG27 PHE28 GLU29 SER30 LYS31 ILE32 VAL33 ASP34 GLY35 GLY36 CYS37 PHE38 ALA39 PRO40 TRP41 ASP42 LEU43 GLU44 ALA45 THR46 GLY47 ALA48 CYS49 ILE50 CYS51 GLU52 ILE53 PRO54 THR55 ASP56 VAL57 SER58 CYS59 GLU60 GLY61 LEU62 GLY63 ALA64 TRP65 VAL66 PRO67 THR68 ALA69 PRO70 CYS71 ALA72 ARG73 ILE74 TRP75 ASN76 GLY77 THR78 GLN79 ARG80 ALA81 CYS82 THR83 PHE84 TRP85 ALA86 VAL87 ASN88 ALA89 TYR90 SER91 SER92 GLY93 GLY94 TYR95 ALA96 GLN97 LEU98 ALA99 SER100 TYR101 PHE102 ASN103 PRO104 GLY105 GLY106 SER107 TYR108 TYR109 LYS110 GLN111 TYR112 HIS113 PRO114 THR115 ALA116 CYS117 GLU118 VAL119 GLU120 PRO121 ALA122 PHE123 GLY124 HIS125 SER126 ASP127 ALA128 ALA129 CYS130 TRP131 GLY132 PHE133 PRO134 THR135 ASP136 THR137 VAL138 MET139 SER140 VAL141 PHE142 ALA143 LEU144 ALA145 SER146 TYR147 VAL148 GLN149 HIS150 PRO151 HIS152 LYS153 THR154 VAL155 ARG156 VAL157 LYS158 PHE159 HIS160 THR161 GLU162 THR163 ARG164 THR165 VAL166 TRP167 GLN168 LEU169 SER170 VAL171 ALA172 GLY173 VAL174 SER175 CYS176 ASN177 VAL178 THR179 THR180 GLU181 HIS182 PRO183 PHE184 CYS185 ASN186 THR187 PRO188 HIS189 GLY190 GLN191 LEU192 GLU193 VAL194 GLN195 VAL196 PRO197 PRO198 ASP199 PRO200 GLY201 ASP202 LEU203 VAL204 GLU205 TYR206 ILE207 MET208 ASN209 ASN213 GLN214 GLN215 SER216 ARG217 TRP218 GLY219 LEU220 GLY221 SER222 PRO223 ASN224 CYS225 HIS226 GLY227 PRO228 ASP229 TRP230 ALA231 SER232 PRO233 VAL234 CYS235 GLN236 ARG237 HIS238 SER239 PRO240 ASP241 CYS242 SER243 ARG244 LEU245 VAL246 GLY247 ALA248 THR249 PRO250 GLU251 ARG252 PRO253 ARG254 LEU255 ARG256 LEU257 VAL258 ASP259 ALA260 ASP261 ASP262 PRO263 LEU264 LEU265 ARG266 THR267 ALA268 PRO269 GLY270 PRO271 GLY272 GLU273 VAL274 TRP275 VAL276 THR277 PRO278 VAL279 ILE280 GLY281 SER282 GLN283 ALA284 ARG285 LYS286 CYS287 GLY288 LEU289 HIS290 ILE291 ARG292 ALA293 GLY294 PRO295 TYR296 GLY297 HIS298 ALA299 THR300 VAL301 GLU302 MET303 PRO304 GLU305 TRP306 ILE307 HIS308 ALA309 HIS310 THR311 THR312 SER313 ASP314 PRO315 TRP316 HIS317 PRO318 PRO319 GLY320 PRO321 LEU322 GLY323 LEU324 LYS325 PHE326 LYS327 THR328 VAL329 ARG330 PRO331 VAL332 ALA333 LEU334 PRO335 ARG336 ALA337 LEU338 ALA339 PRO340 PRO341 ARG342 ASN343 VAL344 ARG345 VAL346 THR347 GLY348 CYS349 TYR350 GLN351 CYS352 GLY353 THR354 PRO355 ALA356 LEU357 VAL358 GLU359 GLY360 LEU361 ALA362 PRO363 GLY364 GLY365 GLY366 ASN367 CYS368 HIS369 LEU370 THR371 VAL372 ASN373 GLY374 GLU375 ASP376 VAL377 GLY378 ALA379 PHE380 PRO381 PRO382 GLY383 LYS384 PHE385 VAL386 THR387 ALA388 ALA389 LEU390 LEU391 ASN392 THR393 PRO394 PRO395 PRO396 TYR397 GLN398 VAL399 SER400 CYS401 GLY402 GLY403 GLU404 SER405 ASP406 ARG407 ALA408 SER409 ALA410 ARG411 VAL412 ILE413 ASP414 PRO415 ALA416 ALA417 GLN418 SER419 PHE420 THR421 GLY422 VAL423 VAL424 TYR425 GLY426 THR427 HIS428 THR429 THR430 ALA431 VAL432 SER433 GLU434 THR435
Unit 2 GLU2 ALA3 PHE4 THR5 TYR6 LEU7 CYS8 THR9 ALA10 PRO11 GLY12 CYS13 ALA14 THR15 GLN16 THR17 PRO18 VAL19 PRO20 VAL21 ARG22 LEU23 ALA24 GLY25 VAL26 ARG27 PHE28 GLU29 SER30 LYS31 ILE32 VAL33 ASP34 GLY35 GLY36 CYS37 PHE38 ALA39 PRO40 TRP41 ASP42 LEU43 GLU44 ALA45 THR46 GLY47 ALA48 CYS49 ILE50 CYS51 GLU52 ILE53 PRO54 THR55 ASP56 VAL57 SER58 CYS59 GLU60 GLY61 LEU62 GLY63 ALA64 TRP65 VAL66 PRO67 THR68 ALA69 PRO70 CYS71 ALA72 ARG73 ILE74 TRP75 ASN76 GLY77 THR78 GLN79 ARG80 ALA81 CYS82 THR83 PHE84 TRP85 ALA86 VAL87 ASN88 ALA89 TYR90 SER91 SER92 GLY93 GLY94 TYR95 ALA96 GLN97 LEU98 ALA99 SER100 TYR101 PHE102 ASN103 PRO104 GLY105 GLY106 SER107 TYR108 TYR109 LYS110 GLN111 TYR112 HIS113 PRO114 THR115 ALA116 CYS117 GLU118 VAL119 GLU120 PRO121 ALA122 PHE123 GLY124 HIS125 SER126 ASP127 ALA128 ALA129 CYS130 TRP131 GLY132 PHE133 PRO134 THR135 ASP136 THR137 VAL138 MET139 SER140 VAL141 PHE142 ALA143 LEU144 ALA145 SER146 TYR147 VAL148 GLN149 HIS150 PRO151 HIS152 LYS153 THR154 VAL155 ARG156 VAL157 LYS158 PHE159 HIS160 THR161 GLU162 THR163 ARG164 THR165 VAL166 TRP167 GLN168 LEU169 SER170 VAL171 ALA172 GLY173 VAL174 SER175 CYS176 ASN177 VAL178 THR179 THR180 GLU181 HIS182 PRO183 PHE184 CYS185 ASN186 THR187 PRO188 HIS189 GLY190 GLN191 LEU192 GLU193 VAL194 GLN195 VAL196 PRO197 PRO198 ASP199 PRO200 GLY201 ASP202 LEU203 VAL204 GLU205 TYR206 ILE207 MET208 ASN209 TYR210 ASN213 GLN214 GLN215 SER216 ARG217 TRP218 GLY219 LEU220 GLY221 SER222 PRO223 ASN224 CYS225 HIS226 GLY227 PRO228 ASP229 TRP230 ALA231 SER232 PRO233 VAL234 CYS235 GLN236 ARG237 HIS238 SER239 PRO240 ASP241 CYS242 SER243 ARG244 LEU245 VAL246 GLY247 ALA248 THR249 PRO250 GLU251 ARG252 PRO253 ARG254 LEU255 ARG256 LEU257 VAL258 ASP259 ALA260 ASP261 ASP262 PRO263 LEU264 LEU265 ARG266 THR267 ALA268 PRO269 GLY270 PRO271 GLY272 GLU273 VAL274 TRP275 VAL276 THR277 PRO278 VAL279 ILE280 GLY281 SER282 GLN283 ALA284 ARG285 LYS286 CYS287 GLY288 LEU289 HIS290 ILE291 ARG292 ALA293 GLY294 PRO295 TYR296 GLY297 HIS298 ALA299 THR300 VAL301 GLU302 MET303 PRO304 GLU305 TRP306 ILE307 HIS308 ALA309 HIS310 THR311 THR312 SER313 ASP314 PRO315 TRP316 HIS317 PRO318 PRO319 GLY320 PRO321 LEU322 GLY323 LEU324 LYS325 PHE326 LYS327 THR328 VAL329 ARG330 PRO331 VAL332 ALA333 LEU334 PRO335 ARG336 ALA337 LEU338 ALA339 PRO340 PRO341 ARG342 ASN343 VAL344 ARG345 VAL346 THR347 GLY348 CYS349 TYR350 GLN351 CYS352 GLY353 THR354 PRO355 ALA356 LEU357 VAL358 GLU359 GLY360 LEU361 ALA362 PRO363 GLY364 GLY365 GLY366 ASN367 CYS368 HIS369 LEU370 THR371 VAL372 ASN373 GLY374 GLU375 ASP376 VAL377 GLY378 ALA379 PHE380 PRO381 PRO382 GLY383 LYS384 PHE385 VAL386 THR387 ALA388 ALA389 LEU390 LEU391 ASN392 THR393 PRO394 PRO395 PRO396 TYR397 GLN398 VAL399 SER400 CYS401 GLY402 GLY403 GLU404 SER405 ASP406 ARG407 ALA408 SER409 ALA410 ARG411 VAL412 ILE413 ASP414 PRO415 ALA416 ALA417 GLN418 SER419 PHE420 THR421 GLY422 VAL423 VAL424 TYR425 GLY426 THR427 HIS428 THR429 THR430 ALA431 VAL432 SER433 GLU434 THR435
Unit 3 GLU2 ALA3 PHE4 THR5 TYR6 LEU7 CYS8 THR9 ALA10 PRO11 GLY12 CYS13 ALA14 THR15 GLN16 THR17 PRO18 VAL19 PRO20 VAL21 ARG22 LEU23 ALA24 GLY25 VAL26 ARG27 PHE28 GLU29 SER30 LYS31 ILE32 VAL33 ASP34 GLY35 GLY36 CYS37 PHE38 ALA39 PRO40 TRP41 ASP42 LEU43 GLU44 ALA45 THR46 GLY47 ALA48 CYS49 ILE50 CYS51 GLU52 ILE53 PRO54 THR55 ASP56 VAL57 SER58 CYS59 GLU60 GLY61 LEU62 GLY63 ALA64 TRP65 VAL66 PRO67 THR68 ALA69 PRO70 CYS71 ALA72 ARG73 ILE74 TRP75 ASN76 GLY77 THR78 GLN79 ARG80 ALA81 CYS82 THR83 PHE84 TRP85 ALA86 VAL87 ASN88 ALA89 TYR90 SER91 SER92 GLY93 GLY94 TYR95 ALA96 GLN97 LEU98 ALA99 SER100 TYR101 PHE102 ASN103 PRO104 GLY105 GLY106 SER107 TYR108 TYR109 LYS110 GLN111 TYR112 HIS113 PRO114 THR115 ALA116 CYS117 GLU118 VAL119 GLU120 PRO121 ALA122 PHE123 GLY124 HIS125 SER126 ASP127 ALA128 ALA129 CYS130 TRP131 GLY132 PHE133 PRO134 THR135 ASP136 THR137 VAL138 MET139 SER140 VAL141 PHE142 ALA143 LEU144 ALA145 SER146 TYR147 VAL148 GLN149 HIS150 PRO151 HIS152 LYS153 THR154 VAL155 ARG156 VAL157 LYS158 PHE159 HIS160 THR161 GLU162 THR163 ARG164 THR165 VAL166 TRP167 GLN168 LEU169 SER170 VAL171 ALA172 GLY173 VAL174 SER175 CYS176 ASN177 VAL178 THR179 THR180 GLU181 HIS182 PRO183 PHE184 CYS185 ASN186 THR187 PRO188 HIS189 GLY190 GLN191 LEU192 GLU193 VAL194 GLN195 VAL196 PRO197 PRO198 ASP199 PRO200 GLY201 ASP202 LEU203 VAL204 GLU205 TYR206 ILE207 MET208 ASN209 TYR210 ASN213 GLN214 GLN215 SER216 ARG217 TRP218 GLY219 LEU220 GLY221 SER222 PRO223 ASN224 CYS225 HIS226 GLY227 PRO228 ASP229 TRP230 ALA231 SER232 PRO233 VAL234 CYS235 GLN236 ARG237 HIS238 SER239 PRO240 ASP241 CYS242 SER243 ARG244 LEU245 VAL246 GLY247 ALA248 THR249 PRO250 GLU251 ARG252 PRO253 ARG254 LEU255 ARG256 LEU257 VAL258 ASP259 ALA260 ASP261 ASP262 PRO263 LEU264 LEU265 ARG266 THR267 ALA268 PRO269 GLY270 PRO271 GLY272 GLU273 VAL274 TRP275 VAL276 THR277 PRO278 VAL279 ILE280 GLY281 SER282 GLN283 ALA284 ARG285 LYS286 CYS287 GLY288 LEU289 HIS290 ILE291 ARG292 ALA293 GLY294 PRO295 TYR296 GLY297 HIS298 ALA299 THR300 VAL301 GLU302 MET303 PRO304 GLU305 TRP306 ILE307 HIS308 ALA309 HIS310 THR311 THR312 SER313 ASP314 PRO315 TRP316 HIS317 PRO318 PRO319 GLY320 PRO321 LEU322 GLY323 LEU324 LYS325 PHE326 LYS327 THR328 VAL329 ARG330 PRO331 VAL332 ALA333 LEU334 PRO335 ARG336 ALA337 LEU338 ALA339 PRO340 PRO341 ARG342 ASN343 VAL344 ARG345 VAL346 THR347 GLY348 CYS349 TYR350 GLN351 CYS352 GLY353 THR354 PRO355 ALA356 LEU357 VAL358 GLU359 GLY360 LEU361 ALA362 PRO363 GLY364 GLY365 GLY366 ASN367 CYS368 HIS369 LEU370 THR371 VAL372 ASN373 GLY374 GLU375 ASP376 VAL377 GLY378 ALA379 PHE380 PRO381 PRO382 GLY383 LYS384 PHE385 VAL386 THR387 ALA388 ALA389 LEU390 LEU391 ASN392 THR393 PRO394 PRO395 PRO396 TYR397 GLN398 VAL399 SER400 CYS401 GLY402 GLY403 GLU404 SER405 ASP406 ARG407 ALA408 SER409 ALA410 ARG411 VAL412 ILE413 ASP414 PRO415 ALA416 ALA417 GLN418 SER419 PHE420 THR421 GLY422 VAL423 VAL424 TYR425 GLY426 THR427 HIS428 THR429 THR430 ALA431 VAL432 SER433 GLU434 THR435

Ligands
Unit 4 NAG1436 NGA1437 GOL1438 GOL1439 GOL1440 GOL1441 ACT1443 ACT1444 ACT1445 PG41447 PEG1449 NA1450 CA1451
Unit 5 NAG1436 GOL1437 GOL1438 GOL1439 GOL1440 GOL1441 GOL1442 ACT1443 ACT1444 CA1445 PEG1446
Unit 6 NAG1436 NAG1437 NGA1438 GOL1439 GOL1440 GOL1441 GOL1442 GOL1443 ACT1444 ACT1445 CA1446 PEG1447 PEG1448

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany