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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN EVOLVED REPLICATING DNA POLYMERASE
Keywords TRANSFERASE, B FAMILY POLYMERASE, APOENZYME
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4AHC     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA POLYMERASE  A 704 5786 0
2  Protein   DNA POLYMERASE  B 743 6077 0
3  Ligand   DNA POLYMERASE  A 2 0 12
4  Ligand   DNA POLYMERASE  B 2 0 12
5 Water     294 0 294
total       1745 11863 318
Proteins
Unit 1 MET1 ILE2 LEU3 ASP4 VAL5 ASP6 TYR7 ILE8 THR9 GLU10 GLU11 GLY12 LYS13 PRO14 VAL15 ILE16 ARG17 LEU18 PHE19 LYS20 LYS21 GLU22 ASN23 GLY24 LYS25 PHE26 LYS27 ILE28 GLU29 HIS30 ASP31 ARG32 THR33 PHE34 ARG35 PRO36 TYR37 ILE38 TYR39 ALA40 LEU41 LEU42 ARG43 ASP44 ASP45 SER46 LYS47 ILE48 GLU49 GLU50 VAL51 LYS52 LYS53 ILE54 THR55 GLY56 GLU57 ARG58 HIS59 GLY60 LYS61 ILE62 VAL63 ARG64 ILE65 VAL66 ASP67 VAL68 GLU69 LYS70 VAL71 GLU72 LYS73 LYS74 PHE75 LEU76 GLY77 LYS78 PRO79 ILE80 THR81 VAL82 TRP83 LYS84 LEU85 TYR86 LEU87 GLU88 HIS89 PRO90 GLN91 ASP92 GLN93 PRO94 THR95 ILE96 ARG97 GLU98 LYS99 VAL100 ARG101 GLU102 HIS103 PRO104 ALA105 VAL106 VAL107 ASP108 ILE109 PHE110 GLU111 TYR112 ASP113 ILE114 PRO115 PHE116 ALA117 LYS118 ARG119 TYR120 LEU121 ILE122 ASP123 LYS124 GLY125 LEU126 ILE127 PRO128 MET129 GLU130 GLY131 GLU132 GLU133 GLU134 LEU135 LYS136 ILE137 LEU138 ALA139 PHE140 ALA141 ILE142 ALA143 THR144 LEU145 TYR146 HIS147 GLU148 GLY149 GLU150 GLU151 PHE152 GLY153 LYS154 GLY155 PRO156 ILE157 ILE158 MET159 ILE160 SER161 TYR162 ALA163 ASP164 GLU165 ASN166 GLU167 ALA168 LYS169 VAL170 ILE171 THR172 TRP173 LYS174 ASN175 ILE176 ASP177 LEU178 PRO179 TYR180 VAL181 GLU182 VAL183 VAL184 SER185 SER186 GLU187 ARG188 GLU189 MET190 ILE191 LYS192 ARG193 PHE194 LEU195 ARG196 ILE197 ILE198 ARG199 GLU200 LYS201 ASP202 PRO203 ASP204 ILE205 ILE206 VAL207 THR208 TYR209 ASN210 GLY211 ASP212 SER213 PHE214 ASP215 PHE216 PRO217 TYR218 LEU219 ALA220 LYS221 ARG222 ALA223 GLU224 LYS225 LEU226 GLY227 ILE228 LYS229 LEU230 THR231 ILE232 GLY233 ARG234 ASP235 GLY236 SER237 GLU238 PRO239 LYS240 MET241 GLN242 ARG243 ILE244 GLY245 ASP246 MET247 THR248 ALA249 VAL250 GLU251 VAL252 LYS253 GLY254 ARG255 ILE256 HIS257 PHE258 ASP259 LEU260 TYR261 HIS262 VAL263 ILE264 THR265 ARG266 THR267 ILE268 ASN269 LEU270 PRO271 THR272 TYR273 THR274 LEU275 GLU276 ALA277 VAL278 TYR279 GLU280 ALA281 ILE282 PHE283 GLY284 LYS285 PRO286 LYS287 GLU288 LYS289 VAL290 TYR291 ALA292 ASP293 GLU294 ILE295 ALA296 LYS297 ALA298 TRP299 GLU300 SER301 GLY302 GLU303 ASN304 LEU305 GLU306 ARG307 VAL308 ALA309 LYS310 TYR311 SER312 MET313 GLU314 ASP315 ALA316 LYS317 ALA318 THR319 TYR320 GLU321 LEU322 GLY323 LYS324 GLU325 PHE326 LEU327 PRO328 MET329 GLU330 ILE331 GLN332 LEU333 SER334 ARG335 LEU336 ILE337 GLY338 GLN339 PRO340 LEU341 TRP342 ASP343 VAL344 SER345 ARG346 SER347 SER348 THR349 GLY350 ASN351 LEU352 VAL353 GLU354 TRP355 PHE356 LEU357 LEU358 ARG359 LYS360 ALA361 TYR362 GLU363 ARG364 ASN365 GLU366 VAL367 ALA368 PRO369 ASN370 LYS371 PRO372 SER373 GLU374 GLU375 GLU376 TYR377 GLN378 ARG379 ARG380 LEU381 ARG382 GLU383 SER384 TYR385 THR386 GLY387 GLY388 PHE389 VAL390 LYS391 GLU392 PRO393 GLU394 LYS395 GLY396 LEU397 TRP398 ASP399 ASP400 ILE401 VAL402 TYR403 LEU404 ASP405 PHE406 ILE407 ALA408 LEU409 TYR410 PRO411 SER412 ILE413 ILE414 ILE415 THR416 HIS417 ASN418 VAL419 SER420 PRO421 ASP422 THR423 LEU424 ASN425 LEU426 GLU427 GLY428 CYS429 LYS430 ASN431 TYR432 ASP433 ILE434 ALA435 PRO436 GLN437 VAL438 GLY439 HIS440 LYS441 PHE442 CYS443 LYS444 ASP445 ILE446 PRO447 GLY448 PHE449 ILE450 PRO451 SER452 LEU453 LEU454 GLY455 HIS456 LEU457 LEU458 GLU459 GLU460 ARG461 GLN462 LYS463 ILE464 LYS465 THR466 LYS467 MET468 LYS469 GLU470 THR471 GLN472 ASP473 PRO474 ILE475 GLU476 LYS477 ILE478 LEU479 LEU480 ASP481 TYR482 ARG483 GLN484 LYS485 ALA486 ILE487 LYS488 LEU489 LEU490 ALA491 ASN492 SER493 PHE494 TYR495 GLY496 TYR497 TYR498 GLY499 TYR500 ALA501 LYS502 ALA503 ARG504 TRP505 TYR506 CYS507 LYS508 GLU509 CYS510 ALA511 GLU512 SER513 VAL514 THR515 ALA516 TRP517 GLY518 ARG519 LYS520 TYR521 ILE522 GLU523 LEU524 VAL525 TRP526 LYS527 GLU528 LEU529 GLU530 GLU531 LYS532 PHE533 GLY534 PHE535 LYS536 VAL537 LEU538 TYR539 ILE540 ASP541 THR542 ASP543 GLY544 LEU545 HIS546 ALA547 THR548 ILE549 PRO550 GLY551 GLY552 GLU553 SER554 GLU555 GLU556 ILE557 LYS558 LYS559 LYS560 ALA561 LEU562 GLU563 PHE564 VAL565 LYS566 TYR567 ILE568 ASN569 SER570 LYS571 LEU572 PRO573 GLY574 LEU575 LEU576 GLU577 LEU578 GLU579 TYR580 GLU581 GLY582 PHE583 TYR584 LYS585 ARG586 GLY587 PHE588 PHE589 VAL590 THR591 LYS592 LYS593 ARG594 TYR595 ALA596 VAL597 ILE598 ASP599 GLU600 GLU601 GLY602 LYS603 VAL604 ILE605 THR606 ARG607 GLY608 LEU609 GLU610 ILE611 ILE619 ALA620 LYS621 GLU622 THR623 GLN624 ALA625 ARG626 VAL627 LEU628 GLU629 THR630 ILE631 LEU632 LYS633 HIS634 GLY635 ASP636 VAL637 GLU638 GLU639 ALA640 VAL641 ARG642 ILE643 VAL644 LYS645 GLU646 VAL647 ILE648 GLN649 LYS650 LEU651 ALA652 ASN653 TYR654 GLU655 ILE656 PRO657 PRO658 GLU659 LYS660 LEU661 ALA662 ILE663 TYR664 GLU665 ILE677 GLY678 PRO679 HIS680 VAL681 ALA682 VAL683 ALA684 LYS685 LYS686 LEU687 ALA688 LYS724 LYS725 HIS726 LYS727 TYR728 ASP729 ALA730 GLU731 TYR732 TYR733 ILE734 GLU735 ASN736 GLN737 VAL738 LEU739 PRO740 ALA741 VAL742 LEU743 ARG744 ILE745 LEU746 GLU747 GLY748 PHE749 GLY750 TYR751 ARG752 LYS753 GLU754 ASP755 LEU756 ARG757
Unit 2 MET1 ILE2 LEU3 ASP4 VAL5 ASP6 TYR7 ILE8 THR9 GLU10 GLU11 GLY12 LYS13 PRO14 VAL15 ILE16 ARG17 LEU18 PHE19 LYS20 LYS21 GLU22 ASN23 GLY24 LYS25 PHE26 LYS27 ILE28 GLU29 HIS30 ASP31 ARG32 THR33 PHE34 ARG35 PRO36 TYR37 ILE38 TYR39 ALA40 LEU41 LEU42 ARG43 ASP44 ASP45 SER46 LYS47 ILE48 GLU49 GLU50 VAL51 LYS52 LYS53 ILE54 THR55 GLY56 GLU57 ARG58 HIS59 GLY60 LYS61 ILE62 VAL63 ARG64 ILE65 VAL66 ASP67 VAL68 GLU69 LYS70 VAL71 GLU72 LYS73 LYS74 PHE75 LEU76 GLY77 LYS78 PRO79 ILE80 THR81 VAL82 TRP83 LYS84 LEU85 TYR86 LEU87 GLU88 HIS89 PRO90 GLN91 ASP92 GLN93 PRO94 THR95 ILE96 ARG97 GLU98 LYS99 VAL100 ARG101 GLU102 HIS103 PRO104 ALA105 VAL106 VAL107 ASP108 ILE109 PHE110 GLU111 TYR112 ASP113 ILE114 PRO115 PHE116 ALA117 LYS118 ARG119 TYR120 LEU121 ILE122 ASP123 LYS124 GLY125 LEU126 ILE127 PRO128 MET129 GLU130 GLY131 GLU132 GLU133 GLU134 LEU135 LYS136 ILE137 LEU138 ALA139 PHE140 ALA141 ILE142 ALA143 THR144 LEU145 TYR146 HIS147 GLU148 GLY149 GLU150 GLU151 PHE152 GLY153 LYS154 GLY155 PRO156 ILE157 ILE158 MET159 ILE160 SER161 TYR162 ALA163 ASP164 GLU165 ASN166 GLU167 ALA168 LYS169 VAL170 ILE171 THR172 TRP173 LYS174 ASN175 ILE176 ASP177 LEU178 PRO179 TYR180 VAL181 GLU182 VAL183 VAL184 SER185 SER186 GLU187 ARG188 GLU189 MET190 ILE191 LYS192 ARG193 PHE194 LEU195 ARG196 ILE197 ILE198 ARG199 GLU200 LYS201 ASP202 PRO203 ASP204 ILE205 ILE206 VAL207 THR208 TYR209 ASN210 GLY211 ASP212 SER213 PHE214 ASP215 PHE216 PRO217 TYR218 LEU219 ALA220 LYS221 ARG222 ALA223 GLU224 LYS225 LEU226 GLY227 ILE228 LYS229 LEU230 THR231 ILE232 GLY233 ARG234 ASP235 GLY236 SER237 GLU238 PRO239 LYS240 MET241 GLN242 ARG243 ILE244 GLY245 ASP246 MET247 THR248 ALA249 VAL250 GLU251 VAL252 LYS253 GLY254 ARG255 ILE256 HIS257 PHE258 ASP259 LEU260 TYR261 HIS262 VAL263 ILE264 THR265 ARG266 THR267 ILE268 ASN269 LEU270 PRO271 THR272 TYR273 THR274 LEU275 GLU276 ALA277 VAL278 TYR279 GLU280 ALA281 ILE282 PHE283 GLY284 LYS285 PRO286 LYS287 GLU288 LYS289 VAL290 TYR291 ALA292 ASP293 GLU294 ILE295 ALA296 LYS297 ALA298 TRP299 GLU300 SER301 GLY302 GLU303 ASN304 LEU305 GLU306 ARG307 VAL308 ALA309 LYS310 TYR311 SER312 MET313 GLU314 ASP315 ALA316 LYS317 ALA318 THR319 TYR320 GLU321 LEU322 GLY323 LYS324 GLU325 PHE326 LEU327 PRO328 MET329 GLU330 ILE331 GLN332 LEU333 SER334 ARG335 LEU336 ILE337 GLY338 GLN339 PRO340 LEU341 TRP342 ASP343 VAL344 SER345 ARG346 SER347 SER348 THR349 GLY350 ASN351 LEU352 VAL353 GLU354 TRP355 PHE356 LEU357 LEU358 ARG359 LYS360 ALA361 TYR362 GLU363 ARG364 ASN365 GLU366 VAL367 ALA368 PRO369 ASN370 LYS371 PRO372 SER373 GLU374 GLU375 GLU376 TYR377 GLN378 ARG379 ARG380 LEU381 ARG382 GLU383 SER384 TYR385 THR386 GLY387 GLY388 PHE389 VAL390 LYS391 GLU392 PRO393 GLU394 LYS395 GLY396 LEU397 TRP398 ASP399 ASP400 ILE401 VAL402 TYR403 LEU404 ASP405 PHE406 ILE407 ALA408 LEU409 TYR410 PRO411 SER412 ILE413 ILE414 ILE415 THR416 HIS417 ASN418 VAL419 SER420 PRO421 ASP422 THR423 LEU424 ASN425 LEU426 GLU427 GLY428 CYS429 LYS430 ASN431 TYR432 ASP433 ILE434 ALA435 PRO436 GLN437 VAL438 GLY439 HIS440 LYS441 PHE442 CYS443 LYS444 ASP445 ILE446 PRO447 GLY448 PHE449 ILE450 PRO451 SER452 LEU453 LEU454 GLY455 HIS456 LEU457 LEU458 GLU459 GLU460 ARG461 GLN462 LYS463 ILE464 LYS465 THR466 LYS467 MET468 LYS469 GLU470 THR471 GLN472 ASP473 PRO474 ILE475 GLU476 LYS477 ILE478 LEU479 LEU480 ASP481 TYR482 ARG483 GLN484 LYS485 ALA486 ILE487 LYS488 LEU489 LEU490 ALA491 ASN492 SER493 PHE494 TYR495 GLY496 TYR497 TYR498 GLY499 TYR500 ALA501 LYS502 ALA503 ARG504 TRP505 TYR506 CYS507 LYS508 GLU509 CYS510 ALA511 GLU512 SER513 VAL514 THR515 ALA516 TRP517 GLY518 ARG519 LYS520 TYR521 ILE522 GLU523 LEU524 VAL525 TRP526 LYS527 GLU528 LEU529 GLU530 GLU531 LYS532 PHE533 GLY534 PHE535 LYS536 VAL537 LEU538 TYR539 ILE540 ASP541 THR542 ASP543 GLY544 LEU545 HIS546 ALA547 THR548 ILE549 PRO550 GLY551 GLY552 GLU553 SER554 GLU555 GLU556 ILE557 LYS558 LYS559 LYS560 ALA561 LEU562 GLU563 PHE564 VAL565 LYS566 TYR567 ILE568 ASN569 SER570 LYS571 LEU572 PRO573 GLY574 LEU575 LEU576 GLU577 LEU578 GLU579 TYR580 GLU581 GLY582 PHE583 TYR584 LYS585 ARG586 GLY587 PHE588 PHE589 VAL590 THR591 LYS592 LYS593 ARG594 TYR595 ALA596 VAL597 ILE598 ASP599 GLU600 GLU601 GLY602 LYS603 VAL604 ILE605 THR606 ARG607 GLY608 LEU609 GLU610 ILE611 ASP615 TRP616 SER617 GLU618 ILE619 ALA620 LYS621 GLU622 THR623 GLN624 ALA625 ARG626 VAL627 LEU628 GLU629 THR630 ILE631 LEU632 LYS633 HIS634 GLY635 ASP636 VAL637 GLU638 GLU639 ALA640 VAL641 ARG642 ILE643 VAL644 LYS645 GLU646 VAL647 ILE648 GLN649 LYS650 LEU651 ALA652 ASN653 TYR654 GLU655 ILE656 PRO657 PRO658 GLU659 LYS660 LEU661 ALA662 ILE663 TYR664 GLU665 GLN666 ILE667 THR668 ALA676 ILE677 GLY678 PRO679 HIS680 VAL681 ALA682 VAL683 ALA684 LYS685 LYS686 LEU687 ALA688 ALA689 LYS690 GLY691 VAL692 PRO696 GLY697 MET698 VAL699 ILE700 GLY701 TYR702 ILE703 VAL704 LEU705 ARG706 GLY707 ASP708 GLY709 PRO710 ILE711 SER712 ASN713 ARG714 ALA715 ILE716 LEU717 ALA718 GLU719 GLU720 TYR721 ASP722 PRO723 LYS724 LYS725 HIS726 LYS727 TYR728 ASP729 ALA730 GLU731 TYR732 TYR733 ILE734 GLU735 ASN736 GLN737 VAL738 LEU739 PRO740 ALA741 VAL742 LEU743 ARG744 ILE745 LEU746 GLU747 GLY748 PHE749 GLY750 TYR751 ARG752 LYS753 GLU754 ASP755 LEU756
Ligands
Unit 3 GOL800 GOL801
Unit 4 GOL800 GOL801
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany