Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR SELB FROM METHANOCOCCUS MARIPALUDIS, APO FORM
Keywords SELENOCYSTEINE, TRANSLATION, SECIS ELEMENT, EF-SEC, SEC-TRNA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4ACA     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSLATION ELONGATION FACTOR SELB  A 448 3443 32
2  Protein   TRANSLATION ELONGATION FACTOR SELB  B 456 3501 32
3  Protein   TRANSLATION ELONGATION FACTOR SELB  C 471 3619 32
4  Protein   TRANSLATION ELONGATION FACTOR SELB  D 467 3583 32
5  Ligand   TRANSLATION ELONGATION FACTOR SELB  B 4 0 62
6  Ligand   TRANSLATION ELONGATION FACTOR SELB  C 11 0 193
total       1857 14146 383
Proteins
Unit 1 HIS0 MET1 ASP2 PHE3 LYS4 ASN5 ILE6 ASN7 LEU8 GLY9 ILE10 PHE11 GLY12 HIS13 ILE14 ASP15 HIS16 GLY17 LYS18 THR19 THR20 LEU21 SER22 LYS23 VAL24 LEU25 THR26 GLU27 ILE28 GLY50 PHE51 SER52 ALA53 PHE54 LYS55 LEU56 GLU57 ASN58 TYR59 ARG60 ILE61 THR62 LEU63 VAL64 ASP65 ALA66 PRO67 GLY68 HIS69 ALA70 ASP71 LEU72 ILE73 ARG74 ALA75 VAL76 VAL77 SER78 ALA79 ALA80 ASP81 ILE82 ILE83 ASP84 LEU85 ALA86 LEU87 ILE88 VAL89 VAL90 ASP91 ALA92 LYS93 GLU94 GLY95 PRO96 LYS97 THR98 GLN99 THR100 GLY101 GLU102 HIS103 MET104 LEU105 ILE106 LEU107 ASP108 HIS109 PHE110 ASN111 ILE112 PRO113 ILE114 ILE115 VAL116 VAL117 ILE118 THR119 LYS120 SER121 ASP122 ASN123 ALA124 GLY125 THR126 GLU127 GLU128 ILE129 LYS130 ARG131 THR132 GLU133 MET134 ILE135 MET136 LYS137 SER138 ILE139 LEU140 GLN141 SER142 THR143 HIS144 ASN145 LEU146 LYS147 ASN148 SER149 SER150 ILE151 ILE152 PRO153 ILE154 SER155 ALA156 LYS157 THR158 GLY159 PHE160 GLY161 VAL162 ASP163 GLU164 LEU165 LYS166 ASN167 LEU168 ILE169 ILE170 THR171 THR172 LEU173 ASN174 ASN175 ALA176 GLU177 ILE178 ILE179 ARG180 ASN181 THR182 GLU183 SER184 TYR185 PHE186 LYS187 MET188 PRO189 LEU190 ASP191 HIS192 ALA193 PHE194 PRO195 ILE196 LYS197 GLY198 ALA199 GLY200 THR201 VAL202 VAL203 THR204 GLY205 THR206 ILE207 ASN208 LYS209 GLY210 ILE211 VAL212 LYS213 VAL214 GLY215 ASP216 GLU217 LEU218 LYS219 VAL220 LEU221 PRO222 ILE223 ASN224 MET225 SER226 THR227 LYS228 VAL229 ARG230 SER231 ILE232 GLN233 TYR234 PHE235 LYS236 GLU237 SER238 VAL239 MET240 GLU241 ALA242 LYS243 ALA244 GLY245 ASP246 ARG247 VAL248 GLY249 MET250 ALA251 ILE252 GLN253 GLY254 VAL255 ASP256 ALA257 LYS258 GLN259 ILE260 TYR261 ARG262 GLY263 CMH264 ILE265 LEU266 THR267 SER268 LYS269 ASP270 THR271 LYS272 LEU273 GLN274 THR275 VAL276 ASP277 LYS278 ILE279 VAL280 ALA281 LYS282 ILE283 LYS284 ILE285 SER286 ASP287 ILE288 PHE289 LYS290 TYR291 ASN292 LEU293 THR294 PRO295 LYS296 MET297 LYS298 VAL299 HIS300 LEU301 ASN302 VAL303 GLY304 MET305 LEU306 ILE307 VAL308 PRO309 ALA310 VAL311 ALA312 VAL313 PRO314 PHE315 LYS316 LYS317 VAL318 THR319 PHE320 GLY321 LYS322 THR323 GLU324 GLU325 ASN326 ILE327 ILE328 LEU329 ASN330 GLU331 VAL332 ILE333 SER334 GLY335 ASN336 GLU337 CMH338 TYR339 CMH340 ALA341 PHE342 GLU343 LEU344 GLU345 GLU346 LYS347 VAL348 LEU349 ALA350 GLU351 VAL352 GLY353 ASP354 ARG355 VAL356 LEU357 ILE358 THR359 ARG360 LEU361 ASP362 LEU363 PRO364 PRO365 THR366 THR367 LEU368 ARG369 ILE370 CMH371 GLY372 HIS373 GLY374 LEU375 ILE376 GLU377 GLU378 PHE379 LYS380 PRO381 ILE382 LYS383 ASP384 LEU385 ASN386 ILE387 LYS388 LYS389 GLU390 VAL391 LEU392 ARG393 GLU394 GLY395 LYS396 VAL397 LYS398 ILE399 ASP400 LYS401 GLY402 ARG403 THR404 VAL405 ILE406 ASP407 GLY408 LEU409 ALA410 GLN411 SER412 LYS413 VAL414 ALA415 ALA416 GLU417 LYS418 LEU419 ILE420 GLY421 GLU422 GLU423 ILE424 SER425 ILE426 GLU427 GLY428 LYS429 ASP430 ILE431 VAL432 GLY433 LYS434 ILE435 LYS436 GLY437 THR438 PHE439 GLY440 THR441 LYS442 GLY443 LEU444 LEU445 THR446 ALA447 GLU448 PHE449 SER450 GLY451 ASN452 VAL453 GLU454 ASN455 ARG456 ASP457 LYS458 VAL459 ILE460 LEU461 ASN462 ARG463 LEU464 ARG465 ARG466 TRP467 GLY468
Unit 2 MET1 ASP2 PHE3 LYS4 ASN5 ILE6 ASN7 LEU8 GLY9 ILE10 PHE11 GLY12 HIS13 ILE14 ASP15 HIS16 GLY17 LYS18 THR19 THR20 LEU21 SER22 LYS23 VAL24 LEU25 THR26 GLU27 ILE28 ALA29 LYS42 ARG43 GLY44 ILE45 THR46 ILE47 ASP48 ILE49 GLY50 PHE51 SER52 ALA53 PHE54 LYS55 LEU56 GLU57 ASN58 TYR59 ARG60 ILE61 THR62 LEU63 VAL64 ASP65 ALA66 PRO67 GLY68 HIS69 ALA70 ASP71 LEU72 ILE73 ARG74 ALA75 VAL76 VAL77 SER78 ALA79 ALA80 ASP81 ILE82 ILE83 ASP84 LEU85 ALA86 LEU87 ILE88 VAL89 VAL90 ASP91 ALA92 LYS93 GLU94 GLY95 PRO96 LYS97 THR98 GLN99 THR100 GLY101 GLU102 HIS103 MET104 LEU105 ILE106 LEU107 ASP108 HIS109 PHE110 ASN111 ILE112 PRO113 ILE114 ILE115 VAL116 VAL117 ILE118 THR119 LYS120 SER121 ASP122 ASN123 ALA124 GLY125 THR126 GLU127 GLU128 ILE129 LYS130 ARG131 THR132 GLU133 MET134 ILE135 MET136 LYS137 SER138 ILE139 LEU140 GLN141 SER142 THR143 HIS144 ASN145 LEU146 LYS147 ASN148 SER149 SER150 ILE151 ILE152 PRO153 ILE154 SER155 ALA156 LYS157 THR158 GLY159 PHE160 GLY161 VAL162 ASP163 GLU164 LEU165 LYS166 ASN167 LEU168 ILE169 ILE170 THR171 THR172 LEU173 ASN174 ASN175 ALA176 GLU177 ILE178 ILE179 ARG180 ASN181 THR182 GLU183 SER184 TYR185 PHE186 LYS187 MET188 PRO189 LEU190 ASP191 HIS192 ALA193 PHE194 PRO195 ILE196 LYS197 GLY198 ALA199 GLY200 THR201 VAL202 VAL203 THR204 GLY205 THR206 ILE207 ASN208 LYS209 GLY210 ILE211 VAL212 LYS213 VAL214 GLY215 ASP216 GLU217 LEU218 LYS219 VAL220 LEU221 PRO222 ILE223 ASN224 MET225 SER226 THR227 LYS228 VAL229 ARG230 SER231 ILE232 GLN233 TYR234 PHE235 LYS236 GLU237 SER238 VAL239 MET240 GLU241 ALA242 LYS243 ALA244 GLY245 ASP246 ARG247 VAL248 GLY249 MET250 ALA251 ILE252 GLN253 GLY254 VAL255 ASP256 ALA257 LYS258 GLN259 ILE260 TYR261 ARG262 GLY263 CMH264 ILE265 LEU266 THR267 SER268 LYS269 ASP270 THR271 LYS272 LEU273 GLN274 THR275 VAL276 ASP277 LYS278 ILE279 VAL280 ALA281 LYS282 ILE283 LYS284 ILE285 SER286 ASP287 ILE288 PHE289 LYS290 TYR291 ASN292 LEU293 THR294 PRO295 LYS296 MET297 LYS298 VAL299 HIS300 LEU301 ASN302 VAL303 GLY304 MET305 LEU306 ILE307 VAL308 PRO309 ALA310 VAL311 ALA312 VAL313 PRO314 PHE315 LYS316 LYS317 VAL318 THR319 PHE320 GLY321 LYS322 THR323 GLU324 GLU325 ASN326 ILE327 ILE328 LEU329 ASN330 GLU331 VAL332 ILE333 SER334 GLY335 ASN336 GLU337 CMH338 TYR339 CMH340 ALA341 PHE342 GLU343 LEU344 GLU345 GLU346 LYS347 VAL348 LEU349 ALA350 GLU351 VAL352 GLY353 ASP354 ARG355 VAL356 LEU357 ILE358 THR359 ARG360 LEU361 ASP362 LEU363 PRO364 PRO365 THR366 THR367 LEU368 ARG369 ILE370 CMH371 GLY372 HIS373 GLY374 LEU375 ILE376 GLU377 GLU378 PHE379 LYS380 PRO381 ILE382 LYS383 ASP384 LEU385 ASN386 ILE387 LYS388 LYS389 GLU390 VAL391 LEU392 ARG393 GLU394 GLY395 LYS396 VAL397 LYS398 ILE399 ASP400 LYS401 GLY402 ARG403 THR404 VAL405 ILE406 ASP407 GLY408 LEU409 ALA410 GLN411 SER412 LYS413 VAL414 ALA415 ALA416 GLU417 LYS418 LEU419 ILE420 GLY421 GLU422 GLU423 ILE424 SER425 ILE426 GLU427 GLY428 LYS429 ASP430 ILE431 VAL432 GLY433 LYS434 ILE435 LYS436 GLY437 THR438 PHE439 GLY440 THR441 LYS442 GLY443 LEU444 LEU445 THR446 ALA447 GLU448 PHE449 SER450 GLY451 ASN452 VAL453 GLU454 ASN455 ARG456 ASP457 LYS458 VAL459 ILE460 LEU461 ASN462 ARG463 LEU464 ARG465 ARG466 TRP467 GLY468
Unit 3 ARG-2 PRO-1 HIS0 MET1 ASP2 PHE3 LYS4 ASN5 ILE6 ASN7 LEU8 GLY9 ILE10 PHE11 GLY12 HIS13 ILE14 ASP15 HIS16 GLY17 LYS18 THR19 THR20 LEU21 SER22 LYS23 VAL24 LEU25 THR26 GLU27 ILE28 ALA29 SER30 THR31 SER32 ALA33 HIS34 ASP35 LYS36 LEU37 PRO38 GLU39 SER40 GLN41 LYS42 ARG43 GLY44 ILE45 THR46 ILE47 ASP48 ILE49 GLY50 PHE51 SER52 ALA53 PHE54 LYS55 LEU56 GLU57 ASN58 TYR59 ARG60 ILE61 THR62 LEU63 VAL64 ASP65 ALA66 PRO67 GLY68 HIS69 ALA70 ASP71 LEU72 ILE73 ARG74 ALA75 VAL76 VAL77 SER78 ALA79 ALA80 ASP81 ILE82 ILE83 ASP84 LEU85 ALA86 LEU87 ILE88 VAL89 VAL90 ASP91 ALA92 LYS93 GLU94 GLY95 PRO96 LYS97 THR98 GLN99 THR100 GLY101 GLU102 HIS103 MET104 LEU105 ILE106 LEU107 ASP108 HIS109 PHE110 ASN111 ILE112 PRO113 ILE114 ILE115 VAL116 VAL117 ILE118 THR119 LYS120 SER121 ASP122 ASN123 ALA124 GLY125 THR126 GLU127 GLU128 ILE129 LYS130 ARG131 THR132 GLU133 MET134 ILE135 MET136 LYS137 SER138 ILE139 LEU140 GLN141 SER142 THR143 HIS144 ASN145 LEU146 LYS147 ASN148 SER149 SER150 ILE151 ILE152 PRO153 ILE154 SER155 ALA156 LYS157 THR158 GLY159 PHE160 GLY161 VAL162 ASP163 GLU164 LEU165 LYS166 ASN167 LEU168 ILE169 ILE170 THR171 THR172 LEU173 ASN174 ASN175 ALA176 GLU177 ILE178 ILE179 ARG180 ASN181 THR182 GLU183 SER184 TYR185 PHE186 LYS187 MET188 PRO189 LEU190 ASP191 HIS192 ALA193 PHE194 PRO195 ILE196 LYS197 GLY198 ALA199 GLY200 THR201 VAL202 VAL203 THR204 GLY205 THR206 ILE207 ASN208 LYS209 GLY210 ILE211 VAL212 LYS213 VAL214 GLY215 ASP216 GLU217 LEU218 LYS219 VAL220 LEU221 PRO222 ILE223 ASN224 MET225 SER226 THR227 LYS228 VAL229 ARG230 SER231 ILE232 GLN233 TYR234 PHE235 LYS236 GLU237 SER238 VAL239 MET240 GLU241 ALA242 LYS243 ALA244 GLY245 ASP246 ARG247 VAL248 GLY249 MET250 ALA251 ILE252 GLN253 GLY254 VAL255 ASP256 ALA257 LYS258 GLN259 ILE260 TYR261 ARG262 GLY263 CMH264 ILE265 LEU266 THR267 SER268 LYS269 ASP270 THR271 LYS272 LEU273 GLN274 THR275 VAL276 ASP277 LYS278 ILE279 VAL280 ALA281 LYS282 ILE283 LYS284 ILE285 SER286 ASP287 ILE288 PHE289 LYS290 TYR291 ASN292 LEU293 THR294 PRO295 LYS296 MET297 LYS298 VAL299 HIS300 LEU301 ASN302 VAL303 GLY304 MET305 LEU306 ILE307 VAL308 PRO309 ALA310 VAL311 ALA312 VAL313 PRO314 PHE315 LYS316 LYS317 VAL318 THR319 PHE320 GLY321 LYS322 THR323 GLU324 GLU325 ASN326 ILE327 ILE328 LEU329 ASN330 GLU331 VAL332 ILE333 SER334 GLY335 ASN336 GLU337 CMH338 TYR339 CMH340 ALA341 PHE342 GLU343 LEU344 GLU345 GLU346 LYS347 VAL348 LEU349 ALA350 GLU351 VAL352 GLY353 ASP354 ARG355 VAL356 LEU357 ILE358 THR359 ARG360 LEU361 ASP362 LEU363 PRO364 PRO365 THR366 THR367 LEU368 ARG369 ILE370 CMH371 GLY372 HIS373 GLY374 LEU375 ILE376 GLU377 GLU378 PHE379 LYS380 PRO381 ILE382 LYS383 ASP384 LEU385 ASN386 ILE387 LYS388 LYS389 GLU390 VAL391 LEU392 ARG393 GLU394 GLY395 LYS396 VAL397 LYS398 ILE399 ASP400 LYS401 GLY402 ARG403 THR404 VAL405 ILE406 ASP407 GLY408 LEU409 ALA410 GLN411 SER412 LYS413 VAL414 ALA415 ALA416 GLU417 LYS418 LEU419 ILE420 GLY421 GLU422 GLU423 ILE424 SER425 ILE426 GLU427 GLY428 LYS429 ASP430 ILE431 VAL432 GLY433 LYS434 ILE435 LYS436 GLY437 THR438 PHE439 GLY440 THR441 LYS442 GLY443 LEU444 LEU445 THR446 ALA447 GLU448 PHE449 SER450 GLY451 ASN452 VAL453 GLU454 ASN455 ARG456 ASP457 LYS458 VAL459 ILE460 LEU461 ASN462 ARG463 LEU464 ARG465 ARG466 TRP467 GLY468
Unit 4 ASP2 PHE3 LYS4 ASN5 ILE6 ASN7 LEU8 GLY9 ILE10 PHE11 GLY12 HIS13 ILE14 ASP15 HIS16 GLY17 LYS18 THR19 THR20 LEU21 SER22 LYS23 VAL24 LEU25 THR26 GLU27 ILE28 ALA29 SER30 THR31 SER32 ALA33 HIS34 ASP35 LYS36 LEU37 PRO38 GLU39 SER40 GLN41 LYS42 ARG43 GLY44 ILE45 THR46 ILE47 ASP48 ILE49 GLY50 PHE51 SER52 ALA53 PHE54 LYS55 LEU56 GLU57 ASN58 TYR59 ARG60 ILE61 THR62 LEU63 VAL64 ASP65 ALA66 PRO67 GLY68 HIS69 ALA70 ASP71 LEU72 ILE73 ARG74 ALA75 VAL76 VAL77 SER78 ALA79 ALA80 ASP81 ILE82 ILE83 ASP84 LEU85 ALA86 LEU87 ILE88 VAL89 VAL90 ASP91 ALA92 LYS93 GLU94 GLY95 PRO96 LYS97 THR98 GLN99 THR100 GLY101 GLU102 HIS103 MET104 LEU105 ILE106 LEU107 ASP108 HIS109 PHE110 ASN111 ILE112 PRO113 ILE114 ILE115 VAL116 VAL117 ILE118 THR119 LYS120 SER121 ASP122 ASN123 ALA124 GLY125 THR126 GLU127 GLU128 ILE129 LYS130 ARG131 THR132 GLU133 MET134 ILE135 MET136 LYS137 SER138 ILE139 LEU140 GLN141 SER142 THR143 HIS144 ASN145 LEU146 LYS147 ASN148 SER149 SER150 ILE151 ILE152 PRO153 ILE154 SER155 ALA156 LYS157 THR158 GLY159 PHE160 GLY161 VAL162 ASP163 GLU164 LEU165 LYS166 ASN167 LEU168 ILE169 ILE170 THR171 THR172 LEU173 ASN174 ASN175 ALA176 GLU177 ILE178 ILE179 ARG180 ASN181 THR182 GLU183 SER184 TYR185 PHE186 LYS187 MET188 PRO189 LEU190 ASP191 HIS192 ALA193 PHE194 PRO195 ILE196 LYS197 GLY198 ALA199 GLY200 THR201 VAL202 VAL203 THR204 GLY205 THR206 ILE207 ASN208 LYS209 GLY210 ILE211 VAL212 LYS213 VAL214 GLY215 ASP216 GLU217 LEU218 LYS219 VAL220 LEU221 PRO222 ILE223 ASN224 MET225 SER226 THR227 LYS228 VAL229 ARG230 SER231 ILE232 GLN233 TYR234 PHE235 LYS236 GLU237 SER238 VAL239 MET240 GLU241 ALA242 LYS243 ALA244 GLY245 ASP246 ARG247 VAL248 GLY249 MET250 ALA251 ILE252 GLN253 GLY254 VAL255 ASP256 ALA257 LYS258 GLN259 ILE260 TYR261 ARG262 GLY263 CMH264 ILE265 LEU266 THR267 SER268 LYS269 ASP270 THR271 LYS272 LEU273 GLN274 THR275 VAL276 ASP277 LYS278 ILE279 VAL280 ALA281 LYS282 ILE283 LYS284 ILE285 SER286 ASP287 ILE288 PHE289 LYS290 TYR291 ASN292 LEU293 THR294 PRO295 LYS296 MET297 LYS298 VAL299 HIS300 LEU301 ASN302 VAL303 GLY304 MET305 LEU306 ILE307 VAL308 PRO309 ALA310 VAL311 ALA312 VAL313 PRO314 PHE315 LYS316 LYS317 VAL318 THR319 PHE320 GLY321 LYS322 THR323 GLU324 GLU325 ASN326 ILE327 ILE328 LEU329 ASN330 GLU331 VAL332 ILE333 SER334 GLY335 ASN336 GLU337 CMH338 TYR339 CMH340 ALA341 PHE342 GLU343 LEU344 GLU345 GLU346 LYS347 VAL348 LEU349 ALA350 GLU351 VAL352 GLY353 ASP354 ARG355 VAL356 LEU357 ILE358 THR359 ARG360 LEU361 ASP362 LEU363 PRO364 PRO365 THR366 THR367 LEU368 ARG369 ILE370 CMH371 GLY372 HIS373 GLY374 LEU375 ILE376 GLU377 GLU378 PHE379 LYS380 PRO381 ILE382 LYS383 ASP384 LEU385 ASN386 ILE387 LYS388 LYS389 GLU390 VAL391 LEU392 ARG393 GLU394 GLY395 LYS396 VAL397 LYS398 ILE399 ASP400 LYS401 GLY402 ARG403 THR404 VAL405 ILE406 ASP407 GLY408 LEU409 ALA410 GLN411 SER412 LYS413 VAL414 ALA415 ALA416 GLU417 LYS418 LEU419 ILE420 GLY421 GLU422 GLU423 ILE424 SER425 ILE426 GLU427 GLY428 LYS429 ASP430 ILE431 VAL432 GLY433 LYS434 ILE435 LYS436 GLY437 THR438 PHE439 GLY440 THR441 LYS442 GLY443 LEU444 LEU445 THR446 ALA447 GLU448 PHE449 SER450 GLY451 ASN452 VAL453 GLU454 ASN455 ARG456 ASP457 LYS458 VAL459 ILE460 LEU461 ASN462 ARG463 LEU464 ARG465 ARG466 TRP467 GLY468
Ligands
Unit 5 SO41471 SO41472 DXC1473 5GP1474
Unit 6 SO41471 SO41472 SO41473 SO41474 DXC1475 DXC1476 DXC1477 DXC1478 DXC1479 DXC1480 SO41481
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany