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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TYPE IIF RESTRICTION ENDONUCLEASE NGOMI COGNATE UNCLEAVED DNA
Keywords HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4ABT     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TYPE-2 RESTRICTION ENZYME NGOMIV  A 286 2238 0
2  Protein   TYPE-2 RESTRICTION ENZYME NGOMIV  B 286 2238 0
3  Other macromolecule   5'-D(*TP*GP*CP*GP*CP*CP*GP*GP*CP*GP*CP)-3'  E 11 222 0
4  Other macromolecule   5'-D(*TP*GP*CP*GP*CP*CP*GP*GP*CP*GP*CP)-3'  G 11 222 0
5  Ligand   TYPE-2 RESTRICTION ENZYME NGOMIV  A 1 0 1
6  Ligand   TYPE-2 RESTRICTION ENZYME NGOMIV  B 1 0 1
7  Ligand   5'-D(*TP*GP*CP*GP*CP*CP*GP*GP*CP*GP*CP)-3'  E 1 0 1
8 Water     246 0 246
total       843 4920 249

Proteins
Unit 1 MET1 GLN2 PRO3 LEU4 PHE5 THR6 GLN7 GLU8 ARG9 ARG10 ILE11 PHE12 HIS13 LYS14 LYS15 LEU16 LEU17 ASP18 GLY19 ASN20 ILE21 LEU22 ALA23 THR24 ASN25 ASN26 ARG27 GLY28 VAL29 VAL30 SER31 ASN32 ALA33 ASP34 GLY35 SER36 ASN37 THR38 ARG39 SER40 PHE41 ASN42 ILE43 ALA44 LYS45 GLY46 ILE47 ALA48 ASP49 LEU50 LEU51 HIS52 SER53 GLU54 THR55 VAL56 SER57 GLU58 ARG59 LEU60 PRO61 GLY62 GLN63 THR64 SER65 GLY66 ASN67 ALA68 PHE69 GLU70 ALA71 ILE72 CYS73 SER74 GLU75 PHE76 VAL77 GLN78 SER79 ALA80 PHE81 GLU82 LYS83 LEU84 GLN85 HIS86 ILE87 ARG88 PRO89 GLY90 ASP91 TRP92 ASN93 VAL94 LYS95 GLN96 VAL97 GLY98 SER99 ARG100 ASN101 ARG102 LEU103 GLU104 ILE105 ALA106 ARG107 TYR108 GLN109 GLN110 TYR111 ALA112 HIS113 LEU114 THR115 ALA116 LEU117 ALA118 LYS119 ALA120 ALA121 GLU122 GLU123 ASN124 PRO125 GLU126 LEU127 ALA128 ALA129 ALA130 LEU131 GLY132 SER133 ASP134 TYR135 THR136 ILE137 THR138 PRO139 ASP140 ILE141 ILE142 VAL143 THR144 ARG145 ASN146 LEU147 ILE148 ALA149 ASP150 ALA151 GLU152 ILE153 ASN154 ARG155 ASN156 GLU157 PHE158 LEU159 VAL160 ASP161 GLU162 ASN163 ILE164 ALA165 THR166 TYR167 ALA168 SER169 LEU170 ARG171 ALA172 GLY173 ASN174 GLY175 ASN176 MET177 PRO178 LEU179 LEU180 HIS181 ALA182 SER183 ILE184 SER185 CYS186 LYS187 TRP188 THR189 ILE190 ARG191 SER192 ASP193 ARG194 ALA195 GLN196 ASN197 ALA198 ARG199 SER200 GLU201 GLY202 LEU203 ASN204 LEU205 VAL206 ARG207 ASN208 ARG209 LYS210 GLY211 ARG212 LEU213 PRO214 HIS215 ILE216 VAL217 VAL218 VAL219 THR220 ALA221 GLU222 PRO223 THR224 PRO225 SER226 ARG227 ILE228 SER229 SER230 ILE231 ALA232 LEU233 GLY234 THR235 GLY236 GLU237 ILE238 ASP239 CYS240 VAL241 TYR242 HIS243 PHE244 ALA245 LEU246 TYR247 GLU248 LEU249 GLU250 GLN251 ILE252 LEU253 GLN254 SER255 LEU256 ASN257 TYR258 GLU259 ASP260 ALA261 LEU262 ASP263 LEU264 PHE265 TYR266 ILE267 MET268 VAL269 ASN270 GLY271 LYS272 ARG273 LEU274 LYS275 ASP276 ILE277 SER278 ASP279 LEU280 PRO281 LEU282 ASP283 LEU284 ALA285 VAL286
Unit 2 MET1 GLN2 PRO3 LEU4 PHE5 THR6 GLN7 GLU8 ARG9 ARG10 ILE11 PHE12 HIS13 LYS14 LYS15 LEU16 LEU17 ASP18 GLY19 ASN20 ILE21 LEU22 ALA23 THR24 ASN25 ASN26 ARG27 GLY28 VAL29 VAL30 SER31 ASN32 ALA33 ASP34 GLY35 SER36 ASN37 THR38 ARG39 SER40 PHE41 ASN42 ILE43 ALA44 LYS45 GLY46 ILE47 ALA48 ASP49 LEU50 LEU51 HIS52 SER53 GLU54 THR55 VAL56 SER57 GLU58 ARG59 LEU60 PRO61 GLY62 GLN63 THR64 SER65 GLY66 ASN67 ALA68 PHE69 GLU70 ALA71 ILE72 CYS73 SER74 GLU75 PHE76 VAL77 GLN78 SER79 ALA80 PHE81 GLU82 LYS83 LEU84 GLN85 HIS86 ILE87 ARG88 PRO89 GLY90 ASP91 TRP92 ASN93 VAL94 LYS95 GLN96 VAL97 GLY98 SER99 ARG100 ASN101 ARG102 LEU103 GLU104 ILE105 ALA106 ARG107 TYR108 GLN109 GLN110 TYR111 ALA112 HIS113 LEU114 THR115 ALA116 LEU117 ALA118 LYS119 ALA120 ALA121 GLU122 GLU123 ASN124 PRO125 GLU126 LEU127 ALA128 ALA129 ALA130 LEU131 GLY132 SER133 ASP134 TYR135 THR136 ILE137 THR138 PRO139 ASP140 ILE141 ILE142 VAL143 THR144 ARG145 ASN146 LEU147 ILE148 ALA149 ASP150 ALA151 GLU152 ILE153 ASN154 ARG155 ASN156 GLU157 PHE158 LEU159 VAL160 ASP161 GLU162 ASN163 ILE164 ALA165 THR166 TYR167 ALA168 SER169 LEU170 ARG171 ALA172 GLY173 ASN174 GLY175 ASN176 MET177 PRO178 LEU179 LEU180 HIS181 ALA182 SER183 ILE184 SER185 CYS186 LYS187 TRP188 THR189 ILE190 ARG191 SER192 ASP193 ARG194 ALA195 GLN196 ASN197 ALA198 ARG199 SER200 GLU201 GLY202 LEU203 ASN204 LEU205 VAL206 ARG207 ASN208 ARG209 LYS210 GLY211 ARG212 LEU213 PRO214 HIS215 ILE216 VAL217 VAL218 VAL219 THR220 ALA221 GLU222 PRO223 THR224 PRO225 SER226 ARG227 ILE228 SER229 SER230 ILE231 ALA232 LEU233 GLY234 THR235 GLY236 GLU237 ILE238 ASP239 CYS240 VAL241 TYR242 HIS243 PHE244 ALA245 LEU246 TYR247 GLU248 LEU249 GLU250 GLN251 ILE252 LEU253 GLN254 SER255 LEU256 ASN257 TYR258 GLU259 ASP260 ALA261 LEU262 ASP263 LEU264 PHE265 TYR266 ILE267 MET268 VAL269 ASN270 GLY271 LYS272 ARG273 LEU274 LYS275 ASP276 ILE277 SER278 ASP279 LEU280 PRO281 LEU282 ASP283 LEU284 ALA285 VAL286

Other macromolecules
Unit 3 DT1 DG2 DC3 DG4 DC5 DC6 DG7 DG8 DC9 DG10 DC11
Unit 4 DT1 DG2 DC3 DG4 DC5 DC6 DG7 DG8 DC9 DG10 DC11

Ligands
Unit 5 CA1287
Unit 6 CA1287
Unit 7 CA1000

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany