4A69 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF HDAC3 BOUND TO COREPRESSOR AND INOSITOL TETRAPH
• Keywords: TRANSCRIPTION, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4A69	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HISTONE DEACETYLASE 3,	A	369	2971	0
2	Protein	HISTONE DEACETYLASE 3,	B	369	2971	0
3	Protein	NUCLEAR RECEPTOR COREPRESSOR 2	C	69	582	0
4	Protein	NUCLEAR RECEPTOR COREPRESSOR 2	D	68	571	0
5	Ligand	HISTONE DEACETYLASE 3,	A	6	0	19
6	Ligand	HISTONE DEACETYLASE 3,	B	6	0	19
7	Ligand	NUCLEAR RECEPTOR COREPRESSOR 2	C	1	0	28
8	Ligand	NUCLEAR RECEPTOR COREPRESSOR 2	D	1	0	28
9	Water			347	0	347
total				1236	7095	441

Proteins

Unit 1	ALA 2 LYS 3 THR 4 VAL 5 ALA 6 TYR 7 PHE 8 TYR 9 ASP 10 PRO 11 ASP 12 VAL 13 GLY 14 ASN 15 PHE 16 HIS 17 TYR 18 GLY 19 ALA 20 GLY 21 HIS 22 PRO 23 MET 24 LYS 25 PRO 26 HIS 27 ARG 28 LEU 29 ALA 30 LEU 31 THR 32 HIS 33 SER 34 LEU 35 VAL 36 LEU 37 HIS 38 TYR 39 GLY 40 LEU 41 TYR 42 LYS 43 LYS 44 MET 45 ILE 46 VAL 47 PHE 48 LYS 49 PRO 50 TYR 51 GLN 52 ALA 53 SER 54 GLN 55 HIS 56 ASP 57 MET 58 CYS 59 ARG 60 PHE 61 HIS 62 SER 63 GLU 64 ASP 65 TYR 66 ILE 67 ASP 68 PHE 69 LEU 70 GLN 71 ARG 72 VAL 73 SER 74 PRO 75 THR 76 ASN 77 MET 78 GLN 79 GLY 80 PHE 81 THR 82 LYS 83 SER 84 LEU 85 ASN 86 ALA 87 PHE 88 ASN 89 VAL 90 GLY 91 ASP 92 ASP 93 CYS 94 PRO 95 VAL 96 PHE 97 PRO 98 GLY 99 LEU 100 PHE 101 GLU 102 PHE 103 CYS 104 SER 105 ARG 106 TYR 107 THR 108 GLY 109 ALA 110 SER 111 LEU 112 GLN 113 GLY 114 ALA 115 THR 116 GLN 117 LEU 118 ASN 119 ASN 120 LYS 121 ILE 122 CYS 123 ASP 124 ILE 125 ALA 126 ILE 127 ASN 128 TRP 129 ALA 130 GLY 131 GLY 132 LEU 133 HIS 134 HIS 135 ALA 136 LYS 137 LYS 138 PHE 139 GLU 140 ALA 141 SER 142 GLY 143 PHE 144 CYS 145 TYR 146 VAL 147 ASN 148 ASP 149 ILE 150 VAL 151 ILE 152 GLY 153 ILE 154 LEU 155 GLU 156 LEU 157 LEU 158 LYS 159 TYR 160 HIS 161 PRO 162 ARG 163 VAL 164 LEU 165 TYR 166 ILE 167 ASP 168 ILE 169 ASP 170 ILE 171 HIS 172 HIS 173 GLY 174 ASP 175 GLY 176 VAL 177 GLN 178 GLU 179 ALA 180 PHE 181 TYR 182 LEU 183 THR 184 ASP 185 ARG 186 VAL 187 MET 188 THR 189 VAL 190 SER 191 PHE 192 HIS 193 LYS 194 TYR 195 GLY 196 ASN 197 TYR 198 PHE 199 PHE 200 PRO 201 GLY 202 THR 203 GLY 204 ASP 205 MET 206 TYR 207 GLU 208 VAL 209 GLY 210 ALA 211 GLU 212 SER 213 GLY 214 ARG 215 TYR 216 TYR 217 CYS 218 LEU 219 ASN 220 VAL 221 PRO 222 LEU 223 ARG 224 ASP 225 GLY 226 ILE 227 ASP 228 ASP 229 GLN 230 SER 231 TYR 232 LYS 233 HIS 234 LEU 235 PHE 236 GLN 237 PRO 238 VAL 239 ILE 240 ASN 241 GLN 242 VAL 243 VAL 244 ASP 245 PHE 246 TYR 247 GLN 248 PRO 249 THR 250 CYS 251 ILE 252 VAL 253 LEU 254 GLN 255 CYS 256 GLY 257 ALA 258 ASP 259 SER 260 LEU 261 GLY 262 CYS 263 ASP 264 ARG 265 LEU 266 GLY 267 CYS 268 PHE 269 ASN 270 LEU 271 SER 272 ILE 273 ARG 274 GLY 275 HIS 276 GLY 277 GLU 278 CYS 279 VAL 280 GLU 281 TYR 282 VAL 283 LYS 284 SER 285 PHE 286 ASN 287 ILE 288 PRO 289 LEU 290 LEU 291 VAL 292 LEU 293 GLY 294 GLY 295 GLY 296 GLY 297 TYR 298 THR 299 VAL 300 ARG 301 ASN 302 VAL 303 ALA 304 ARG 305 CYS 306 TRP 307 THR 308 TYR 309 GLU 310 THR 311 SER 312 LEU 313 LEU 314 VAL 315 GLU 316 GLU 317 ALA 318 ILE 319 SER 320 GLU 321 GLU 322 LEU 323 PRO 324 TYR 325 SER 326 GLU 327 TYR 328 PHE 329 GLU 330 TYR 331 PHE 332 ALA 333 PRO 334 ASP 335 PHE 336 THR 337 LEU 338 HIS 339 PRO 340 ASP 341 VAL 342 SER 343 THR 344 ARG 345 ILE 346 GLU 347 ASN 348 GLN 349 ASN 350 SER 351 ARG 352 GLN 353 TYR 354 LEU 355 ASP 356 GLN 357 ILE 358 ARG 359 GLN 360 THR 361 ILE 362 PHE 363 GLU 364 ASN 365 LEU 366 LYS 367 MET 368 LEU 369 ASN 370
Unit 2	ALA 2 LYS 3 THR 4 VAL 5 ALA 6 TYR 7 PHE 8 TYR 9 ASP 10 PRO 11 ASP 12 VAL 13 GLY 14 ASN 15 PHE 16 HIS 17 TYR 18 GLY 19 ALA 20 GLY 21 HIS 22 PRO 23 MET 24 LYS 25 PRO 26 HIS 27 ARG 28 LEU 29 ALA 30 LEU 31 THR 32 HIS 33 SER 34 LEU 35 VAL 36 LEU 37 HIS 38 TYR 39 GLY 40 LEU 41 TYR 42 LYS 43 LYS 44 MET 45 ILE 46 VAL 47 PHE 48 LYS 49 PRO 50 TYR 51 GLN 52 ALA 53 SER 54 GLN 55 HIS 56 ASP 57 MET 58 CYS 59 ARG 60 PHE 61 HIS 62 SER 63 GLU 64 ASP 65 TYR 66 ILE 67 ASP 68 PHE 69 LEU 70 GLN 71 ARG 72 VAL 73 SER 74 PRO 75 THR 76 ASN 77 MET 78 GLN 79 GLY 80 PHE 81 THR 82 LYS 83 SER 84 LEU 85 ASN 86 ALA 87 PHE 88 ASN 89 VAL 90 GLY 91 ASP 92 ASP 93 CYS 94 PRO 95 VAL 96 PHE 97 PRO 98 GLY 99 LEU 100 PHE 101 GLU 102 PHE 103 CYS 104 SER 105 ARG 106 TYR 107 THR 108 GLY 109 ALA 110 SER 111 LEU 112 GLN 113 GLY 114 ALA 115 THR 116 GLN 117 LEU 118 ASN 119 ASN 120 LYS 121 ILE 122 CYS 123 ASP 124 ILE 125 ALA 126 ILE 127 ASN 128 TRP 129 ALA 130 GLY 131 GLY 132 LEU 133 HIS 134 HIS 135 ALA 136 LYS 137 LYS 138 PHE 139 GLU 140 ALA 141 SER 142 GLY 143 PHE 144 CYS 145 TYR 146 VAL 147 ASN 148 ASP 149 ILE 150 VAL 151 ILE 152 GLY 153 ILE 154 LEU 155 GLU 156 LEU 157 LEU 158 LYS 159 TYR 160 HIS 161 PRO 162 ARG 163 VAL 164 LEU 165 TYR 166 ILE 167 ASP 168 ILE 169 ASP 170 ILE 171 HIS 172 HIS 173 GLY 174 ASP 175 GLY 176 VAL 177 GLN 178 GLU 179 ALA 180 PHE 181 TYR 182 LEU 183 THR 184 ASP 185 ARG 186 VAL 187 MET 188 THR 189 VAL 190 SER 191 PHE 192 HIS 193 LYS 194 TYR 195 GLY 196 ASN 197 TYR 198 PHE 199 PHE 200 PRO 201 GLY 202 THR 203 GLY 204 ASP 205 MET 206 TYR 207 GLU 208 VAL 209 GLY 210 ALA 211 GLU 212 SER 213 GLY 214 ARG 215 TYR 216 TYR 217 CYS 218 LEU 219 ASN 220 VAL 221 PRO 222 LEU 223 ARG 224 ASP 225 GLY 226 ILE 227 ASP 228 ASP 229 GLN 230 SER 231 TYR 232 LYS 233 HIS 234 LEU 235 PHE 236 GLN 237 PRO 238 VAL 239 ILE 240 ASN 241 GLN 242 VAL 243 VAL 244 ASP 245 PHE 246 TYR 247 GLN 248 PRO 249 THR 250 CYS 251 ILE 252 VAL 253 LEU 254 GLN 255 CYS 256 GLY 257 ALA 258 ASP 259 SER 260 LEU 261 GLY 262 CYS 263 ASP 264 ARG 265 LEU 266 GLY 267 CYS 268 PHE 269 ASN 270 LEU 271 SER 272 ILE 273 ARG 274 GLY 275 HIS 276 GLY 277 GLU 278 CYS 279 VAL 280 GLU 281 TYR 282 VAL 283 LYS 284 SER 285 PHE 286 ASN 287 ILE 288 PRO 289 LEU 290 LEU 291 VAL 292 LEU 293 GLY 294 GLY 295 GLY 296 GLY 297 TYR 298 THR 299 VAL 300 ARG 301 ASN 302 VAL 303 ALA 304 ARG 305 CYS 306 TRP 307 THR 308 TYR 309 GLU 310 THR 311 SER 312 LEU 313 LEU 314 VAL 315 GLU 316 GLU 317 ALA 318 ILE 319 SER 320 GLU 321 GLU 322 LEU 323 PRO 324 TYR 325 SER 326 GLU 327 TYR 328 PHE 329 GLU 330 TYR 331 PHE 332 ALA 333 PRO 334 ASP 335 PHE 336 THR 337 LEU 338 HIS 339 PRO 340 ASP 341 VAL 342 SER 343 THR 344 ARG 345 ILE 346 GLU 347 ASN 348 GLN 349 ASN 350 SER 351 ARG 352 GLN 353 TYR 354 LEU 355 ASP 356 GLN 357 ILE 358 ARG 359 GLN 360 THR 361 ILE 362 PHE 363 GLU 364 ASN 365 LEU 366 LYS 367 MET 368 LEU 369 ASN 370
Unit 3	LYS 408 PHE 409 ILE 410 ASN 411 MET 412 ASN 413 GLY 414 LEU 415 MET 416 ALA 417 ASP 418 PRO 419 MET 420 LYS 421 VAL 422 TYR 423 LYS 424 ASP 425 ARG 426 GLN 427 VAL 428 MET 429 ASN 430 MET 431 TRP 432 SER 433 GLU 434 GLN 435 GLU 436 LYS 437 GLU 438 THR 439 PHE 440 ARG 441 GLU 442 LYS 443 PHE 444 MET 445 GLN 446 HIS 447 PRO 448 LYS 449 ASN 450 PHE 451 GLY 452 LEU 453 ILE 454 ALA 455 SER 456 PHE 457 LEU 458 GLU 459 ARG 460 LYS 461 THR 462 VAL 463 ALA 464 GLU 465 CYS 466 VAL 467 LEU 468 TYR 469 TYR 470 TYR 471 LEU 472 THR 473 LYS 474 LYS 475 ASN 476
Unit 4	LYS 408 PHE 409 ILE 410 ASN 411 MET 412 ASN 413 GLY 414 LEU 415 MET 416 ALA 417 ASP 418 PRO 419 MET 420 LYS 421 VAL 422 TYR 423 LYS 424 ASP 425 ARG 426 GLN 427 VAL 428 MET 429 ASN 430 MET 431 TRP 432 SER 433 GLU 434 GLN 435 GLU 436 LYS 437 GLU 438 THR 439 PHE 440 ARG 441 GLU 442 LYS 443 PHE 444 MET 445 GLN 446 HIS 447 PRO 448 LYS 449 ASN 450 PHE 451 GLY 452 LEU 453 ILE 454 ALA 455 SER 456 PHE 457 LEU 458 GLU 459 ARG 460 LYS 461 THR 462 VAL 463 ALA 464 GLU 465 CYS 466 VAL 467 LEU 468 TYR 469 TYR 470 TYR 471 LEU 472 THR 473 LYS 474 LYS 475

Ligands

Unit 5	ZN 500 ACT 501 K 503 K 504 GOL 505 GOL 506
Unit 6	ZN 500 ACT 501 K 503 K 504 GOL 505 GOL 506
Unit 7	I0P 501
Unit 8	I0P 501