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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF DUCK RIG-I C-TERMINAL DOMAIN (CTD) WITH 14-MER
Keywords RNA BINDING PROTEIN-RNA COMPLEX, SUPERFAMILY 2 RNA HELICASE, DSRNA BINDING, ANTIVIRAL SIGNALLING PATHWAY
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4A2X     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RETINOIC ACID INDUCIBLE PROTEIN I  A 120 991 0
2  Protein   RETINOIC ACID INDUCIBLE PROTEIN I  B 120 991 0
3  Protein   RETINOIC ACID INDUCIBLE PROTEIN I  C 120 991 0
4  Protein   RETINOIC ACID INDUCIBLE PROTEIN I  D 120 991 0
5  RNA    L 14 305 0
6  RNA    M 14 286 0
7  RNA    N 14 305 0
8  RNA    O 14 286 0
9  Ligand   RETINOIC ACID INDUCIBLE PROTEIN I  A 1 0 1
10  Ligand   RETINOIC ACID INDUCIBLE PROTEIN I  B 1 0 1
11  Ligand   RETINOIC ACID INDUCIBLE PROTEIN I  C 1 0 1
12  Ligand   RETINOIC ACID INDUCIBLE PROTEIN I  D 1 0 1
total       540 5146 4
Proteins
Unit 1 GLN807 LYS808 ASN809 LEU810 LEU811 CYS812 GLY813 LYS814 CYS815 LYS816 ALA817 TYR818 ALA819 CYS820 SER821 THR822 ASP823 ASP824 ILE825 ARG826 ILE827 ILE828 LYS829 ASP830 SER831 HIS832 HIS833 ILE834 VAL835 LEU836 GLY837 GLU838 ALA839 PHE840 LYS841 GLU842 ARG843 TYR844 THR845 THR846 LYS847 PRO848 HIS849 LYS850 LYS851 PRO852 MET853 GLN854 PHE855 ASP856 GLY857 PHE858 GLU859 LYS860 LYS861 SER862 LYS863 MET864 TYR865 CYS866 ARG867 ASN868 ASN869 ASN870 CYS871 GLN872 HIS873 ASP874 TRP875 GLY876 ILE877 THR878 VAL879 LYS880 TYR881 LEU882 THR883 PHE884 ASP885 ASN886 LEU887 PRO888 VAL889 ILE890 LYS891 ILE892 LYS893 SER894 PHE895 VAL896 MET897 GLU898 SER899 GLN905 MET906 ASP907 PHE908 GLN909 LYS910 TRP911 LYS912 SER913 ILE914 ASN915 SER916 SER917 LEU918 LYS919 ASN920 PHE921 ASP922 VAL923 GLU924 GLU925 MET926 SER927 ASN928 LEU929 TYR930 PRO931
Unit 2 GLN807 LYS808 ASN809 LEU810 LEU811 CYS812 GLY813 LYS814 CYS815 LYS816 ALA817 TYR818 ALA819 CYS820 SER821 THR822 ASP823 ASP824 ILE825 ARG826 ILE827 ILE828 LYS829 ASP830 SER831 HIS832 HIS833 ILE834 VAL835 LEU836 GLY837 GLU838 ALA839 PHE840 LYS841 GLU842 ARG843 TYR844 THR845 THR846 LYS847 PRO848 HIS849 LYS850 LYS851 PRO852 MET853 GLN854 PHE855 ASP856 GLY857 PHE858 GLU859 LYS860 LYS861 SER862 LYS863 MET864 TYR865 CYS866 ARG867 ASN868 ASN869 ASN870 CYS871 GLN872 HIS873 ASP874 TRP875 GLY876 ILE877 THR878 VAL879 LYS880 TYR881 LEU882 THR883 PHE884 ASP885 ASN886 LEU887 PRO888 VAL889 ILE890 LYS891 ILE892 LYS893 SER894 PHE895 VAL896 MET897 GLU898 SER899 GLN905 MET906 ASP907 PHE908 GLN909 LYS910 TRP911 LYS912 SER913 ILE914 ASN915 SER916 SER917 LEU918 LYS919 ASN920 PHE921 ASP922 VAL923 GLU924 GLU925 MET926 SER927 ASN928 LEU929 TYR930 PRO931
Unit 3 GLN807 LYS808 ASN809 LEU810 LEU811 CYS812 GLY813 LYS814 CYS815 LYS816 ALA817 TYR818 ALA819 CYS820 SER821 THR822 ASP823 ASP824 ILE825 ARG826 ILE827 ILE828 LYS829 ASP830 SER831 HIS832 HIS833 ILE834 VAL835 LEU836 GLY837 GLU838 ALA839 PHE840 LYS841 GLU842 ARG843 TYR844 THR845 THR846 LYS847 PRO848 HIS849 LYS850 LYS851 PRO852 MET853 GLN854 PHE855 ASP856 GLY857 PHE858 GLU859 LYS860 LYS861 SER862 LYS863 MET864 TYR865 CYS866 ARG867 ASN868 ASN869 ASN870 CYS871 GLN872 HIS873 ASP874 TRP875 GLY876 ILE877 THR878 VAL879 LYS880 TYR881 LEU882 THR883 PHE884 ASP885 ASN886 LEU887 PRO888 VAL889 ILE890 LYS891 ILE892 LYS893 SER894 PHE895 VAL896 MET897 GLU898 SER899 GLN905 MET906 ASP907 PHE908 GLN909 LYS910 TRP911 LYS912 SER913 ILE914 ASN915 SER916 SER917 LEU918 LYS919 ASN920 PHE921 ASP922 VAL923 GLU924 GLU925 MET926 SER927 ASN928 LEU929 TYR930 PRO931
Unit 4 GLN807 LYS808 ASN809 LEU810 LEU811 CYS812 GLY813 LYS814 CYS815 LYS816 ALA817 TYR818 ALA819 CYS820 SER821 THR822 ASP823 ASP824 ILE825 ARG826 ILE827 ILE828 LYS829 ASP830 SER831 HIS832 HIS833 ILE834 VAL835 LEU836 GLY837 GLU838 ALA839 PHE840 LYS841 GLU842 ARG843 TYR844 THR845 THR846 LYS847 PRO848 HIS849 LYS850 LYS851 PRO852 MET853 GLN854 PHE855 ASP856 GLY857 PHE858 GLU859 LYS860 LYS861 SER862 LYS863 MET864 TYR865 CYS866 ARG867 ASN868 ASN869 ASN870 CYS871 GLN872 HIS873 ASP874 TRP875 GLY876 ILE877 THR878 VAL879 LYS880 TYR881 LEU882 THR883 PHE884 ASP885 ASN886 LEU887 PRO888 VAL889 ILE890 LYS891 ILE892 LYS893 SER894 PHE895 VAL896 MET897 GLU898 SER899 GLN905 MET906 ASP907 PHE908 GLN909 LYS910 TRP911 LYS912 SER913 ILE914 ASN915 SER916 SER917 LEU918 LYS919 ASN920 PHE921 ASP922 VAL923 GLU924 GLU925 MET926 SER927 ASN928 LEU929 TYR930 PRO931
Nucleic acids
Unit 5 G1 G2 G3 A4 G5 A6 A7 C8 A9 A10 C11 G12 C13 G14
Unit 6 C1 G2 C3 G4 U5 U6 G7 U8 U9 C10 U11 C12 C13 C14
Unit 7 G1 G2 G3 A4 G5 A6 A7 C8 A9 A10 C11 G12 C13 G14
Unit 8 C1 G2 C3 G4 U5 U6 G7 U8 U9 C10 U11 C12 C13 C14
Ligands
Unit 9 ZN1000
Unit 10 ZN1000
Unit 11 ZN1000
Unit 12 ZN1000
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany