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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE NUCLEOCAPSID PROTEIN FROM BUNYAMWER BOUND TO RNA
Keywords VIRAL PROTEIN-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3ZLA     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOPROTEIN  A 229 1852 0
2  Protein   NUCLEOPROTEIN  B 229 1852 0
3  Protein   NUCLEOPROTEIN  C 229 1852 0
4  Protein   NUCLEOPROTEIN  D 228 1847 0
5  Protein   NUCLEOPROTEIN  E 229 1852 0
6  Protein   NUCLEOPROTEIN  F 229 1852 0
7  Protein   NUCLEOPROTEIN  G 229 1852 0
8  Protein   NUCLEOPROTEIN  H 229 1852 0
9  RNA    I 44 880 0
10  RNA    J 44 880 0
total       1919 16571 0
Proteins
Unit 1 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 2 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 3 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 4 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 5 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 6 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 7 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Unit 8 GLY-1 SER0 MET1 ILE2 GLU3 LEU4 GLU5 PHE6 HIS7 ASP8 VAL9 ALA10 THR16 PHE17 ASP18 PRO19 GLU20 VAL21 ALA22 TYR23 ALA24 ASN25 PHE26 LYS27 ARG28 VAL29 HIS30 THR31 THR32 GLY33 LEU34 SER35 TYR36 ASP37 HIS38 ILE39 ARG40 ILE41 PHE42 TYR43 ILE44 LYS45 GLY46 ARG47 GLU48 ILE49 LYS50 THR51 SER52 LEU53 ALA54 LYS55 ARG56 SER57 GLU58 TRP59 GLU60 VAL61 THR62 LEU63 ASN64 LEU65 GLY66 GLY67 TRP68 LYS69 ILE70 THR71 VAL72 TYR73 ASN74 THR75 ASN76 PHE77 PRO78 GLY79 ASN80 ARG81 ASN82 ASN83 PRO84 VAL85 PRO86 ASP87 ASP88 GLY89 LEU90 THR91 LEU92 HIS93 ARG94 LEU95 SER96 GLY97 PHE98 LEU99 ALA100 ARG101 TYR102 LEU103 LEU104 GLU105 LYS106 MET107 LEU108 LYS109 VAL110 SER111 GLU112 PRO113 GLU114 LYS115 LEU116 ILE117 ILE118 LYS119 SER120 LYS121 ILE122 ILE123 ASN124 PRO125 LEU126 ALA127 GLU128 LYS129 ASN130 GLY131 ILE132 THR133 TRP134 ASN135 ASP136 GLY137 GLU138 GLU139 VAL140 TYR141 LEU142 SER143 PHE144 PHE145 PRO146 GLY147 SER148 GLU149 MET150 PHE151 LEU152 GLY153 THR154 PHE155 ARG156 PHE157 TYR158 PRO159 LEU160 ALA161 ILE162 GLY163 ILE164 TYR165 LYS166 VAL167 GLN168 ARG169 LYS170 GLU171 MET172 GLU173 PRO174 LYS175 TYR176 LEU177 GLU178 LYS179 THR180 MET181 ARG182 GLN183 ARG184 TYR185 MET186 GLY187 LEU188 GLU189 ALA190 ALA191 THR192 TRP193 THR194 VAL195 SER196 LYS197 LEU198 THR199 GLU200 VAL201 GLN202 SER203 ALA204 LEU205 THR206 VAL207 VAL208 SER209 SER210 LEU211 GLY212 TRP213 LYS214 LYS215 THR216 ASN217 VAL218 SER219 ALA220 ALA221 ALA222 ARG223 ASP224 PHE225 LEU226 ALA227 LYS228 PHE229 GLY230 ILE231 ASN232
Nucleic acids
Unit 9 U1 U2 U3 U4 U5 U6 U7 U8 U9 U10 U11 U12 U13 U14 U15 U16 U17 U18 U19 U20 U21 U22 U23 U24 U25 U26 U27 U28 U29 U30 U31 U32 U33 U34 U35 U36 U37 U38 U39 U40 U41 U42 U43 U44
Unit 10 U1 U2 U3 U4 U5 U6 U7 U8 U9 U10 U11 U12 U13 U14 U15 U16 U17 U18 U19 U20 U21 U22 U23 U24 U25 U26 U27 U28 U29 U30 U31 U32 U33 U34 U35 U36 U37 U38 U39 U40 U41 U42 U43 U44
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany