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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE C. ELEGANS SMG5-SMG7 COMPLEX
Keywords MRNA-BINDING PROTEIN, NMD, PHOSPHO-PEPTIDE BINDING DOMAINS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3ZHE     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NONSENSE-MEDIATED MRNA DECAY PROTEIN  A 399 3110 0
2  Protein   PROTEIN SMG-7  B 390 3037 0
3  Protein   NONSENSE-MEDIATED MRNA DECAY PROTEIN  C 388 3019 0
4  Protein   PROTEIN SMG-7  D 387 2975 0
total       1564 12141 0
Proteins
Unit 1 GLN2 LYS3 SER4 ASP5 GLU6 VAL7 THR8 GLU9 LYS10 PHE11 LYS12 ARG13 TYR14 CYS15 ASN16 GLN17 LEU18 GLU19 LYS20 TYR21 GLY22 GLN23 THR24 GLU25 ASN26 VAL27 HIS28 SER29 PRO30 VAL31 MET32 ALA33 MET34 LEU35 ARG36 ARG37 LYS38 GLY39 ARG40 LYS41 GLN42 LEU43 ILE44 GLU45 ILE46 MET47 LYS48 ARG49 ASP50 GLY51 ASP52 CYS53 THR54 SER55 SER56 ILE57 ASN58 LYS59 LEU60 TRP61 ILE62 VAL63 GLY64 TYR65 TYR66 HIS67 PRO68 PHE69 GLN70 PHE71 PHE72 ILE73 ARG74 ASP75 LYS76 GLU77 LYS78 ASN79 MET80 ALA81 ILE82 ALA83 VAL84 LEU85 LEU86 THR87 MET88 PHE89 CYS90 GLY91 GLU92 LEU93 GLN94 GLU95 MET96 LEU97 SER98 LEU99 PRO100 ASP101 ASP102 LYS103 TYR104 PRO105 ALA106 LEU107 TRP108 ASN109 MET110 TYR111 ILE112 GLY113 ASP114 PHE115 HIS116 ARG117 TYR118 MET119 PRO120 ASP121 GLU122 GLU123 ILE124 GLN125 LYS126 CYS127 LEU128 ALA129 VAL130 GLY131 TYR132 TYR133 SER134 ARG135 ALA136 ILE137 ASP138 LEU139 ASP140 PRO141 ASN142 GLN143 GLY144 ARG145 ALA146 PHE147 HIS148 VAL149 LEU150 ALA151 GLY152 LEU153 ARG154 ALA155 ASP156 LEU157 ASN158 VAL159 ALA160 GLN161 LYS162 LEU163 ARG164 LEU165 MET166 ILE167 LEU168 GLY169 GLN170 LEU171 ALA172 ASP173 ALA174 PRO175 TYR176 LYS177 LYS178 GLY179 THR180 GLU181 LEU182 LEU183 GLU184 TYR185 LEU186 LYS187 PHE188 PRO189 GLN190 LYS191 GLU192 SER193 THR194 ASP195 LYS196 LEU197 MET198 VAL199 ASP200 PHE201 VAL202 ILE203 TRP204 ALA205 LEU206 ASN207 GLU208 LYS209 SER210 LYS211 ARG212 MET213 ASP214 TYR215 GLN216 MET217 THR218 GLY219 ILE220 LYS221 ILE222 VAL223 ASN224 GLU225 PHE226 LYS227 ALA228 GLU229 ILE230 GLU231 GLN232 LYS233 LEU234 GLU235 PHE236 ASP237 TRP238 SER239 LEU240 ILE241 MET242 SER243 THR244 CYS245 ARG246 LEU247 ALA248 SER249 LYS250 LEU251 ALA252 MET253 LYS254 LYS255 PHE256 GLY257 PHE258 GLN259 GLN260 PHE261 TYR262 ASN263 CYS264 PHE265 ASP266 THR267 ILE268 SER269 THR270 LEU271 TYR272 ILE273 THR274 ILE275 TYR276 SER277 ARG278 THR279 ILE280 SER281 SER282 LYS283 CYS284 LEU285 LEU286 ALA287 GLU288 ALA289 ILE290 SER291 TRP292 ILE293 SER294 ASP295 SER296 ALA297 GLU298 ILE299 LEU300 GLY301 HIS302 LEU303 ASP304 GLU305 GLN306 LYS307 ASN308 GLU309 PRO310 HIS311 PHE312 GLN313 LYS314 LEU315 SER316 VAL317 PHE318 ALA319 LYS320 THR321 LYS322 TRP323 ASN324 GLU325 LEU326 ASN327 ASP328 LEU329 VAL330 MET331 ASN332 HIS333 ILE334 ASN335 SER336 VAL337 PHE338 THR339 SER340 MET341 SER342 LEU343 THR344 ILE345 ASN346 PRO347 SER348 ILE349 SER350 MET351 THR352 SER353 PHE354 LEU355 LEU356 ASN357 GLY358 PRO359 ILE360 SER361 GLU362 PRO363 ASN364 VAL365 GLU366 PHE367 LEU368 SER369 GLN370 LEU371 ILE372 ASN373 TYR374 LEU375 VAL376 SER377 VAL378 GLU379 PHE380 PRO381 PRO382 MET383 GLU384 ILE385 ILE386 HIS387 ASP388 ARG389 GLU390 GLU391 SER392 GLY393 PRO394 LEU395 LEU396 ARG397 ARG398 ILE399 ASN400
Unit 2 MET1 SER2 ASP3 GLU4 TRP5 GLU6 GLN7 LEU8 THR9 VAL10 GLU11 LEU12 ARG13 LYS14 ILE15 PRO16 ARG17 GLY18 THR19 GLU20 ALA21 ALA22 PRO23 GLN24 TYR25 LEU26 ARG27 HIS28 LEU29 MET30 LYS31 MET32 PHE33 VAL34 ALA35 ASP36 PHE37 GLU38 THR39 ALA40 VAL41 SER42 LYS43 ARG44 PHE45 ASP46 VAL47 LYS48 PHE49 TRP50 ASN51 LYS52 LEU53 LYS54 SER55 MET56 MET57 ASP58 GLU59 ILE60 THR61 LYS62 ALA63 MET64 GLU65 ASN66 ASP67 ARG68 LEU69 VAL70 ASN71 HIS72 ASN73 VAL74 GLN75 ASN76 LEU77 ALA78 ILE79 GLY80 PHE81 LEU82 THR83 ASP84 LEU85 SER86 LEU87 LEU88 VAL89 HIS90 TYR91 HIS92 TYR93 GLU94 ILE95 PRO96 ASN97 TYR98 GLY99 ASN100 ASP101 ILE102 SER103 LYS104 GLN105 LEU106 THR107 TRP108 THR109 PRO110 ASP111 VAL112 PHE113 LEU114 ASN115 ARG116 LYS117 PRO118 ILE119 LYS120 SER121 LYS122 LYS123 ASN124 SER125 ARG126 VAL127 PHE128 MET129 ALA130 TYR131 VAL132 LEU133 LEU134 ARG135 MET136 GLY137 ASP138 LEU139 MET140 ARG141 TYR142 LYS143 GLU144 ASN145 TYR146 PRO147 LYS148 ALA149 GLN150 GLU151 TYR152 TYR153 GLU154 GLN155 SER156 CYS157 ARG158 ILE159 ASN160 PRO161 ALA162 ASP163 GLY164 ALA165 VAL166 TRP167 ASN168 GLN169 LEU170 GLY171 LEU172 ILE173 SER174 SER175 LEU176 GLY177 ALA178 LYS179 ASN180 LEU181 GLU182 SER183 VAL184 TYR185 PHE186 HIS187 THR188 ARG189 ALA190 LEU191 HIS192 ALA193 THR194 MET195 GLU196 PHE197 PRO198 THR199 ALA200 SER201 GLY202 GLY203 LEU204 THR205 ASN206 ILE207 PHE208 LYS209 ASN210 PHE211 ALA212 ASN213 ARG214 ASP215 ILE216 SER217 ARG218 PRO219 MET220 PRO221 ILE222 LYS223 ASP224 LEU225 TYR226 LEU227 SER228 CYS229 LEU230 GLY231 ARG232 ILE233 HIS234 PHE235 LEU236 LEU237 GLU238 ILE239 GLU240 ASP241 SER242 SER243 VAL244 HIS245 LEU246 GLN247 LYS248 ILE249 GLY250 GLU251 GLU252 ALA253 ALA254 THR255 SER256 LYS257 GLU258 MET259 ILE260 VAL261 PRO262 LEU263 MET264 SER265 VAL266 TYR267 LYS268 HIS269 LEU270 GLU271 ASP272 GLY273 THR274 GLU275 LEU276 GLU277 GLN278 ARG279 ALA280 VAL281 GLU282 TYR283 VAL284 LYS285 THR286 ILE287 TRP288 CYS289 THR290 ALA291 TYR292 ARG293 SER294 LEU295 LEU296 LYS297 THR298 LEU299 ASP300 ASP301 TYR302 LYS303 GLU304 GLU305 SER306 LYS307 LYS308 LEU309 ALA310 ASP311 VAL312 PRO313 HIS314 LEU315 LEU316 HIS317 ILE318 LEU319 ALA320 LEU321 LEU322 LEU323 CYS324 ALA325 PRO326 LYS327 LEU328 LEU329 ARG330 GLY331 ILE332 GLU333 ASP334 GLN335 THR336 GLU337 ASP338 GLU339 VAL340 THR341 SER342 ILE343 CYS344 GLU345 TRP346 LEU347 LEU348 CYS349 ALA350 CYS352 ASP353 GLU354 LYS355 ILE356 LYS357 ASP358 SER359 ASP360 ALA361 PHE362 GLY363 TYR364 PHE365 HIS366 CYS367 LEU368 GLN369 ARG370 ILE371 GLN372 TYR373 PRO374 LEU375 THR376 ARG377 THR378 GLN379 LEU380 ALA381 GLN382 LYS383 LEU384 VAL385 GLU386 ILE387 GLU388 ASP389 GLU390 ASP391
Unit 3 ASP5 GLU6 VAL7 THR8 GLU9 LYS10 PHE11 LYS12 ARG13 TYR14 CYS15 ASN16 GLN17 LEU18 GLU19 LYS20 TYR21 GLY22 GLN23 THR24 GLU25 ASN26 VAL27 HIS28 SER29 PRO30 VAL31 MET32 ALA33 MET34 LEU35 ARG36 ARG37 LYS38 GLY39 ARG40 LYS41 GLN42 LEU43 ILE44 GLU45 ILE46 MET47 LYS48 ARG49 ASP50 GLY51 ASP52 CYS53 THR54 SER55 SER56 ILE57 ASN58 LYS59 LEU60 TRP61 ILE62 VAL63 GLY64 TYR65 TYR66 HIS67 PRO68 PHE69 GLN70 PHE71 PHE72 ILE73 ARG74 ASP75 ALA81 ILE82 ALA83 VAL84 LEU85 LEU86 THR87 MET88 PHE89 CYS90 GLY91 GLU92 LEU93 GLN94 GLU95 MET96 LEU97 SER98 LEU99 PRO100 ASP101 ASP102 LYS103 TYR104 PRO105 ALA106 LEU107 TRP108 ASN109 MET110 TYR111 ILE112 GLY113 ASP114 PHE115 HIS116 ARG117 TYR118 MET119 PRO120 ASP121 GLU122 GLU123 ILE124 GLN125 LYS126 CYS127 LEU128 ALA129 VAL130 GLY131 TYR132 TYR133 SER134 ARG135 ALA136 ILE137 ASP138 LEU139 ASP140 PRO141 ASN142 GLN143 GLY144 ARG145 ALA146 PHE147 HIS148 VAL149 LEU150 ALA151 GLY152 LEU153 ARG154 ALA155 ASP156 LEU157 ASN158 VAL159 ALA160 GLN161 LYS162 LEU163 ARG164 LEU165 MET166 ILE167 LEU168 GLY169 GLN170 LEU171 ALA172 ASP173 ALA174 PRO175 TYR176 LYS177 LYS178 GLY179 THR180 GLU181 LEU182 LEU183 GLU184 TYR185 LEU186 LYS187 PHE188 PRO189 GLN190 LYS191 GLU192 SER193 THR194 ASP195 LYS196 LEU197 MET198 VAL199 ASP200 PHE201 VAL202 ILE203 TRP204 ALA205 LEU206 ASN207 GLU208 LYS209 SER210 LYS211 ARG212 MET213 ASP214 TYR215 GLN216 MET217 THR218 GLY219 ILE220 LYS221 ILE222 VAL223 ASN224 GLU225 PHE226 LYS227 ALA228 GLU229 ILE230 GLU231 GLN232 LYS233 LEU234 GLU235 PHE236 ASP237 TRP238 SER239 LEU240 ILE241 MET242 SER243 THR244 CYS245 ARG246 LEU247 ALA248 SER249 LYS250 LEU251 ALA252 MET253 LYS254 LYS255 PHE256 GLY257 PHE258 GLN259 GLN260 PHE261 TYR262 ASN263 CYS264 PHE265 ASP266 THR267 ILE268 SER269 THR270 LEU271 TYR272 ILE273 THR274 ILE275 TYR276 SER277 ARG278 SER281 SER282 LYS283 CYS284 LEU285 LEU286 ALA287 GLU288 ALA289 ILE290 SER291 TRP292 ILE293 SER294 ASP295 SER296 ALA297 GLU298 ILE299 LEU300 GLY301 HIS302 LEU303 ASP304 GLU305 GLN306 LYS307 ASN308 GLU309 PRO310 HIS311 PHE312 GLN313 LYS314 LEU315 SER316 VAL317 PHE318 ALA319 LYS320 THR321 LYS322 TRP323 ASN324 GLU325 LEU326 ASN327 ASP328 LEU329 VAL330 MET331 ASN332 HIS333 ILE334 ASN335 SER336 VAL337 PHE338 THR339 SER340 MET341 SER342 LEU343 THR344 ILE345 ASN346 PRO347 SER348 ILE349 SER350 MET351 THR352 SER353 PHE354 LEU355 LEU356 ASN357 GLY358 PRO359 ILE360 SER361 GLU362 PRO363 ASN364 VAL365 GLU366 PHE367 LEU368 SER369 GLN370 LEU371 ILE372 ASN373 TYR374 LEU375 VAL376 SER377 VAL378 GLU379 PHE380 PRO381 PRO382 MET383 GLU384 ILE385 ILE386 HIS387 ASP388 ARG389 GLU390 GLU391 SER392 GLY393 PRO394 LEU395 LEU396 ARG397 ARG398 ILE399
Unit 4 ASP3 GLU4 TRP5 GLU6 GLN7 LEU8 THR9 VAL10 GLU11 LEU12 ARG13 LYS14 ILE15 PRO16 ARG17 GLY18 THR19 GLU20 ALA21 ALA22 PRO23 GLN24 TYR25 LEU26 ARG27 HIS28 LEU29 MET30 LYS31 MET32 PHE33 VAL34 ALA35 ASP36 PHE37 GLU38 THR39 ALA40 VAL41 SER42 LYS43 ARG44 PHE45 ASP46 VAL47 LYS48 PHE49 TRP50 ASN51 LYS52 LEU53 LYS54 SER55 MET56 MET57 ASP58 GLU59 ILE60 THR61 LYS62 ALA63 MET64 GLU65 ARG68 LEU69 VAL70 ASN71 HIS72 ASN73 VAL74 GLN75 ASN76 LEU77 ALA78 ILE79 GLY80 PHE81 LEU82 THR83 ASP84 LEU85 SER86 LEU87 LEU88 VAL89 HIS90 TYR91 HIS92 TYR93 GLU94 ILE95 PRO96 ASN97 TYR98 GLY99 ASN100 ASP101 ILE102 SER103 LYS104 GLN105 LEU106 THR107 TRP108 THR109 PRO110 ASP111 VAL112 PHE113 LEU114 ASN115 ARG116 LYS117 PRO118 ILE119 LYS120 SER121 LYS122 LYS123 ASN124 SER125 ARG126 VAL127 PHE128 MET129 ALA130 TYR131 VAL132 LEU133 LEU134 ARG135 MET136 GLY137 ASP138 LEU139 MET140 ARG141 TYR142 LYS143 GLU144 ASN145 TYR146 PRO147 LYS148 ALA149 GLN150 GLU151 TYR152 TYR153 GLU154 GLN155 SER156 CYS157 ARG158 ILE159 ASN160 PRO161 ALA162 ASP163 GLY164 ALA165 VAL166 TRP167 ASN168 GLN169 LEU170 GLY171 LEU172 ILE173 SER174 SER175 LEU176 GLY177 ALA178 LYS179 ASN180 LEU181 GLU182 SER183 VAL184 TYR185 PHE186 HIS187 THR188 ARG189 ALA190 LEU191 HIS192 ALA193 THR194 MET195 GLU196 PHE197 PRO198 THR199 ALA200 SER201 GLY202 GLY203 LEU204 THR205 ASN206 ILE207 PHE208 LYS209 ASN210 PHE211 ALA212 ASN213 ARG214 ASP215 ILE216 SER217 ARG218 PRO219 MET220 PRO221 ILE222 LYS223 ASP224 LEU225 TYR226 LEU227 SER228 CYS229 LEU230 GLY231 ARG232 ILE233 HIS234 PHE235 LEU236 LEU237 GLU238 ILE239 GLU240 ASP241 SER242 SER243 VAL244 HIS245 LEU246 GLN247 LYS248 ILE249 GLY250 GLU251 GLU252 ALA253 ALA254 THR255 SER256 LYS257 GLU258 MET259 ILE260 VAL261 PRO262 LEU263 MET264 SER265 VAL266 TYR267 LYS268 HIS269 LEU270 GLU271 ASP272 GLY273 THR274 GLU275 LEU276 GLU277 GLN278 ARG279 ALA280 VAL281 GLU282 TYR283 VAL284 LYS285 THR286 ILE287 TRP288 CYS289 THR290 ALA291 TYR292 ARG293 SER294 LEU295 LEU296 LYS297 THR298 LEU299 ASP300 ASP301 TYR302 LYS303 GLU304 GLU305 SER306 LYS307 LYS308 LEU309 ALA310 ASP311 VAL312 PRO313 HIS314 LEU315 LEU316 HIS317 ILE318 LEU319 ALA320 LEU321 LEU322 LEU323 CYS324 ALA325 PRO326 LYS327 LEU328 LEU329 ARG330 GLY331 ILE332 GLU333 ASP334 GLN335 THR336 GLU337 ASP338 GLU339 VAL340 THR341 SER342 ILE343 CYS344 GLU345 TRP346 LEU347 LEU348 CYS349 ALA350 ASN351 CYS352 ASP353 GLU354 LYS355 ILE356 LYS357 ASP358 SER359 ASP360 ALA361 PHE362 GLY363 TYR364 PHE365 HIS366 CYS367 LEU368 GLN369 ARG370 ILE371 GLN372 TYR373 PRO374 LEU375 THR376 ARG377 THR378 GLN379 LEU380 ALA381 GLN382 LYS383 LEU384 VAL385 GLU386 ILE387 GLU388 ASP389 GLU390 ASP391
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany