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Sequence, Chains, Asymmetric and Biological Units

Title A NOVEL SMALL MOLECULE APKC INHIBITOR
Keywords TRANSFERASE, AGC KINASES, CELL POLARITY, CELL MIGRATION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3ZH8     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN KINASE C IOTA TYPE  A 320 2486 22
2  Protein   PROTEIN KINASE C IOTA TYPE  B 319 2530 22
3  Protein   PROTEIN KINASE C IOTA TYPE  C 314 2414 22
4  Ligand   PROTEIN KINASE C IOTA TYPE  A 9 0 90
5  Ligand   PROTEIN KINASE C IOTA TYPE  B 10 0 100
6  Ligand   PROTEIN KINASE C IOTA TYPE  C 9 0 90
7 Water     73 0 73
total       1054 7430 419
Proteins
Unit 1 SER239 LEU240 GLY241 LEU242 GLN243 ASP244 PHE245 ASP246 LEU247 LEU248 ARG249 VAL250 ILE251 GLY252 ARG253 GLY254 SER255 TYR256 ALA257 LYS258 VAL259 LEU260 LEU261 VAL262 ARG263 LEU264 LYS265 LYS266 THR267 ASP268 ARG269 ILE270 TYR271 ALA272 MET273 LYS274 VAL275 VAL276 LYS277 LYS278 GLU279 LEU280 VAL281 ASN282 ASP283 ASP284 GLU285 ASP286 ILE287 ASP288 TRP289 VAL290 GLN291 THR292 GLU293 LYS294 HIS295 VAL296 PHE297 GLU298 GLN299 ALA300 SER301 ASN302 HIS303 PRO304 PHE305 LEU306 VAL307 GLY308 LEU309 HIS310 SER311 CYS312 PHE313 GLN314 THR315 GLU316 SER317 ARG318 LEU319 PHE320 PHE321 VAL322 ILE323 GLU324 TYR325 VAL326 ASN327 GLY328 GLY329 ASP330 LEU331 MET332 PHE333 HIS334 MET335 GLN336 ARG337 GLN338 ARG339 LYS340 LEU341 PRO342 GLU343 GLU344 HIS345 ALA346 ARG347 PHE348 TYR349 SER350 ALA351 GLU352 ILE353 SER354 LEU355 ALA356 LEU357 ASN358 TYR359 LEU360 HIS361 GLU362 ARG363 GLY364 ILE365 ILE366 TYR367 ARG368 ASP369 LEU370 LYS371 LEU372 ASP373 ASN374 VAL375 LEU376 LEU377 ASP378 SER379 GLU380 GLY381 HIS382 ILE383 LYS384 LEU385 THR386 ASP387 TYR388 GLY389 MET390 CYS391 LYS392 GLU393 GLY394 LEU395 ARG396 PRO397 GLY398 ASP399 THR400 THR401 SER402 TPO403 PHE404 CYS405 GLY406 THR407 PRO408 ASN409 TYR410 ILE411 ALA412 PRO413 GLU414 ILE415 LEU416 ARG417 GLY418 GLU419 ASP420 TYR421 GLY422 PHE423 SER424 VAL425 ASP426 TRP427 TRP428 ALA429 LEU430 GLY431 VAL432 LEU433 MET434 PHE435 GLU436 MET437 MET438 ALA439 GLY440 ARG441 SER442 PRO443 PHE444 ASP445 ILE446 VAL447 ASN456 THR457 GLU458 ASP459 TYR460 LEU461 PHE462 GLN463 VAL464 ILE465 LEU466 GLU467 LYS468 GLN469 ILE470 ARG471 ILE472 PRO473 ARG474 SER475 LEU476 SER477 VAL478 LYS479 ALA480 ALA481 SER482 VAL483 LEU484 LYS485 SER486 PHE487 LEU488 ASN489 LYS490 ASP491 PRO492 LYS493 GLU494 ARG495 LEU496 GLY497 CYS498 HIS499 PRO500 GLN501 THR502 GLY503 PHE504 ALA505 ASP506 ILE507 GLN508 GLY509 HIS510 PRO511 PHE512 PHE513 ARG514 ASN515 VAL516 ASP517 TRP518 ASP519 MET520 MET521 GLU522 GLN523 LYS524 GLN525 VAL526 VAL527 PRO528 PRO529 PHE530 LYS531 PRO532 ASN533 ILE534 SER535 GLY536 GLU537 GLN553 LEU554 TPO555 PRO556 ASP557 ASP558 ASP559 ASP560 ILE561 VAL562 ARG563 LYS564 ILE565 ASP566 GLN567 SER568 GLU569 PHE570 GLU571 GLY572 PHE573 GLU574 TYR575 ILE576 ASN577 PRO578 LEU579 LEU580 MET581
Unit 2 SER239 LEU240 GLY241 LEU242 GLN243 ASP244 PHE245 ASP246 LEU247 LEU248 ARG249 VAL250 ILE251 GLY252 ARG253 GLY254 SER255 TYR256 ALA257 LYS258 VAL259 LEU260 LEU261 VAL262 ARG263 LEU264 LYS265 LYS266 THR267 ASP268 ARG269 ILE270 TYR271 ALA272 MET273 LYS274 VAL275 VAL276 LYS277 LYS278 GLU279 LEU280 VAL281 ASN282 ASP283 ASP284 GLU285 ASP286 ILE287 ASP288 TRP289 VAL290 GLN291 THR292 GLU293 LYS294 HIS295 VAL296 PHE297 GLU298 GLN299 ALA300 SER301 ASN302 HIS303 PRO304 PHE305 LEU306 VAL307 GLY308 LEU309 HIS310 SER311 CYS312 PHE313 GLN314 THR315 GLU316 SER317 ARG318 LEU319 PHE320 PHE321 VAL322 ILE323 GLU324 TYR325 VAL326 ASN327 GLY328 GLY329 ASP330 LEU331 MET332 PHE333 HIS334 MET335 GLN336 ARG337 GLN338 ARG339 LYS340 LEU341 PRO342 GLU343 GLU344 HIS345 ALA346 ARG347 PHE348 TYR349 SER350 ALA351 GLU352 ILE353 SER354 LEU355 ALA356 LEU357 ASN358 TYR359 LEU360 HIS361 GLU362 ARG363 GLY364 ILE365 ILE366 TYR367 ARG368 ASP369 LEU370 LYS371 LEU372 ASP373 ASN374 VAL375 LEU376 LEU377 ASP378 SER379 GLU380 GLY381 HIS382 ILE383 LYS384 LEU385 THR386 ASP387 TYR388 GLY389 MET390 CYS391 LYS392 GLU393 GLY394 LEU395 ARG396 PRO397 GLY398 ASP399 THR400 THR401 SER402 TPO403 PHE404 CYS405 GLY406 THR407 PRO408 ASN409 TYR410 ILE411 ALA412 PRO413 GLU414 ILE415 LEU416 ARG417 GLY418 GLU419 ASP420 TYR421 GLY422 PHE423 SER424 VAL425 ASP426 TRP427 TRP428 ALA429 LEU430 GLY431 VAL432 LEU433 MET434 PHE435 GLU436 MET437 MET438 ALA439 GLY440 ARG441 SER442 PRO443 PHE444 ASP445 ILE446 VAL447 ASN456 THR457 GLU458 ASP459 TYR460 LEU461 PHE462 GLN463 VAL464 ILE465 LEU466 GLU467 LYS468 GLN469 ILE470 ARG471 ILE472 PRO473 ARG474 SER475 LEU476 SER477 VAL478 LYS479 ALA480 ALA481 SER482 VAL483 LEU484 LYS485 SER486 PHE487 LEU488 ASN489 LYS490 ASP491 PRO492 LYS493 GLU494 ARG495 LEU496 GLY497 CYS498 HIS499 PRO500 GLN501 THR502 GLY503 PHE504 ALA505 ASP506 ILE507 GLN508 GLY509 HIS510 PRO511 PHE512 PHE513 ARG514 ASN515 VAL516 ASP517 TRP518 ASP519 MET520 MET521 GLU522 GLN523 LYS524 GLN525 VAL526 VAL527 PRO528 PRO529 PHE530 LYS531 PRO532 ASN533 ILE534 SER535 GLY536 GLU537 GLN553 LEU554 TPO555 PRO556 ASP557 ASP558 ASP559 ASP560 ILE561 VAL562 ARG563 LYS564 ILE565 ASP566 GLN567 SER568 GLU569 PHE570 GLU571 GLY572 PHE573 GLU574 TYR575 ILE576 ASN577 PRO578 LEU579 LEU580
Unit 3 SER239 LEU240 GLY241 LEU242 GLN243 ASP244 PHE245 ASP246 LEU247 LEU248 ARG249 VAL250 ILE251 GLY252 ARG253 GLY254 SER255 TYR256 ALA257 LYS258 VAL259 LEU260 LEU261 VAL262 ARG263 LEU264 LYS265 LYS266 THR267 ASP268 ARG269 ILE270 TYR271 ALA272 MET273 LYS274 VAL275 VAL276 LYS277 LYS278 GLU279 LEU280 VAL281 ASN282 ASP283 ASP284 GLU285 ASP286 ILE287 ASP288 TRP289 VAL290 GLN291 THR292 GLU293 LYS294 HIS295 VAL296 PHE297 GLU298 GLN299 ALA300 SER301 ASN302 HIS303 PRO304 PHE305 LEU306 VAL307 GLY308 LEU309 HIS310 SER311 CYS312 PHE313 GLN314 THR315 GLU316 SER317 ARG318 LEU319 PHE320 PHE321 VAL322 ILE323 GLU324 TYR325 VAL326 ASN327 GLY328 GLY329 ASP330 LEU331 MET332 PHE333 HIS334 MET335 GLN336 ARG337 GLN338 ARG339 LYS340 LEU341 PRO342 GLU343 GLU344 HIS345 ALA346 ARG347 PHE348 TYR349 SER350 ALA351 GLU352 ILE353 SER354 LEU355 ALA356 LEU357 ASN358 TYR359 LEU360 HIS361 GLU362 ARG363 GLY364 ILE365 ILE366 TYR367 ARG368 ASP369 LEU370 LYS371 LEU372 ASP373 ASN374 VAL375 LEU376 LEU377 ASP378 SER379 GLU380 GLY381 HIS382 ILE383 LYS384 LEU385 THR386 ASP387 TYR388 GLY389 MET390 CYS391 LYS392 GLU393 GLY394 LEU395 ARG396 PRO397 GLY398 ASP399 THR400 THR401 SER402 TPO403 PHE404 CYS405 GLY406 THR407 PRO408 ASN409 TYR410 ILE411 ALA412 PRO413 GLU414 ILE415 LEU416 ARG417 GLY418 GLU419 ASP420 TYR421 GLY422 PHE423 SER424 VAL425 ASP426 TRP427 TRP428 ALA429 LEU430 GLY431 VAL432 LEU433 MET434 PHE435 GLU436 MET437 MET438 ALA439 GLY440 ARG441 SER442 PRO443 PHE444 ASP445 ILE446 VAL447 ASN456 THR457 GLU458 ASP459 TYR460 LEU461 PHE462 GLN463 VAL464 ILE465 LEU466 GLU467 LYS468 GLN469 ILE470 ARG471 ILE472 PRO473 ARG474 SER475 LEU476 SER477 VAL478 LYS479 ALA480 ALA481 SER482 VAL483 LEU484 LYS485 SER486 PHE487 LEU488 ASN489 LYS490 ASP491 PRO492 LYS493 GLU494 ARG495 LEU496 GLY497 CYS498 HIS499 PRO500 GLN501 THR502 GLY503 PHE504 ALA505 ASP506 ILE507 GLN508 GLY509 HIS510 PRO511 PHE512 PHE513 ARG514 ASN515 VAL516 ASP517 TRP518 ASP519 MET520 MET521 GLU522 GLN523 LYS524 GLN525 VAL526 VAL527 PRO528 PRO529 PHE530 LYS531 PRO532 ASN533 GLN553 LEU554 TPO555 PRO556 ASP557 ASP558 ASP559 ASP560 ILE561 VAL562 ARG563 LYS564 ILE565 ASP566 GLN567 SER568 GLU569 PHE570 GLU571 GLY572 PHE573 GLU574 TYR575 ILE576 ASN577 PRO578 LEU579
Ligands
Unit 4 IOD901 IOD902 IOD903 IOD904 CL912 C581582 EDO1583 EDO1584 EDO1585
Unit 5 IOD901 IOD902 IOD903 IOD904 CL912 C581581 EDO1582 EDO1583 EDO1584 EDO1585
Unit 6 IOD901 IOD902 IOD903 IOD904 CL912 C581580 EDO1581 EDO1582 EDO1583
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany