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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF PLASMODIUM FALCIPARUM LACTATE DEHYDROGENASE IN COMPLEX WITH A DNA APTAMER
Keywords OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3ZH2     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE  A 314 2379 0
2  Protein   L-LACTATE DEHYDROGENASE  B 308 2336 0
3  Protein   L-LACTATE DEHYDROGENASE  C 315 2380 0
4  Protein   L-LACTATE DEHYDROGENASE  D 311 2360 0
5  Other macromolecule   DNA APTAMER  E 27 559 0
6  Other macromolecule   DNA APTAMER  G 27 559 0
7 Water     644 0 644
total       1946 10573 644
Proteins
Unit 1 PRO3 LYS4 ALA5 LYS6 ILE7 VAL8 LEU9 VAL10 GLY11 SER12 GLY13 MET14 ILE15 GLY16 GLY17 VAL18 MET19 ALA20 THR21 LEU22 ILE23 VAL24 GLN25 LYS26 ASN27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 LYS38 ASN39 MET40 PRO41 HIS42 GLY43 LYS44 ALA45 LEU46 ASP47 THR48 SER49 HIS50 THR51 ASN52 VAL53 MET54 ALA55 TYR56 SER57 ASN58 CYS59 LYS60 VAL61 SER62 GLY63 SER64 ASN65 THR66 TYR67 ASP68 ASP69 LEU70 ALA71 GLY72 ALA73 ASP74 VAL75 VAL76 ILE77 VAL78 THR79 ALA80 GLY81 PHE82 THR83 LYS84 ALA85 PRO86 GLY87 LYS88 SER89 ASP90 LYS91 GLU92 TRP93 ASN94 ARG95 ASP96 ASP97 LEU98 LEU99 PRO100 LEU101 ASN102 ASN103 LYS104 ILE105 MET106 ILE107 GLU108 ILE109 GLY110 GLY111 HIS112 ILE113 LYS114 LYS115 ASN116 CYS117 PRO118 ASN119 ALA120 PHE121 ILE122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 VAL129 ASP130 VAL131 MET132 VAL133 GLN134 LEU135 LEU136 HIS137 GLN138 HIS139 SER140 GLY141 VAL142 PRO143 LYS144 ASN145 LYS146 ILE147 ILE148 GLY149 LEU150 GLY151 GLY152 VAL153 LEU154 ASP155 THR156 SER157 ARG158 LEU159 LYS160 TYR161 TYR162 ILE163 SER164 GLN165 LYS166 LEU167 ASN168 VAL169 CYS170 PRO171 ARG172 ASP173 VAL174 ASN175 ALA176 HIS177 ILE178 VAL179 GLY180 ALA181 HIS182 GLY183 ASN184 LYS185 MET186 VAL187 LEU188 LEU189 LYS190 ARG191 TYR192 ILE193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 GLN201 GLU202 PHE203 ILE204 ASN205 ASN206 LYS207 LEU208 ILE209 SER210 ASP211 ALA212 GLU213 LEU214 GLU215 ALA216 ILE217 PHE218 ASP219 ARG220 THR221 VAL222 ASN223 THR224 ALA225 LEU226 GLU227 ILE228 VAL229 ASN230 LEU231 HIS232 ALA233 SER234 PRO235 TYR236 VAL237 ALA238 PRO239 ALA240 ALA241 ALA242 ILE243 ILE244 GLU245 MET246 ALA247 GLU248 SER249 TYR250 LEU251 LYS252 ASP253 LEU254 LYS255 LYS256 VAL257 LEU258 ILE259 CYS260 SER261 THR262 LEU263 LEU264 GLU265 GLY266 GLN267 TYR268 GLY269 HIS270 SER271 ASP272 ILE273 PHE274 GLY275 GLY276 THR277 PRO278 VAL279 VAL280 LEU281 GLY282 ALA283 ASN284 GLY285 VAL286 GLU287 GLN288 VAL289 ILE290 GLU291 LEU292 GLN293 LEU294 ASN295 SER296 GLU297 GLU298 LYS299 ALA300 LYS301 PHE302 ASP303 GLU304 ALA305 ILE306 ALA307 GLU308 THR309 LYS310 ARG311 MET312 LYS313 ALA314 LEU315 ALA316
Unit 2 PRO3 LYS4 ALA5 LYS6 ILE7 VAL8 LEU9 VAL10 GLY11 SER12 GLY13 MET14 ILE15 GLY16 GLY17 VAL18 MET19 ALA20 THR21 LEU22 ILE23 VAL24 GLN25 LYS26 ASN27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 LYS38 ASN39 MET40 PRO41 HIS42 GLY43 LYS44 ALA45 LEU46 ASP47 THR48 SER49 HIS50 THR51 ASN52 VAL53 MET54 ALA55 TYR56 SER57 ASN58 CYS59 LYS60 VAL61 SER62 GLY63 SER64 ASN65 THR66 TYR67 ASP68 ASP69 LEU70 ALA71 GLY72 ALA73 ASP74 VAL75 VAL76 ILE77 VAL78 THR79 ALA80 GLY81 PHE82 THR83 LYS84 ALA85 GLU92 TRP93 ASN94 ARG95 ASP96 ASP97 LEU98 LEU99 PRO100 LEU101 ASN102 ASN103 LYS104 ILE105 MET106 ILE107 GLU108 ILE109 GLY110 GLY111 HIS112 ILE113 LYS114 LYS115 ASN116 CYS117 PRO118 ASN119 ALA120 PHE121 ILE122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 VAL129 ASP130 VAL131 MET132 VAL133 GLN134 LEU135 LEU136 HIS137 GLN138 HIS139 SER140 GLY141 VAL142 PRO143 LYS144 ASN145 LYS146 ILE147 ILE148 GLY149 LEU150 GLY151 GLY152 VAL153 LEU154 ASP155 THR156 SER157 ARG158 LEU159 LYS160 TYR161 TYR162 ILE163 SER164 GLN165 LYS166 LEU167 ASN168 VAL169 CYS170 PRO171 ARG172 ASP173 VAL174 ASN175 ALA176 HIS177 ILE178 VAL179 GLY180 ALA181 HIS182 GLY183 ASN184 LYS185 MET186 VAL187 LEU188 LEU189 LYS190 ARG191 TYR192 ILE193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 GLN201 GLU202 PHE203 ILE204 ASN205 ASN206 LYS207 LEU208 ILE209 SER210 ASP211 ALA212 GLU213 LEU214 GLU215 ALA216 ILE217 PHE218 ASP219 ARG220 THR221 VAL222 ASN223 THR224 ALA225 LEU226 GLU227 ILE228 VAL229 ASN230 LEU231 HIS232 ALA233 SER234 PRO235 TYR236 VAL237 ALA238 PRO239 ALA240 ALA241 ALA242 ILE243 ILE244 GLU245 MET246 ALA247 GLU248 SER249 TYR250 LEU251 LYS252 ASP253 LEU254 LYS255 LYS256 VAL257 LEU258 ILE259 CYS260 SER261 THR262 LEU263 LEU264 GLU265 GLY266 GLN267 TYR268 GLY269 HIS270 SER271 ASP272 ILE273 PHE274 GLY275 GLY276 THR277 PRO278 VAL279 VAL280 LEU281 GLY282 ALA283 ASN284 GLY285 VAL286 GLU287 GLN288 VAL289 ILE290 GLU291 LEU292 GLN293 LEU294 ASN295 SER296 GLU297 GLU298 LYS299 ALA300 LYS301 PHE302 ASP303 GLU304 ALA305 ILE306 ALA307 GLU308 THR309 LYS310 ARG311 MET312 LYS313 ALA314 LEU315 ALA316
Unit 3 ALA2 PRO3 LYS4 ALA5 LYS6 ILE7 VAL8 LEU9 VAL10 GLY11 SER12 GLY13 MET14 ILE15 GLY16 GLY17 VAL18 MET19 ALA20 THR21 LEU22 ILE23 VAL24 GLN25 LYS26 ASN27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 LYS38 ASN39 MET40 PRO41 HIS42 GLY43 LYS44 ALA45 LEU46 ASP47 THR48 SER49 HIS50 THR51 ASN52 VAL53 MET54 ALA55 TYR56 SER57 ASN58 CYS59 LYS60 VAL61 SER62 GLY63 SER64 ASN65 THR66 TYR67 ASP68 ASP69 LEU70 ALA71 GLY72 ALA73 ASP74 VAL75 VAL76 ILE77 VAL78 THR79 ALA80 GLY81 PHE82 THR83 LYS84 ALA85 PRO86 GLY87 LYS88 SER89 ASP90 LYS91 GLU92 TRP93 ASN94 ARG95 ASP96 ASP97 LEU98 LEU99 PRO100 LEU101 ASN102 ASN103 LYS104 ILE105 MET106 ILE107 GLU108 ILE109 GLY110 GLY111 HIS112 ILE113 LYS114 LYS115 ASN116 CYS117 PRO118 ASN119 ALA120 PHE121 ILE122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 VAL129 ASP130 VAL131 MET132 VAL133 GLN134 LEU135 LEU136 HIS137 GLN138 HIS139 SER140 GLY141 VAL142 PRO143 LYS144 ASN145 LYS146 ILE147 ILE148 GLY149 LEU150 GLY151 GLY152 VAL153 LEU154 ASP155 THR156 SER157 ARG158 LEU159 LYS160 TYR161 TYR162 ILE163 SER164 GLN165 LYS166 LEU167 ASN168 VAL169 CYS170 PRO171 ARG172 ASP173 VAL174 ASN175 ALA176 HIS177 ILE178 VAL179 GLY180 ALA181 HIS182 GLY183 ASN184 LYS185 MET186 VAL187 LEU188 LEU189 LYS190 ARG191 TYR192 ILE193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 GLN201 GLU202 PHE203 ILE204 ASN205 ASN206 LYS207 LEU208 ILE209 SER210 ASP211 ALA212 GLU213 LEU214 GLU215 ALA216 ILE217 PHE218 ASP219 ARG220 THR221 VAL222 ASN223 THR224 ALA225 LEU226 GLU227 ILE228 VAL229 ASN230 LEU231 HIS232 ALA233 SER234 PRO235 TYR236 VAL237 ALA238 PRO239 ALA240 ALA241 ALA242 ILE243 ILE244 GLU245 MET246 ALA247 GLU248 SER249 TYR250 LEU251 LYS252 ASP253 LEU254 LYS255 LYS256 VAL257 LEU258 ILE259 CYS260 SER261 THR262 LEU263 LEU264 GLU265 GLY266 GLN267 TYR268 GLY269 HIS270 SER271 ASP272 ILE273 PHE274 GLY275 GLY276 THR277 PRO278 VAL279 VAL280 LEU281 GLY282 ALA283 ASN284 GLY285 VAL286 GLU287 GLN288 VAL289 ILE290 GLU291 LEU292 GLN293 LEU294 ASN295 SER296 GLU297 GLU298 LYS299 ALA300 LYS301 PHE302 ASP303 GLU304 ALA305 ILE306 ALA307 GLU308 THR309 LYS310 ARG311 MET312 LYS313 ALA314 LEU315 ALA316
Unit 4 PRO3 LYS4 ALA5 LYS6 ILE7 VAL8 LEU9 VAL10 GLY11 SER12 GLY13 MET14 ILE15 GLY16 GLY17 VAL18 MET19 ALA20 THR21 LEU22 ILE23 VAL24 GLN25 LYS26 ASN27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 LYS38 ASN39 MET40 PRO41 HIS42 GLY43 LYS44 ALA45 LEU46 ASP47 THR48 SER49 HIS50 THR51 ASN52 VAL53 MET54 ALA55 TYR56 SER57 ASN58 CYS59 LYS60 VAL61 SER62 GLY63 SER64 ASN65 THR66 TYR67 ASP68 ASP69 LEU70 ALA71 GLY72 ALA73 ASP74 VAL75 VAL76 ILE77 VAL78 THR79 ALA80 GLY81 PHE82 THR83 LYS84 ALA85 PRO86 ASP90 LYS91 GLU92 TRP93 ASN94 ARG95 ASP96 ASP97 LEU98 LEU99 PRO100 LEU101 ASN102 ASN103 LYS104 ILE105 MET106 ILE107 GLU108 ILE109 GLY110 GLY111 HIS112 ILE113 LYS114 LYS115 ASN116 CYS117 PRO118 ASN119 ALA120 PHE121 ILE122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 VAL129 ASP130 VAL131 MET132 VAL133 GLN134 LEU135 LEU136 HIS137 GLN138 HIS139 SER140 GLY141 VAL142 PRO143 LYS144 ASN145 LYS146 ILE147 ILE148 GLY149 LEU150 GLY151 GLY152 VAL153 LEU154 ASP155 THR156 SER157 ARG158 LEU159 LYS160 TYR161 TYR162 ILE163 SER164 GLN165 LYS166 LEU167 ASN168 VAL169 CYS170 PRO171 ARG172 ASP173 VAL174 ASN175 ALA176 HIS177 ILE178 VAL179 GLY180 ALA181 HIS182 GLY183 ASN184 LYS185 MET186 VAL187 LEU188 LEU189 LYS190 ARG191 TYR192 ILE193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 GLN201 GLU202 PHE203 ILE204 ASN205 ASN206 LYS207 LEU208 ILE209 SER210 ASP211 ALA212 GLU213 LEU214 GLU215 ALA216 ILE217 PHE218 ASP219 ARG220 THR221 VAL222 ASN223 THR224 ALA225 LEU226 GLU227 ILE228 VAL229 ASN230 LEU231 HIS232 ALA233 SER234 PRO235 TYR236 VAL237 ALA238 PRO239 ALA240 ALA241 ALA242 ILE243 ILE244 GLU245 MET246 ALA247 GLU248 SER249 TYR250 LEU251 LYS252 ASP253 LEU254 LYS255 LYS256 VAL257 LEU258 ILE259 CYS260 SER261 THR262 LEU263 LEU264 GLU265 GLY266 GLN267 TYR268 GLY269 HIS270 SER271 ASP272 ILE273 PHE274 GLY275 GLY276 THR277 PRO278 VAL279 VAL280 LEU281 GLY282 ALA283 ASN284 GLY285 VAL286 GLU287 GLN288 VAL289 ILE290 GLU291 LEU292 GLN293 LEU294 ASN295 SER296 GLU297 GLU298 LYS299 ALA300 LYS301 PHE302 ASP303 GLU304 ALA305 ILE306 ALA307 GLU308 THR309 LYS310 ARG311 MET312 LYS313 ALA314 LEU315 ALA316
Other macromolecules
Unit 5 DC1 DT2 DG3 DG4 DG5 DC6 DG7 DG8 DT9 DA10 DG11 DA12 DA13 DC14 DC15 DA16 DT17 DA18 DG19 DT20 DG21 DA22 DC23 DC24 DC25 DA26 DG27
Unit 6 DC1 DT2 DG3 DG4 DG5 DC6 DG7 DG8 DT9 DA10 DG11 DA12 DA13 DC14 DC15 DA16 DT17 DA18 DG19 DT20 DG21 DA22 DC23 DC24 DC25 DA26 DG27
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany