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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE COMPLEX COMPRISED OF ETS1 (V170A), CBFBETA, AND THE TCRALPHA GENE ENHANCER DNA
Keywords PROTEIN-DNA COMPLEX, TRANSCRIPTION, DNA-BINDING, METHYLATION NUCLEUS, PHOSPHOPROTEIN, TRANSCRIPTION REGULATION, ISOPEPTI PROTO-ONCOGENE, TRANSCRIPTION-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3WTU     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RUNT-RELATED TRANSCRIPTION FACTOR 1  A 118 912 0
2  Protein   CORE-BINDING FACTOR SUBUNIT BETA  B 130 1071 0
3  Protein   PROTEIN C-ETS-1  C 118 967 0
4  Protein   RUNT-RELATED TRANSCRIPTION FACTOR 1  F 118 912 0
5  Protein   CORE-BINDING FACTOR SUBUNIT BETA  G 129 1062 0
6  Protein   PROTEIN C-ETS-1  H 101 853 0
7  Other macromolecule   DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP 3')  D 15 299 0
8  Other macromolecule   DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP 3')  E 15 310 0
9  Other macromolecule   DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP 3')  I 15 299 0
10  Other macromolecule   DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP 3')  J 15 310 0
11 Water     34 0 35
total       808 6995 35

Proteins
Unit 1 GLY60 GLU61 LEU62 VAL63 ARG64 THR65 ASP66 SER67 PRO68 ASN69 PHE70 LEU71 CYS72 SER73 VAL74 LEU75 PRO76 THR77 HIS78 TRP79 ARG80 CYS81 ASN82 LYS83 THR84 LEU85 PRO86 ILE87 ALA88 PHE89 LYS90 VAL91 VAL92 ALA93 LYS94 GLY95 ASP96 VAL97 PRO98 ASP99 GLY100 THR101 LEU102 VAL103 THR104 VAL105 MET106 ALA107 GLY108 ASN109 ASP110 GLU111 ASN112 TYR113 SER114 ALA115 GLU116 LEU117 ARG118 ASN119 ALA120 THR121 ALA122 ALA123 MET124 LYS125 ASN126 GLN127 VAL128 ALA129 ARG130 PHE131 ASN132 ASP133 LEU134 ARG135 PHE136 VAL137 GLY138 ARG139 SER140 GLY141 ARG142 GLY143 LYS144 SER145 PHE146 THR147 LEU148 THR149 ILE150 THR151 VAL152 PHE153 THR154 ASN155 PRO156 PRO157 GLN158 VAL159 ALA160 THR161 TYR162 HIS163 ARG164 ALA165 ILE166 LYS167 ILE168 THR169 ALA170 ASP171 GLY172 PRO173 ARG174 GLU175 PRO176 ARG177
Unit 2 PRO2 ARG3 VAL4 VAL5 PRO6 ASP7 GLN8 ARG9 SER10 LYS11 PHE12 GLU13 ASN14 GLU15 GLU16 PHE17 PHE18 ARG19 LYS20 LEU21 SER22 ARG23 GLU24 CYS25 GLU26 ILE27 LYS28 TYR29 THR30 GLY31 PHE32 ARG33 ASP34 ARG35 PRO36 HIS37 GLU38 GLU39 ARG40 GLN41 THR42 ARG43 PHE44 GLN45 ASN46 ALA47 CYS48 ARG49 ASP50 GLY51 ARG52 SER53 GLU54 ILE55 ALA56 PHE57 VAL58 ALA59 THR60 GLY61 THR62 ASN63 LEU64 SER65 LEU66 GLN67 PHE68 PHE69 PRO70 ALA71 PRO81 SER82 ARG83 GLU84 TYR85 VAL86 ASP87 LEU88 GLU89 ARG90 GLU91 ALA92 GLY93 LYS94 VAL95 TYR96 LEU97 LYS98 ALA99 PRO100 MET101 ILE102 LEU103 ASN104 GLY105 VAL106 CYS107 VAL108 ILE109 TRP110 LYS111 GLY112 TRP113 ILE114 ASP115 LEU116 HIS117 ARG118 LEU119 ASP120 GLY121 MET122 GLY123 CYS124 LEU125 GLU126 PHE127 ASP128 GLU129 GLU130 ARG131 ALA132 GLN133 GLN134 GLU135 ASP136 ALA137 LEU138 ALA139 GLN140
Unit 3 PRO319 VAL320 ILE321 PRO322 ALA323 ALA324 ALA325 LEU326 ALA327 GLY328 TYR329 THR330 GLY331 SER332 GLY333 PRO334 ILE335 GLN336 LEU337 TRP338 GLN339 PHE340 LEU341 LEU342 GLU343 LEU344 LEU345 THR346 ASP347 LYS348 SER349 CYS350 GLN351 SER352 PHE353 ILE354 SER355 TRP356 THR357 GLY358 ASP359 GLY360 TRP361 GLU362 PHE363 LYS364 LEU365 SER366 ASP367 PRO368 ASP369 GLU370 VAL371 ALA372 ARG373 ARG374 TRP375 GLY376 LYS377 ARG378 LYS379 ASN380 LYS381 PRO382 LYS383 MET384 ASN385 TYR386 GLU387 LYS388 LEU389 SER390 ARG391 GLY392 LEU393 ARG394 TYR395 TYR396 TYR397 ASP398 LYS399 ASN400 ILE401 ILE402 HIS403 LYS404 THR405 ALA406 GLY407 LYS408 ARG409 TYR410 VAL411 TYR412 ARG413 PHE414 VAL415 CYS416 ASP417 LEU418 GLN419 SER420 LEU421 LEU422 GLY423 TYR424 THR425 PRO426 GLU427 GLU428 LEU429 HIS430 ALA431 MET432 LEU433 ASP434 VAL435 LYS436
Unit 4 GLY60 GLU61 LEU62 VAL63 ARG64 THR65 ASP66 SER67 PRO68 ASN69 PHE70 LEU71 CYS72 SER73 VAL74 LEU75 PRO76 THR77 HIS78 TRP79 ARG80 CYS81 ASN82 LYS83 THR84 LEU85 PRO86 ILE87 ALA88 PHE89 LYS90 VAL91 VAL92 ALA93 LYS94 GLY95 ASP96 VAL97 PRO98 ASP99 GLY100 THR101 LEU102 VAL103 THR104 VAL105 MET106 ALA107 GLY108 ASN109 ASP110 GLU111 ASN112 TYR113 SER114 ALA115 GLU116 LEU117 ARG118 ASN119 ALA120 THR121 ALA122 ALA123 MET124 LYS125 ASN126 GLN127 VAL128 ALA129 ARG130 PHE131 ASN132 ASP133 LEU134 ARG135 PHE136 VAL137 GLY138 ARG139 SER140 GLY141 ARG142 GLY143 LYS144 SER145 PHE146 THR147 LEU148 THR149 ILE150 THR151 VAL152 PHE153 THR154 ASN155 PRO156 PRO157 GLN158 VAL159 ALA160 THR161 TYR162 HIS163 ARG164 ALA165 ILE166 LYS167 ILE168 THR169 ALA170 ASP171 GLY172 PRO173 ARG174 GLU175 PRO176 ARG177
Unit 5 PRO2 ARG3 VAL4 VAL5 PRO6 ASP7 GLN8 ARG9 SER10 LYS11 PHE12 GLU13 ASN14 GLU15 GLU16 PHE17 PHE18 ARG19 LYS20 LEU21 SER22 ARG23 GLU24 CYS25 GLU26 ILE27 LYS28 TYR29 THR30 GLY31 PHE32 ARG33 ASP34 ARG35 PRO36 HIS37 GLU38 GLU39 ARG40 GLN41 THR42 ARG43 PHE44 GLN45 ASN46 ALA47 CYS48 ARG49 ASP50 GLY51 ARG52 SER53 GLU54 ILE55 ALA56 PHE57 VAL58 ALA59 THR60 GLY61 THR62 ASN63 LEU64 SER65 LEU66 GLN67 PHE68 PHE69 PRO70 ALA71 PRO81 SER82 ARG83 GLU84 TYR85 VAL86 ASP87 LEU88 GLU89 ARG90 GLU91 ALA92 GLY93 LYS94 VAL95 TYR96 LEU97 LYS98 ALA99 PRO100 MET101 ILE102 LEU103 ASN104 GLY105 VAL106 CYS107 VAL108 ILE109 TRP110 LYS111 GLY112 TRP113 ILE114 ASP115 LEU116 HIS117 ARG118 LEU119 ASP120 GLY121 MET122 GLY123 CYS124 LEU125 GLU126 PHE127 ASP128 GLU129 GLU130 ARG131 ALA132 GLN133 GLN134 GLU135 ASP136 ALA137 LEU138 ALA139
Unit 6 GLY333 PRO334 ILE335 GLN336 LEU337 TRP338 GLN339 PHE340 LEU341 LEU342 GLU343 LEU344 LEU345 THR346 ASP347 LYS348 SER349 CYS350 GLN351 SER352 PHE353 ILE354 SER355 TRP356 THR357 GLY358 ASP359 GLY360 TRP361 GLU362 PHE363 LYS364 LEU365 SER366 ASP367 PRO368 ASP369 GLU370 VAL371 ALA372 ARG373 ARG374 TRP375 GLY376 LYS377 ARG378 LYS379 ASN380 LYS381 PRO382 LYS383 MET384 ASN385 TYR386 GLU387 LYS388 LEU389 SER390 ARG391 GLY392 LEU393 ARG394 TYR395 TYR396 TYR397 ASP398 LYS399 ASN400 ILE401 ILE402 HIS403 LYS404 THR405 ALA406 GLY407 LYS408 ARG409 TYR410 VAL411 TYR412 ARG413 PHE414 VAL415 CYS416 ASP417 LEU418 GLN419 SER420 LEU421 LEU422 GLY423 TYR424 THR425 PRO426 GLU427 GLU428 LEU429 HIS430 ALA431 MET432 LEU433

Other macromolecules
Unit 7 DG1 DA2 DA3 DG4 DC5 DC6 DA7 DC8 DA9 DT10 DC11 DC12 DT13 DC14 DT15
Unit 8 DA1 DG2 DA3 DG4 DG5 DA6 DT7 DG8 DT9 DG10 DG11 DC12 DT13 DT14 DC15
Unit 9 DG1 DA2 DA3 DG4 DC5 DC6 DA7 DC8 DA9 DT10 DC11 DC12 DT13 DC14 DT15
Unit 10 DA1 DG2 DA3 DG4 DG5 DA6 DT7 DG8 DT9 DG10 DG11 DC12 DT13 DT14 DC15

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany