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Title | CRYSTAL STRUCTURE OF CLEC-2 IN COMPLEX WITH O-GLYCOSYLATED P | |
Keywords | C-TYPE LECTIN FOLD, CELL SURFACE RECEPTOR, PODOPLANIN, O- GLYCOSYLATED, EXTRACELLULAR REGION, SUGAR BINDING PROTEIN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3WSR | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | C-TYPE LECTIN DOMAIN FAMILY 1 MEMBER B | A | 120 | 1012 | 0 |
2 | Protein | C-TYPE LECTIN DOMAIN FAMILY 1 MEMBER B | B | 120 | 1012 | 0 |
3 | Protein | PEPTIDE FROM PODOPLANIN | C | 10 | 69 | 0 |
4 | Protein | PEPTIDE FROM PODOPLANIN | D | 11 | 73 | 0 |
5 | Ligand | E | 3 | 0 | 45 | |
6 | Ligand | F | 3 | 0 | 45 | |
7 | Water | 35 | 0 | 36 | ||
total | 302 | 2166 | 126 |
Unit 1 | PRO101 CYS102 ASP103 THR104 ASN105 TRP106 ARG107 TYR108 TYR109 GLY110 ASP111 SER112 CYS113 TYR114 GLY115 PHE116 PHE117 ARG118 HIS119 ASN120 LEU121 THR122 TRP123 GLU124 GLU125 SER126 LYS127 GLN128 TYR129 CYS130 THR131 ASP132 MET133 ASN134 ALA135 THR136 LEU137 LEU138 LYS139 ILE140 ASP141 ASN142 ARG143 ASN144 ILE145 VAL146 GLU147 TYR148 ILE149 LYS150 ALA151 ARG152 THR153 HIS154 LEU155 ILE156 ARG157 TRP158 VAL159 GLY160 LEU161 SER162 ARG163 GLN164 LYS165 SER166 ASN167 GLU168 VAL169 TRP170 LYS171 TRP172 GLU173 ASP174 GLY175 SER176 VAL177 ILE178 SER179 GLU180 ASN181 MET182 PHE183 GLU184 PHE185 LEU186 GLU187 ASP188 GLY189 LYS190 GLY191 ASN192 MET193 ASN194 CYS195 ALA196 TYR197 PHE198 HIS199 ASN200 GLY201 LYS202 MET203 HIS204 PRO205 THR206 PHE207 CYS208 GLU209 ASN210 LYS211 HIS212 TYR213 LEU214 MET215 CYS216 GLU217 ARG218 LYS219 ALA220 |
Unit 2 | PRO101 CYS102 ASP103 THR104 ASN105 TRP106 ARG107 TYR108 TYR109 GLY110 ASP111 SER112 CYS113 TYR114 GLY115 PHE116 PHE117 ARG118 HIS119 ASN120 LEU121 THR122 TRP123 GLU124 GLU125 SER126 LYS127 GLN128 TYR129 CYS130 THR131 ASP132 MET133 ASN134 ALA135 THR136 LEU137 LEU138 LYS139 ILE140 ASP141 ASN142 ARG143 ASN144 ILE145 VAL146 GLU147 TYR148 ILE149 LYS150 ALA151 ARG152 THR153 HIS154 LEU155 ILE156 ARG157 TRP158 VAL159 GLY160 LEU161 SER162 ARG163 GLN164 LYS165 SER166 ASN167 GLU168 VAL169 TRP170 LYS171 TRP172 GLU173 ASP174 GLY175 SER176 VAL177 ILE178 SER179 GLU180 ASN181 MET182 PHE183 GLU184 PHE185 LEU186 GLU187 ASP188 GLY189 LYS190 GLY191 ASN192 MET193 ASN194 CYS195 ALA196 TYR197 PHE198 HIS199 ASN200 GLY201 LYS202 MET203 HIS204 PRO205 THR206 PHE207 CYS208 GLU209 ASN210 LYS211 HIS212 TYR213 LEU214 MET215 CYS216 GLU217 ARG218 LYS219 ALA220 |
Unit 3 | ALA46 GLU47 ASP48 ASP49 VAL50 VAL51 THR52 PRO53 GLY54 CYS55 |
Unit 4 | GLY45 ALA46 GLU47 ASP48 ASP49 VAL50 VAL51 THR52 PRO53 GLY54 CYS55 |
Unit 5 | A2G1 GAL2 SIA3 |
Unit 6 | A2G1 GAL2 SIA3 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |