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Title | CRYSTAL STRUCTURE OF DESB FROM SPHINGOBIUM SP. STRAIN SYK-6 | |
Keywords | OXIDOREDUCTASE, EXTRADIOL DIOXYGENASE, FE2+ BINDING, DOMAIN- DIMER | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3WR8 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | GALLATE DIOXYGENASE | A | 408 | 3238 | 0 |
2 | Protein | GALLATE DIOXYGENASE | B | 405 | 3220 | 0 |
3 | Ligand | GALLATE DIOXYGENASE | A | 1 | 0 | 1 |
4 | Ligand | GALLATE DIOXYGENASE | B | 1 | 0 | 1 |
5 | Water | 282 | 0 | 282 | ||
total | 1097 | 6458 | 284 |
Unit 1 | ALA2 LYS3 ILE4 ILE5 GLY6 GLY7 PHE8 ALA9 VAL10 SER11 HIS12 THR13 PRO14 THR15 ILE16 ALA17 PHE18 ALA19 HIS20 ASP21 ALA22 ASN23 LYS24 TYR25 ASP26 ASP27 PRO28 VAL29 TRP30 ALA31 PRO32 ILE33 PHE34 GLN35 GLY36 PHE37 GLU38 PRO39 VAL40 LYS41 GLN42 TRP43 LEU44 ALA45 GLU46 GLN47 LYS48 PRO49 ASP50 VAL51 THR52 PHE53 TYR54 VAL55 TYR56 ASN57 ASP58 HIS59 MET60 THR61 SER62 PHE63 PHE64 GLU65 HIS66 TYR67 SER68 HIS69 PHE70 ALA71 LEU72 GLY73 VAL74 GLY75 GLU76 GLU77 TYR78 SER79 PRO80 ALA81 ASP82 GLU83 GLY84 GLY85 GLY86 GLN87 ARG88 ASP89 LEU90 PRO91 PRO92 ILE93 LYS94 GLY95 ASP96 PRO97 GLU98 LEU99 ALA100 LYS101 HIS102 ILE103 ALA104 GLU105 CYS106 LEU107 VAL108 ALA109 ASP110 GLU111 PHE112 ASP113 LEU114 ALA115 TYR116 TRP117 GLN118 GLY119 MET120 GLY121 LEU122 ASP123 HIS124 GLY125 ALA126 PHE127 SER128 PRO129 LEU130 SER131 VAL132 LEU133 LEU134 PRO135 HIS136 GLU137 HIS138 GLY139 TRP140 PRO141 CYS142 ARG143 ILE144 VAL145 PRO146 LEU147 GLN148 CYS149 GLY150 VAL151 LEU152 GLN153 HIS154 PRO155 ILE156 PRO157 LYS158 ALA159 ARG160 ARG161 PHE162 TRP163 ASN164 PHE165 GLY166 ARG167 SER168 LEU169 ARG170 ARG171 ALA172 ILE173 GLN174 SER175 TYR176 PRO177 ARG178 ASP179 ILE180 LYS181 VAL182 ALA183 ILE184 ALA185 GLY186 THR187 GLY188 GLY189 LEU190 SER191 HIS192 GLN193 VAL194 HIS195 GLY196 GLU197 ARG198 ALA199 GLY200 PHE201 ASN202 ASN203 THR204 GLU205 TRP206 ASP207 MET208 GLU209 PHE210 MET211 GLU212 ARG213 LEU214 ALA215 ASN216 ASP217 PRO218 GLU219 SER220 LEU221 LEU222 GLY223 ALA224 THR225 VAL226 THR227 ASP228 LEU229 ALA230 LYS231 LYS232 GLY233 GLY234 TRP235 GLU236 GLY237 ALA238 GLU239 VAL240 VAL241 MET242 TRP243 LEU244 LEU245 MET246 ARG247 GLY248 ALA249 LEU250 SER251 PRO252 GLU253 VAL254 LYS255 THR256 LEU257 HIS258 GLN259 SER260 TYR261 PHE262 LEU263 PRO264 SER265 MET266 THR267 ALA268 ILE269 ALA270 THR271 MET272 LEU273 PHE274 GLU275 ASP276 GLN277 GLY278 ASP279 ALA280 ALA281 PRO282 PRO283 ALA284 GLU285 SER286 ASP287 GLU288 ALA289 LEU290 ARG291 ALA292 ARG293 ALA294 LYS295 ARG296 GLU297 LEU298 ALA299 GLY300 VAL301 GLU302 GLU303 ILE304 GLU305 GLY306 THR307 TYR308 PRO309 PHE310 THR311 ILE312 ASP313 ARG314 ALA315 VAL316 LYS317 GLY318 PHE319 ARG320 ILE321 ASN322 HIS323 PHE324 LEU325 HIS326 ARG327 LEU328 ILE329 GLU330 PRO331 ASP332 PHE333 ARG334 LYS335 ARG336 PHE337 VAL338 GLU339 ASP340 PRO341 GLU342 GLY343 LEU344 PHE345 ALA346 GLU347 SER348 ASP349 LEU350 THR351 GLU352 GLU353 GLU354 LYS355 SER356 LEU357 ILE358 ARG359 ASN360 ARG361 ASP362 TRP363 ILE364 GLY365 MET366 ILE367 HIS368 TYR369 GLY370 VAL371 ILE372 PHE373 PHE374 MET375 LEU376 GLU377 LYS378 MET379 ALA380 ALA381 VAL382 LEU383 GLY384 ILE385 GLY386 ASN387 ILE388 ASP389 VAL390 TYR391 ALA392 ALA393 PHE394 ARG395 GLY396 LEU397 SER398 VAL399 PRO400 GLU401 PHE402 GLN403 LYS404 THR405 ARG406 ASN407 ALA408 ALA409 |
Unit 2 | ALA2 LYS3 ILE4 ILE5 GLY6 GLY7 PHE8 ALA9 VAL10 SER11 HIS12 THR13 PRO14 THR15 ILE16 ALA17 PHE18 ALA19 HIS20 ASP21 ALA22 ASN23 LYS24 TYR25 ASP26 ASP27 PRO28 VAL29 TRP30 ALA31 PRO32 ILE33 PHE34 GLN35 GLY36 PHE37 GLU38 PRO39 VAL40 LYS41 GLN42 TRP43 LEU44 ALA45 GLU46 GLN47 LYS48 PRO49 ASP50 VAL51 THR52 PHE53 TYR54 VAL55 TYR56 ASN57 ASP58 HIS59 MET60 THR61 SER62 PHE63 PHE64 GLU65 HIS66 TYR67 SER68 HIS69 PHE70 ALA71 LEU72 GLY73 VAL74 GLY75 GLU76 GLU77 TYR78 SER79 PRO80 ALA81 ASP82 GLU83 GLY84 GLY85 GLY86 GLN87 ARG88 ASP89 LEU90 PRO91 PRO92 ILE93 LYS94 GLY95 ASP96 PRO97 GLU98 LEU99 ALA100 LYS101 HIS102 ILE103 ALA104 GLU105 CYS106 LEU107 VAL108 ALA109 ASP110 GLU111 PHE112 ASP113 LEU114 ALA115 TYR116 TRP117 GLN118 GLY119 MET120 GLY121 LEU122 ASP123 HIS124 GLY125 ALA126 PHE127 SER128 PRO129 LEU130 SER131 VAL132 LEU133 LEU134 PRO135 HIS136 GLU137 HIS138 GLY139 TRP140 PRO141 CYS142 ARG143 ILE144 VAL145 PRO146 LEU147 GLN148 CYS149 GLY150 VAL151 LEU152 GLN153 HIS154 PRO155 ILE156 PRO157 LYS158 ALA159 ARG160 ARG161 PHE162 TRP163 ASN164 PHE165 GLY166 ARG167 SER168 LEU169 ARG170 ARG171 ALA172 ILE173 GLN174 SER175 TYR176 PRO177 ARG178 ASP179 ILE180 LYS181 VAL182 ALA183 ILE184 ALA185 GLY186 THR187 GLY188 GLY189 LEU190 SER191 HIS192 GLN193 VAL194 HIS195 GLY196 GLU197 ARG198 ALA199 GLY200 PHE201 ASN202 ASN203 THR204 GLU205 TRP206 ASP207 MET208 GLU209 PHE210 MET211 GLU212 ARG213 LEU214 ALA215 ASN216 ASP217 PRO218 GLU219 SER220 LEU221 LEU222 GLY223 ALA224 THR225 VAL226 THR227 ASP228 LEU229 ALA230 LYS231 LYS232 GLY233 GLY234 TRP235 GLU236 GLY237 ALA238 GLU239 VAL240 VAL241 MET242 TRP243 LEU244 LEU245 MET246 ARG247 GLY248 ALA249 LEU250 SER251 PRO252 GLU253 VAL254 LYS255 THR256 LEU257 HIS258 GLN259 SER260 TYR261 PHE262 LEU263 PRO264 SER265 MET266 THR267 ALA268 ILE269 ALA270 THR271 MET272 LEU273 PHE274 GLU275 ASP276 GLN277 GLY278 ASP279 ALA280 ALA281 PRO282 PRO283 ALA284 GLU285 SER286 ASP287 GLU288 ALA289 LEU290 ARG291 ALA292 ARG293 ALA294 LYS295 ARG296 GLU297 LEU298 ALA299 GLY300 VAL301 GLU302 GLU303 ILE304 GLU305 GLY306 THR307 TYR308 PRO309 PHE310 THR311 ILE312 ASP313 ARG314 ALA315 VAL316 LYS317 GLY318 PHE319 ARG320 ILE321 ASN322 HIS323 PHE324 LEU325 HIS326 ARG327 LEU328 ILE329 GLU330 PRO331 ASP332 PHE333 ARG334 LYS335 ARG336 PHE337 VAL338 GLU339 ASP340 PRO341 GLU342 GLY343 LEU344 PHE345 ALA346 GLU347 SER348 ASP349 LEU350 THR351 GLU352 GLU353 GLU354 LYS355 SER356 LEU357 ILE358 ARG359 ASN360 ARG361 ASP362 TRP363 ILE364 GLY365 MET366 ILE367 HIS368 TYR369 GLY370 VAL371 ILE372 PHE373 PHE374 MET375 LEU376 GLU377 LYS378 MET379 ALA380 ALA381 VAL382 LEU383 GLY384 ILE385 GLY386 ASN387 ILE388 ASP389 VAL390 TYR391 ALA392 ALA393 PHE394 ARG395 GLY396 LEU397 SER398 VAL399 PRO400 GLU401 PHE402 GLN403 LYS404 THR405 ARG406 |
Unit 3 | FE2501 |
Unit 4 | FE2501 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |