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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOUSE TLR9 IN COMPLEX WITH INHIBITORY D (FORM 1)
Keywords LEUCINE RICH REPEAT, RECEPTOR, INNATE IMMUNITY, DNA BINDING, GLYCOSYLATION, CPG MOTIF, DNA BINDING PROTEIN-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3WPG     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TOLL-LIKE RECEPTOR 9  A 728 5757 0
2  Other macromolecule    B 11 227 0
3  Ligand   TOLL-LIKE RECEPTOR 9  A 5 0 34
4  Ligand    B 1 0 5
5 Water     77 0 77
total       822 5984 116
Proteins
Unit 1 THR28 LEU29 PRO30 ALA31 PHE32 LEU33 PRO34 CYS35 GLU36 LEU37 LYS38 GLY41 LEU42 VAL43 ASP44 CYS45 ASN46 TRP47 LEU48 PHE49 LEU50 LYS51 SER52 VAL53 PRO54 ARG55 PHE56 ALA60 SER61 CYS62 SER63 ASN64 ILE65 THR66 ARG67 LEU68 SER69 LEU70 ILE71 SER72 ASN73 ARG74 ILE75 HIS76 HIS77 LEU78 HIS79 ASN80 SER81 ASP82 PHE83 VAL84 HIS85 LEU86 SER87 ASN88 LEU89 ARG90 GLN91 LEU92 ASN93 LEU94 LYS95 TRP96 ASN97 CYS98 PRO99 PRO100 THR101 GLY102 SER109 CYS110 HIS111 MET112 THR113 ILE114 GLU115 PRO116 ARG117 THR118 PHE119 LEU120 ALA121 MET122 ARG123 THR124 LEU125 GLU126 GLU127 LEU128 ASN129 LEU130 SER131 TYR132 ASN133 GLY134 ILE135 THR136 THR137 VAL138 PRO139 ARG140 LEU141 PRO142 SER143 SER144 LEU145 VAL146 ASN147 LEU148 SER149 LEU150 SER151 HIS152 THR153 ASN154 ILE155 LEU156 VAL157 LEU158 ASP159 ALA160 ASN161 SER162 LEU163 ALA164 GLY165 LEU166 TYR167 SER168 LEU169 ARG170 VAL171 LEU172 PHE173 MET174 ASP175 GLY176 ASN177 CYS178 TYR179 TYR180 LYS181 ASN182 PRO183 CYS184 THR185 GLY186 ALA187 VAL188 LYS189 VAL190 THR191 PRO192 GLY193 ALA194 LEU195 LEU196 GLY197 LEU198 SER199 GLN200 LEU201 THR202 HIS203 LEU204 SER205 LEU206 LYS207 TYR208 ASN209 ASN210 LEU211 THR212 LYS213 VAL214 PRO215 ARG216 GLN217 LEU218 PRO219 PRO220 SER221 LEU222 GLU223 TYR224 LEU225 LEU226 VAL227 SER228 TYR229 ASN230 LEU231 ILE232 VAL233 LYS234 LEU235 GLY236 PRO237 GLU238 ASP239 LEU240 ALA241 GLN242 LEU243 THR244 SER245 LEU246 ARG247 VAL248 LEU249 ASP250 VAL251 GLY252 GLY253 ASN254 CYS255 ARG256 ARG257 CYS258 ASP259 HIS260 ALA261 PRO262 ASN263 PRO264 CYS265 ILE266 GLU267 CYS268 GLY269 GLN270 LYS271 SER272 LEU273 HIS274 LEU275 HIS276 PRO277 GLU278 THR279 PHE280 HIS281 HIS282 LEU283 SER284 HIS285 LEU286 GLU287 GLY288 LEU289 VAL290 LEU291 LYS292 ASP293 SER294 SER295 LEU296 HIS297 THR298 LEU299 ASN300 SER301 SER302 TRP303 PHE304 GLN305 GLY306 LEU307 VAL308 GLN309 LEU310 SER311 VAL312 LEU313 ASP314 LEU315 SER316 GLU317 ASN318 PHE319 LEU320 TYR321 GLU322 SER323 ILE324 THR325 HIS326 THR327 ASN328 ALA329 PHE330 GLN331 ASN332 LEU333 THR334 ARG335 LEU336 ARG337 LYS338 LEU339 ASN340 LEU341 SER342 PHE343 ASN344 TYR345 ARG346 LYS347 ALA352 ARG353 LEU354 HIS355 LEU356 ALA357 SER358 SER359 PHE360 LYS361 ASN362 LEU363 VAL364 SER365 LEU366 GLN367 GLU368 LEU369 ASN370 MET371 ASN372 GLY373 ILE374 PHE375 PHE376 ARG377 LEU378 LEU379 ASN380 LYS381 TYR382 THR383 LEU384 ARG385 TRP386 LEU387 ALA388 ASP389 LEU390 PRO391 LYS392 LEU393 HIS394 THR395 LEU396 HIS397 LEU398 GLN399 MET400 ASN401 PHE402 ILE403 ASN404 GLN405 ALA406 GLN407 LEU408 SER409 ILE410 PHE411 GLY412 THR413 PHE414 ARG415 ALA416 LEU417 ARG418 PHE419 VAL420 ASP421 LEU422 SER423 ASP424 ASN425 ARG426 ILE427 SER428 GLY429 PRO430 SER431 THR432 MET468 ASP469 ARG470 CYS471 LYS472 ASN473 PHE474 LYS475 PHE476 THR477 MET478 ASP479 LEU480 SER481 ARG482 ASN483 ASN484 LEU485 VAL486 THR487 ILE488 LYS489 PRO490 GLU491 MET492 PHE493 VAL494 GLN495 LEU496 SER497 ARG498 LEU499 GLN500 CYS501 LEU502 SER503 LEU504 SER505 HIS506 ASN507 SER508 ILE509 ALA510 GLN511 ALA512 VAL513 ASN514 GLY515 SER516 GLN517 PHE518 LEU519 PRO520 LEU521 THR522 ASN523 LEU524 GLN525 VAL526 LEU527 ASP528 LEU529 SER530 HIS531 ASN532 LYS533 LEU534 ASP535 LEU536 TYR537 HIS538 TRP539 LYS540 SER541 PHE542 SER543 GLU544 LEU545 PRO546 GLN547 LEU548 GLN549 ALA550 LEU551 ASP552 LEU553 SER554 TYR555 ASN556 SER557 GLN558 GLY564 ILE565 GLY566 HIS567 GLN568 PHE569 SER570 PHE571 VAL572 THR573 HIS574 LEU575 SER576 MET577 LEU578 GLN579 SER580 LEU581 SER582 LEU583 ALA584 HIS585 ASN586 ASP587 ILE588 HIS589 THR590 ARG591 VAL592 SER593 SER594 HIS595 LEU596 ASN597 SER598 ASN599 SER600 VAL601 ARG602 PHE603 LEU604 ASP605 PHE606 SER607 GLY608 ASN609 GLY610 MET611 GLY612 ARG613 MET614 TRP615 ASP616 GLU617 GLY618 GLY619 LEU620 TYR621 LEU622 HIS623 PHE624 PHE625 GLN626 GLY627 LEU628 SER629 GLY630 LEU631 LEU632 LYS633 LEU634 ASP635 LEU636 SER637 GLN638 ASN639 ASN640 LEU641 HIS642 ILE643 LEU644 ARG645 PRO646 GLN647 ASN648 LEU649 ASP650 ASN651 LEU652 PRO653 LYS654 SER655 LEU656 LYS657 LEU658 LEU659 SER660 LEU661 ARG662 ASP663 ASN664 TYR665 LEU666 SER667 PHE668 PHE669 ASN670 TRP671 THR672 SER673 LEU674 SER675 PHE676 LEU677 PRO678 ASN679 LEU680 GLU681 VAL682 LEU683 ASP684 LEU685 ALA686 GLY687 ASN688 GLN689 LEU690 LYS691 ALA692 LEU693 THR694 GLN695 GLY696 THR697 LEU698 PRO699 ASN700 GLY701 THR702 LEU703 LEU704 GLN705 LYS706 LEU707 ASP708 VAL709 SER710 SER711 ASN712 SER713 ILE714 VAL715 SER716 VAL717 VAL718 PRO719 ALA720 PHE721 PHE722 ALA723 LEU724 ALA725 VAL726 GLU727 LEU728 LYS729 GLU730 VAL731 ASN732 LEU733 SER734 HIS735 ASN736 ILE737 LEU738 LYS739 THR740 VAL741 ASP742 ARG743 SER744 TRP745 PHE746 GLY747 PRO748 ILE749 VAL750 MET751 GLN752 LEU753 THR754 VAL755 LEU756 ASP757 VAL758 ARG759 SER760 ASN761 PRO762 LEU763 HIS764 CYS765 ALA766 CYS767 GLY768 ALA769 ALA770 PHE771 VAL772 ASP773 LEU774 LEU775 LEU776 GLU777 VAL778 GLN779 THR780 LYS781 VAL782 PRO783 GLY784 LEU785 ALA786 ASN787 GLY788 VAL789 LYS790 CYS791 GLY792 SER793 PRO794 GLY795 GLN796 LEU797 GLN798 GLY799 ARG800 SER801 ILE802 PHE803 ALA804 GLN805 ASP806 LEU807 ARG808 LEU809 CYS810
Other macromolecules
Unit 2 DC1 DC2 DT3 DG4 DG5 DA6 DT7 DG8 DG9 DG10 DA11
Ligands
Unit 3 NAG901 SO4902 SO4903 SO4904 SO4905
Unit 4 SO4101
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany