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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PROTEIN-RNA COMPLEX
Keywords PROTEIN-RNA COMPLEX, DNA/RNA BINDING, RNA BINDING PROTEIN-RN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA/RNA-BINDING PROTEIN ALBA 1  A 86 663 0
2  Protein   DNA/RNA-BINDING PROTEIN ALBA 1  B 84 649 0
3  Protein   DNA/RNA-BINDING PROTEIN ALBA 1  C 86 663 0
4  Protein   DNA/RNA-BINDING PROTEIN ALBA 1  D 89 689 0
5  RNA    X 25 525 0
6  RNA    Y 25 525 0
7 Water     310 0 310
total       705 3714 310

Proteins
Unit 1 THR5 PRO6 THR7 PRO8 SER9 ASN10 VAL11 VAL12 LEU13 ILE14 GLY15 LYS16 LYS17 PRO18 VAL19 MET20 ASN21 TYR22 VAL23 LEU24 ALA25 ALA26 LEU27 THR28 LEU29 LEU30 ASN31 GLN32 GLY33 VAL34 SER35 GLU36 ILE37 VAL38 ILE39 LYS40 ALA41 ARG42 GLY43 ARG44 ALA45 ILE46 SER47 LYS48 ALA49 VAL50 ASP51 THR52 VAL53 GLU54 ILE55 VAL56 ARG57 ASN58 ARG59 PHE60 LEU61 PRO62 ASP63 LYS64 ILE65 GLU66 ILE67 LYS68 GLU69 ILE70 ARG71 VAL72 GLY73 SER74 GLN75 VAL76 VAL77 SER85 ARG86 VAL87 SER88 THR89 ILE90 GLU91 ILE92 ALA93 ILE94 ARG95 LYS96 LYS97
Unit 2 THR7 PRO8 SER9 ASN10 VAL11 VAL12 LEU13 ILE14 GLY15 LYS16 LYS17 PRO18 VAL19 MET20 ASN21 TYR22 VAL23 LEU24 ALA25 ALA26 LEU27 THR28 LEU29 LEU30 ASN31 GLN32 GLY33 VAL34 SER35 GLU36 ILE37 VAL38 ILE39 LYS40 ALA41 ARG42 GLY43 ARG44 ALA45 ILE46 SER47 LYS48 ALA49 VAL50 ASP51 THR52 VAL53 GLU54 ILE55 VAL56 ARG57 ASN58 ARG59 PHE60 LEU61 PRO62 ASP63 LYS64 ILE65 GLU66 ILE67 LYS68 GLU69 ILE70 ARG71 VAL72 GLY73 SER74 GLN75 VAL76 VAL77 SER85 ARG86 VAL87 SER88 THR89 ILE90 GLU91 ILE92 ALA93 ILE94 ARG95 LYS96 LYS97
Unit 3 THR5 PRO6 THR7 PRO8 SER9 ASN10 VAL11 VAL12 LEU13 ILE14 GLY15 LYS16 LYS17 PRO18 VAL19 MET20 ASN21 TYR22 VAL23 LEU24 ALA25 ALA26 LEU27 THR28 LEU29 LEU30 ASN31 GLN32 GLY33 VAL34 SER35 GLU36 ILE37 VAL38 ILE39 LYS40 ALA41 ARG42 GLY43 ARG44 ALA45 ILE46 SER47 LYS48 ALA49 VAL50 ASP51 THR52 VAL53 GLU54 ILE55 VAL56 ARG57 ASN58 ARG59 PHE60 LEU61 PRO62 ASP63 LYS64 ILE65 GLU66 ILE67 LYS68 GLU69 ILE70 ARG71 VAL72 GLY73 SER74 GLN75 VAL76 VAL77 SER85 ARG86 VAL87 SER88 THR89 ILE90 GLU91 ILE92 ALA93 ILE94 ARG95 LYS96 LYS97
Unit 4 SER9 ASN10 VAL11 VAL12 LEU13 ILE14 GLY15 LYS16 LYS17 PRO18 VAL19 MET20 ASN21 TYR22 VAL23 LEU24 ALA25 ALA26 LEU27 THR28 LEU29 LEU30 ASN31 GLN32 GLY33 VAL34 SER35 GLU36 ILE37 VAL38 ILE39 LYS40 ALA41 ARG42 GLY43 ARG44 ALA45 ILE46 SER47 LYS48 ALA49 VAL50 ASP51 THR52 VAL53 GLU54 ILE55 VAL56 ARG57 ASN58 ARG59 PHE60 LEU61 PRO62 ASP63 LYS64 ILE65 GLU66 ILE67 LYS68 GLU69 ILE70 ARG71 VAL72 GLY73 SER74 GLN75 VAL76 VAL77 THR78 SER79 GLN80 ASP81 GLY82 ARG83 GLN84 SER85 ARG86 VAL87 SER88 THR89 ILE90 GLU91 ILE92 ALA93 ILE94 ARG95 LYS96 LYS97

Nucleic acids
Unit 5 G1 G2 U3 A4 A5 G6 A7 G8 C9 A10 C11 C12 C13 G14 A15 C16 U17 G18 C19 U20 C21 U22 U23 C24 C25
Unit 6 G1 G2 U3 A4 A5 G6 A7 G8 C9 A10 C11 C12 C13 G14 A15 C16 U17 G18 C19 U20 C21 U22 U23 C24 C25

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany