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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL INSIGHTS INTO RISC ASSEMBLY FACILITATED BY DSRNA DOMAINS OF HUMAN RNA HELICASE (DHX9)
Keywords PROTEIN-DSRNA COMPLEX, DSRBD FOLD, DSRNA BINDING, PROTEIN-PR INTERACTION, HYDROLASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3VYX     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ATP-DEPENDENT RNA HELICASE A  A 95 765 0
2  RNA    B 10 216 0
3  RNA    C 10 216 0
4 Water     82 0 82
total       197 1197 82

Proteins
Unit 1 ASN169 ALA170 GLY171 LEU172 HIS173 GLY174 ASN175 TRP176 THR177 LEU178 GLU179 ASN180 ALA181 LYS182 ALA183 ARG184 LEU185 ASN186 GLN187 TYR188 PHE189 GLN190 LYS191 GLU192 LYS193 ILE194 GLN195 GLY196 GLU197 TYR198 LYS199 TYR200 THR201 GLN202 VAL203 GLY204 PRO205 ASP206 HIS207 ASN208 ARG209 SER210 PHE211 ILE212 ALA213 GLU214 MET215 THR216 ILE217 TYR218 ILE219 LYS220 GLN221 LEU222 GLY223 ARG224 ARG225 ILE226 PHE227 ALA228 ARG229 GLU230 HIS231 GLY232 SER233 ASN234 LYS235 LYS236 LEU237 ALA238 ALA239 GLN240 SER241 CYS242 ALA243 LEU244 SER245 LEU246 VAL247 ARG248 GLN249 LEU250 TYR251 HIS252 LEU253 GLY254 VAL255 VAL256 GLU257 ALA258 TYR259 SER260 GLY261 LEU262 THR263

Nucleic acids
Unit 2 G1 C2 G3 C4 G5 C6 G7 C8 G9 C10
Unit 3 G1 C2 G3 C4 G5 C6 G7 C8 G9 C10

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany