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Sequence, Chains, Asymmetric and Biological Units

Title THE COMPLEX BETWEEN H27-14 TCR AND HLA-A24 BOUND TO HIV-1 NE 10(WT) PEPTIDE
Keywords HIV-1, NEF, IMMUNE SYSTEM, HLA-A24, T CELL RECEPTOR, MHC CLA IMMUNOGLOBURIN DOMAIN, TCR, MHC, IMMUNE RESPONSE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3VXR     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 274 2222 0
2  Protein   BETA-2-MICROGLOBULIN  B 100 836 0
3  Protein   H27-14 TCR ALPHA CHAIN  D 194 1493 0
4  Protein   H27-14 TCR BETA CHAIN  E 242 1954 0
5  Protein   10-MER PEPTIDE FROM PROTEIN NEF  C 10 92 0
6 Water     264 0 264
total       1084 6597 264

Proteins
Unit 1 GLY1 SER2 HIS3 SER4 MET5 ARG6 TYR7 PHE8 SER9 THR10 SER11 VAL12 SER13 ARG14 PRO15 GLY16 ARG17 GLY18 GLU19 PRO20 ARG21 PHE22 ILE23 ALA24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 THR31 GLN32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 ALA41 SER42 GLN43 ARG44 MET45 GLU46 PRO47 ARG48 ALA49 PRO50 TRP51 ILE52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 ASP61 GLU62 GLU63 THR64 GLY65 LYS66 VAL67 LYS68 ALA69 HIS70 SER71 GLN72 THR73 ASP74 ARG75 GLU76 ASN77 LEU78 ARG79 ILE80 ALA81 LEU82 ARG83 TYR84 TYR85 ASN86 GLN87 SER88 GLU89 ALA90 GLY91 SER92 HIS93 THR94 LEU95 GLN96 MET97 MET98 PHE99 GLY100 CYS101 ASP102 VAL103 GLY104 SER105 ASP106 GLY107 ARG108 PHE109 LEU110 ARG111 GLY112 TYR113 HIS114 GLN115 TYR116 ALA117 TYR118 ASP119 GLY120 LYS121 ASP122 TYR123 ILE124 ALA125 LEU126 LYS127 GLU128 ASP129 LEU130 ARG131 SER132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLN141 ILE142 THR143 LYS144 ARG145 LYS146 TRP147 GLU148 ALA149 ALA150 HIS151 VAL152 ALA153 GLU154 GLN155 GLN156 ARG157 ALA158 TYR159 LEU160 GLU161 GLY162 THR163 CYS164 VAL165 ASP166 GLY167 LEU168 ARG169 ARG170 TYR171 LEU172 GLU173 ASN174 GLY175 LYS176 GLU177 THR178 LEU179 GLN180 ARG181 THR182 ASP183 PRO184 PRO185 LYS186 THR187 HIS188 MET189 THR190 HIS191 HIS192 PRO193 ILE194 SER195 ASP196 HIS197 GLU198 ALA199 THR200 LEU201 ARG202 CYS203 TRP204 ALA205 LEU206 GLY207 PHE208 TYR209 PRO210 ALA211 GLU212 ILE213 THR214 LEU215 THR216 TRP217 GLN218 ARG219 ASP220 GLY221 GLU222 ASP223 GLN224 THR225 GLN226 ASP227 THR228 GLU229 LEU230 VAL231 GLU232 THR233 ARG234 PRO235 ALA236 GLY237 ASP238 GLY239 THR240 PHE241 GLN242 LYS243 TRP244 ALA245 ALA246 VAL247 VAL248 VAL249 PRO250 SER251 GLY252 GLU253 GLU254 GLN255 ARG256 TYR257 THR258 CYS259 HIS260 VAL261 GLN262 HIS263 GLU264 GLY265 LEU266 PRO267 LYS268 PRO269 LEU270 THR271 LEU272 ARG273 TRP274
Unit 2 MET0 ILE1 GLN2 ARG3 THR4 PRO5 LYS6 ILE7 GLN8 VAL9 TYR10 SER11 ARG12 HIS13 PRO14 ALA15 GLU16 ASN17 GLY18 LYS19 SER20 ASN21 PHE22 LEU23 ASN24 CYS25 TYR26 VAL27 SER28 GLY29 PHE30 HIS31 PRO32 SER33 ASP34 ILE35 GLU36 VAL37 ASP38 LEU39 LEU40 LYS41 ASN42 GLY43 GLU44 ARG45 ILE46 GLU47 LYS48 VAL49 GLU50 HIS51 SER52 ASP53 LEU54 SER55 PHE56 SER57 LYS58 ASP59 TRP60 SER61 PHE62 TYR63 LEU64 LEU65 TYR66 TYR67 THR68 GLU69 PHE70 THR71 PRO72 THR73 GLU74 LYS75 ASP76 GLU77 TYR78 ALA79 CYS80 ARG81 VAL82 ASN83 HIS84 VAL85 THR86 LEU87 SER88 GLN89 PRO90 LYS91 ILE92 VAL93 LYS94 TRP95 ASP96 ARG97 ASP98 MET99
Unit 3 LYS1 GLN2 GLU3 VAL4 THR5 GLN6 ILE7 PRO8 ALA9 ALA10 LEU11 SER12 VAL13 PRO14 GLU15 GLY16 GLU17 ASN18 LEU19 VAL20 LEU21 ASN22 CYS23 SER24 PHE25 THR26 ASP27 SER28 ALA29 ILE30 TYR31 ASN32 LEU33 GLN34 TRP35 PHE36 ARG37 GLN38 ASP39 PRO40 GLY41 LYS42 GLY43 LEU44 THR45 SER46 LEU47 LEU48 LEU49 ILE50 GLN51 SER52 SER53 GLN54 ARG55 GLU56 GLN57 THR58 SER59 GLY60 ARG61 LEU62 ASN63 ALA64 SER65 LEU66 ASP67 LYS68 SER69 SER70 GLY71 ARG72 SER73 THR74 LEU75 TYR76 ILE77 ALA78 ALA79 SER80 GLN81 PRO82 GLY83 ASP84 SER85 ALA86 THR87 TYR88 LEU89 CYS90 ALA91 VAL92 ARG93 MET94 ASP95 SER96 SER97 TYR98 LYS99 LEU100 ILE101 PHE102 GLY103 SER104 GLY105 THR106 ARG107 LEU108 LEU109 VAL110 ARG111 PRO112 ASP113 ILE114 GLN115 ASN116 PRO117 ASP118 PRO119 ALA120 VAL121 TYR122 GLN123 LEU124 ARG125 ASP126 SER127 LYS128 SER129 SER130 ASP131 LYS132 SER133 VAL134 CYS135 LEU136 PHE137 THR138 ASP139 PHE140 ASP141 SER142 GLN143 THR144 ASN145 VAL146 SER147 GLN148 SER149 LYS150 ASP151 SER152 ASP153 VAL154 TYR155 ILE156 THR157 ASP158 LYS159 CYS160 VAL161 LEU162 ASP163 MET164 ARG165 SER166 MET167 ASP168 PHE169 LYS170 SER171 ASN172 SER173 ALA174 VAL175 ALA176 TRP177 SER178 ASN179 LYS180 SER181 ASP182 PHE183 ALA184 CYS185 ALA186 ASN187 ALA188 PHE189 ASN190 ASN191 SER192 ILE193 ILE194
Unit 4 THR2 GLY3 VAL4 SER5 GLN6 ASN7 PRO8 ARG9 HIS10 LYS11 ILE12 THR13 LYS14 ARG15 GLY16 GLN17 ASN18 VAL19 THR20 PHE21 ARG22 CYS23 ASP24 PRO25 ILE26 SER27 GLU28 HIS29 ASN30 ARG31 LEU32 TYR33 TRP34 TYR35 ARG36 GLN37 THR38 LEU39 GLY40 GLN41 GLY42 PRO43 GLU44 PHE45 LEU46 THR47 TYR48 PHE49 GLN50 ASN51 GLU52 ALA53 GLN54 LEU55 GLU56 LYS57 SER58 ARG59 LEU60 LEU61 SER62 ASP63 ARG64 PHE65 SER66 ALA67 GLU68 ARG69 PRO70 LYS71 GLY72 SER73 PHE74 SER75 THR76 LEU77 GLU78 ILE79 GLN80 ARG81 THR82 GLU83 GLN84 GLY85 ASP86 SER87 ALA88 MET89 TYR90 LEU91 CYS92 ALA93 SER94 SER95 SER96 TRP97 ASP98 THR99 GLY100 GLU101 LEU102 PHE103 PHE104 GLY105 GLU106 GLY107 SER108 ARG109 LEU110 THR111 VAL112 LEU113 GLU114 ASP115 LEU116 LYS117 ASN118 VAL119 PHE120 PRO121 PRO122 GLU123 VAL124 ALA125 VAL126 PHE127 GLU128 PRO129 SER130 GLU131 ALA132 GLU133 ILE134 SER135 HIS136 THR137 GLN138 LYS139 ALA140 THR141 LEU142 VAL143 CYS144 LEU145 ALA146 THR147 GLY148 PHE149 TYR150 PRO151 ASP152 HIS153 VAL154 GLU155 LEU156 SER157 TRP158 TRP159 VAL160 ASN161 GLY162 LYS163 GLU164 VAL165 HIS166 SER167 GLY168 VAL169 CYS170 THR171 ASP172 PRO173 GLN174 PRO175 LEU176 LYS177 GLU178 GLN179 PRO180 ALA181 LEU182 ASN183 ASP184 SER185 ARG186 TYR187 ALA188 LEU189 SER190 SER191 ARG192 LEU193 ARG194 VAL195 SER196 ALA197 THR198 PHE199 TRP200 GLN201 ASN202 PRO203 ARG204 ASN205 HIS206 PHE207 ARG208 CYS209 GLN210 VAL211 GLN212 PHE213 TYR214 GLY215 LEU216 SER217 GLU218 ASN219 ASP220 GLU221 TRP222 THR223 GLN224 ASP225 ARG226 ALA227 LYS228 PRO229 VAL230 THR231 GLN232 ILE233 VAL234 SER235 ALA236 GLU237 ALA238 TRP239 GLY240 ARG241 ALA242 ASP243
Unit 5 ARG1 TYR2 PRO3 LEU4 THR5 PHE6 GLY7 TRP8 CYS9 PHE10

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany