3VQY - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF PYRROLYSYL-TRNA SYNTHETASE IN COMPLEX WITH BOCLYS AND AMPPNP (FORM 2)
• Keywords: STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STR AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMI INITIATIVE, RSGI, AMINOACYL-TRNA SYNTHETASE, PYRROLYSYL-TRN SYNTHETASE, AMPPNP, BOCLYS, LIGASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3VQY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYRROLYSINE--TRNA LIGASE	A	257	2087	0
2	Ligand	PYRROLYSINE--TRNA LIGASE	A	4	0	50
3	Water			98	0	98
total				359	2087	148

Proteins

Unit 1

PRO 188 ALA 189 LEU 190 THR 191 LYS 192 SER 193 GLN 194 THR 195 ASP 196 ARG 197 LEU 198 GLU 199 VAL 200 LEU 201 LEU 202 ASN 203 PRO 204 LYS 205 ASP 206 GLU 207 SER 212 GLY 213 LYS 214 PRO 215 PHE 216 ARG 217 GLU 218 LEU 219 GLU 220 SER 221 GLU 222 LEU 223 LEU 224 SER 225 ARG 226 ARG 227 LYS 228 LYS 229 ASP 230 LEU 231 GLN 232 GLN 233 ILE 234 TYR 235 ALA 236 GLU 237 GLU 238 ARG 239 GLU 240 ASN 241 TYR 242 LEU 243 GLY 244 LYS 245 LEU 246 GLU 247 ARG 248 GLU 249 ILE 250 THR 251 ARG 252 PHE 253 PHE 254 VAL 255 ASP 256 ARG 257 GLY 258 PHE 259 LEU 260 GLU 261 ILE 262 LYS 263 SER 264 PRO 265 ILE 266 LEU 267 ILE 268 PRO 269 LEU 270 GLU 271 TYR 272 ILE 273 GLU 274 ARG 275 MET 276 GLY 277 ILE 278 ASP 279 ASN 280 ASP 281 THR 282 GLU 283 LEU 284 SER 285 LYS 286 GLN 287 ILE 288 PHE 289 ARG 290 VAL 291 ASP 292 LYS 293 ASN 294 PHE 295 CYS 296 LEU 297 ARG 298 PRO 299 MET 300 LEU 301 ALA 302 PRO 303 ASN 304 LEU 305 TYR 306 ASN 307 TYR 308 LEU 309 ARG 310 LYS 311 LEU 312 ASP 313 ARG 314 ALA 315 LEU 316 PRO 317 ASP 318 PRO 319 ILE 320 LYS 321 ILE 322 PHE 323 GLU 324 ILE 325 GLY 326 PRO 327 CYS 328 TYR 329 ARG 330 LYS 331 GLU 332 SER 333 ASP 334 GLY 335 LYS 336 GLU 337 HIS 338 LEU 339 GLU 340 GLU 341 PHE 342 THR 343 MET 344 LEU 345 ASN 346 PHE 347 CYS 348 GLN 349 MET 350 GLY 351 SER 352 GLY 353 CYS 354 THR 355 ARG 356 GLU 357 ASN 358 LEU 359 GLU 360 SER 361 ILE 362 ILE 363 THR 364 ASP 365 PHE 366 LEU 367 ASN 368 HIS 369 LEU 370 GLY 371 ILE 372 ASP 373 PHE 374 LYS 375 ILE 376 VAL 377 GLY 378 GLY 385 ASP 386 THR 387 LEU 388 ASP 389 VAL 390 MET 391 HIS 392 GLY 393 ASP 394 LEU 395 GLU 396 LEU 397 SER 398 SER 399 ALA 400 VAL 401 VAL 402 GLY 403 PRO 404 ILE 405 PRO 406 LEU 407 ASP 408 ARG 409 GLU 410 TRP 411 GLY 412 ILE 413 ASP 414 LYS 415 PRO 416 TRP 417 ILE 418 GLY 419 ALA 420 GLY 421 PHE 422 GLY 423 LEU 424 GLU 425 ARG 426 LEU 427 LEU 428 LYS 429 VAL 430 LYS 431 HIS 432 ASP 433 PHE 434 LYS 435 ASN 436 ILE 437 LYS 438 ARG 439 ALA 440 ALA 441 ARG 442 SER 443 GLY 444 SER 445 TYR 446 TYR 447 ASN 448 GLY 449 ILE 450 SER 451 THR 452 ASN 453 LEU 454

Ligands

Unit 2

ANP 501 LBY 502 MG 503 MG 504