3VQD - Sequence, Chains, Asymmetric and Biological Units

• Title: HIV-1 IN CORE DOMAIN IN COMPLEX WITH 5-METHYL-3-PHENYL-1,2-O CARBOXYLIC ACID
• Keywords: RNASEH, DNA BINDING, DNA CLEAVAGE, DNA INTEGRATION, TRANSFER TRANSFERASE INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3VQD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	POL POLYPROTEIN	A	141	1077	0
2	Protein	POL POLYPROTEIN	B	140	1075	0
3	Ligand	POL POLYPROTEIN	A	4	0	22
4	Ligand	POL POLYPROTEIN	B	3	0	7
5	Water			65	0	65
total				353	2152	94

Proteins

Unit 1

SER 57 PRO 58 GLY 59 ILE 60 TRP 61 GLN 62 LEU 63 ASP 64 CYS 65 THR 66 HIS 67 LEU 68 GLU 69 GLY 70 LYS 71 VAL 72 ILE 73 LEU 74 VAL 75 ALA 76 VAL 77 HIS 78 VAL 79 ALA 80 SER 81 GLY 82 TYR 83 ILE 84 GLU 85 ALA 86 GLU 87 VAL 88 ILE 89 PRO 90 ALA 91 GLU 92 THR 93 GLY 94 GLN 95 GLU 96 THR 97 ALA 98 TYR 99 PHE 100 LEU 101 LEU 102 LYS 103 LEU 104 ALA 105 GLY 106 ARG 107 TRP 108 PRO 109 VAL 110 LYS 111 THR 112 VAL 113 HIS 114 THR 115 ASP 116 ASN 117 GLY 118 SER 119 ASN 120 PHE 121 THR 122 SER 123 THR 124 THR 125 VAL 126 LYS 127 ALA 128 ALA 129 CYS 130 ASP 131 TRP 132 ALA 133 GLY 134 ILE 135 LYS 136 GLN 137 GLU 138 ASP 139 GLY 140 ILE 141 PRO 142 SER 153 MET 154 ASN 155 LYS 156 GLU 157 LEU 158 LYS 159 LYS 160 ILE 161 ILE 162 GLY 163 GLN 164 VAL 165 ARG 166 ASP 167 GLN 168 ALA 169 GLU 170 HIS 171 LEU 172 LYS 173 THR 174 ALA 175 VAL 176 GLN 177 MET 178 ALA 179 VAL 180 PHE 181 ILE 182 HIS 183 ASN 184 HIS 185 LYS 186 ARG 187 LYS 188 GLY 189 GLY 190 ILE 191 GLY 192 GLY 193 TYR 194 SER 195 ALA 196 GLY 197 GLU 198 ARG 199 ILE 200 VAL 201 ASP 202 ILE 203 ILE 204 ALA 205 THR 206 ASP 207

Unit 2

SER 57 PRO 58 GLY 59 ILE 60 TRP 61 GLN 62 LEU 63 ASP 64 CYS 65 THR 66 HIS 67 LEU 68 GLU 69 GLY 70 LYS 71 VAL 72 ILE 73 LEU 74 VAL 75 ALA 76 VAL 77 HIS 78 VAL 79 ALA 80 SER 81 GLY 82 TYR 83 ILE 84 GLU 85 ALA 86 GLU 87 VAL 88 ILE 89 PRO 90 ALA 91 GLU 92 THR 93 GLY 94 GLN 95 GLU 96 THR 97 ALA 98 TYR 99 PHE 100 LEU 101 LEU 102 LYS 103 LEU 104 ALA 105 GLY 106 ARG 107 TRP 108 PRO 109 VAL 110 LYS 111 THR 112 VAL 113 HIS 114 THR 115 ASP 116 ASN 117 GLY 118 SER 119 ASN 120 PHE 121 THR 122 SER 123 THR 124 THR 125 VAL 126 LYS 127 ALA 128 ALA 129 CYS 130 ASP 131 TRP 132 ALA 133 GLY 134 ILE 135 LYS 136 GLN 137 GLU 138 ASP 139 GLU 152 SER 153 MET 154 ASN 155 LYS 156 GLU 157 LEU 158 LYS 159 LYS 160 ILE 161 ILE 162 GLY 163 GLN 164 VAL 165 ARG 166 ASP 167 GLN 168 ALA 169 GLU 170 HIS 171 LEU 172 LYS 173 THR 174 ALA 175 VAL 176 GLN 177 MET 178 ALA 179 VAL 180 PHE 181 ILE 182 HIS 183 ASN 184 HIS 185 LYS 186 ARG 187 LYS 188 GLY 189 GLY 190 ILE 191 GLY 192 GLY 193 TYR 194 SER 195 ALA 196 GLY 197 GLU 198 ARG 199 ILE 200 VAL 201 ASP 202 ILE 203 ILE 204 ALA 205 THR 206 ASP 207 ILE 208

Ligands

Unit 3	CD 301 CD 302 SO4 303 MOK 304
Unit 4	CD 301 CD 302 SO4 303