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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BACD, AN L-AMINO ACID DIPEPTIDE LIGASE BACILLUS SUBTILIS
Keywords ATP-GRASP DOMAIN, AMINO ACID LIGASE, ATP BINDING, LIGASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3VMM     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALANINE-ANTICAPSIN LIGASE BACD  A 471 3675 0
2  Ligand   ALANINE-ANTICAPSIN LIGASE BACD  A 4 0 51
3 Water     147 0 147
total       622 3675 198

Proteins
Unit 1 GLU2 ARG3 LYS4 THR5 VAL6 LEU7 VAL8 ILE9 ALA10 ASP11 LEU12 GLY13 GLY14 CYS15 PRO16 PRO17 HIS18 MET19 PHE20 TYR21 LYS22 SER23 ALA24 ALA25 GLU26 LYS27 TYR28 ASN29 LEU30 VAL31 SER32 PHE33 ILE34 PRO35 ARG36 PRO37 PHE38 ALA39 ILE40 THR41 ALA42 SER43 HIS44 ALA45 ALA46 LEU47 ILE48 GLU49 LYS50 TYR51 SER52 VAL53 ALA54 VAL55 ILE56 LYS57 ASP58 LYS59 ASP60 TYR61 PHE62 LYS63 SER64 LEU65 ALA66 ASP67 PHE68 GLU69 HIS70 PRO71 ASP72 SER73 ILE74 TYR75 TRP76 ALA77 HIS78 GLU79 ASP80 HIS81 ASN82 LYS83 PRO84 GLU85 GLU86 GLU87 VAL88 VAL89 GLU90 GLN91 ILE92 VAL93 LYS94 VAL95 ALA96 GLU97 MET98 PHE99 GLY100 ALA101 ASP102 ALA103 ILE104 THR105 THR106 ASN107 ASN108 GLU109 LEU110 PHE111 ILE112 ALA113 PRO114 MET115 ALA116 LYS117 ALA118 CYS119 GLU120 ARG121 LEU122 GLY123 LEU124 ARG125 GLY126 ALA127 GLY128 VAL129 GLN130 ALA131 ALA132 GLU133 ASN134 ALA135 ARG136 ASP137 LYS138 ASN139 LYS140 MET141 ARG142 ASP143 ALA144 PHE145 ASN146 LYS147 ALA148 GLY149 VAL150 LYS151 SER152 ILE153 LYS154 ASN155 LYS156 ARG157 VAL158 THR159 THR160 LEU161 GLU162 ASP163 PHE164 ARG165 ALA166 ALA167 LEU168 GLU169 GLU170 ILE171 GLY172 THR173 PRO174 LEU175 ILE176 LEU177 LYS178 PRO179 THR180 TYR181 LEU182 ALA183 SER184 SER185 ILE186 GLY187 VAL188 THR189 LEU190 ILE191 THR192 ASP193 THR194 GLU195 THR196 ALA197 GLU198 ASP199 GLU200 PHE201 ASN202 ARG203 VAL204 ASN205 ASP206 TYR207 LEU208 LYS209 SER210 ILE211 ASN212 VAL213 PRO214 LYS215 ALA216 VAL217 THR218 PHE219 GLU220 ALA221 PRO222 PHE223 ILE224 ALA225 GLU226 GLU227 PHE228 LEU229 GLN230 GLY231 GLU232 TYR233 GLY234 ASP235 TRP236 TYR237 GLN238 THR239 GLU240 GLY241 TYR242 SER243 ASP244 TYR245 ILE246 SER247 ILE248 GLU249 GLY250 ILE251 MET252 ALA253 ASP254 GLY255 GLU256 TYR257 PHE258 PRO259 ILE260 ALA261 ILE262 HIS263 ASP264 LYS265 THR266 PRO267 GLN268 ILE269 GLY270 PHE271 THR272 GLU273 THR274 SER275 HIS276 ILE277 THR278 PRO279 SER280 ILE281 LEU282 ASP283 GLU284 GLU285 ALA286 LYS287 LYS288 LYS289 ILE290 VAL291 GLU292 ALA293 ALA294 LYS295 LYS296 ALA297 ASN298 GLU299 GLY300 LEU301 GLY302 LEU303 GLN304 ASN305 CYS306 ALA307 THR308 HIS309 THR310 GLU311 ILE312 LYS313 LEU314 MET315 LYS316 ASN317 ARG318 GLU319 PRO320 GLY321 LEU322 ILE323 GLU324 SER325 ALA326 ALA327 ARG328 PHE329 ALA330 GLY331 TRP332 ASN333 MET334 ILE335 PRO336 ASN337 ILE338 LYS339 LYS340 VAL341 PHE342 GLY343 LEU344 ASP345 MET346 ALA347 GLN348 LEU349 LEU350 LEU351 ASP352 VAL353 LEU354 CYS355 PHE356 GLY357 LYS358 ASP359 ALA360 ASP361 LEU362 PRO363 ASP364 GLY365 LEU366 LEU367 ASP368 GLN369 GLU370 PRO371 TYR372 TYR373 VAL374 ALA375 ASP376 CYS377 HIS378 LEU379 TYR380 PRO381 GLN382 HIS383 PHE384 LYS385 GLN386 ASN387 GLY388 GLN389 ILE390 PRO391 GLU392 THR393 ALA394 GLU395 ASP396 LEU397 VAL398 ILE399 GLU400 ALA401 ILE402 ASP403 ILE404 PRO405 ASP406 GLY407 LEU408 LEU409 LYS410 GLY411 ASP412 THR413 GLU414 ILE415 VAL416 SER417 PHE418 SER419 ALA420 ALA421 ALA422 PRO423 GLY424 THR425 SER426 VAL427 ASP428 LEU429 THR430 LEU431 PHE432 GLU433 ALA434 PHE435 ASN436 SER437 ILE438 ALA439 ALA440 PHE441 GLU442 LEU443 LYS444 GLY445 SER446 ASN447 SER448 GLN449 ASP450 VAL451 ALA452 GLU453 SER454 ILE455 ARG456 GLN457 ILE458 GLN459 GLN460 HIS461 ALA462 LYS463 LEU464 THR465 ALA466 LYS467 TYR468 VAL469 LEU470 PRO471 VAL472

Ligands
Unit 2 MG501 MG502 ADP503 P0D504

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany