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Sequence, Chains, Asymmetric and Biological Units

Title CARBAZOLE- AND OXYGEN-BOUND COMPLEX BETWEEN OXYGENASE AND FE IN CARBAZOLE 1,9A-DIOXYGENASE
Keywords CATALYTIC MECHANISM, ELECTRON TRANSFER COMPLEX, RIESKE NONHE OXYGENASE SYSTEM, TERMINAL OXYGENASE, RIESKE-TYPE FERREDOXI CARBAZOLE 1,9A-DIOXYGENASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3VMI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TERMINAL OXYGENASE COMPONENT OF CARBAZOLE  A 389 3136 0
2  Protein   TERMINAL OXYGENASE COMPONENT OF CARBAZOLE  B 388 3126 0
3  Protein   TERMINAL OXYGENASE COMPONENT OF CARBAZOLE  C 389 3136 0
4  Protein   FERREDOXIN COMPONENT OF CARBAZOLE  D 104 768 0
5  Protein   FERREDOXIN COMPONENT OF CARBAZOLE  E 107 794 0
6  Protein   FERREDOXIN COMPONENT OF CARBAZOLE  F 104 768 0
7  Ligand   TERMINAL OXYGENASE COMPONENT OF CARBAZOLE  A 3 0 7
8  Ligand   TERMINAL OXYGENASE COMPONENT OF CARBAZOLE  B 4 0 20
9  Ligand   TERMINAL OXYGENASE COMPONENT OF CARBAZOLE  C 4 0 20
10  Ligand   FERREDOXIN COMPONENT OF CARBAZOLE  D 1 0 4
11  Ligand   FERREDOXIN COMPONENT OF CARBAZOLE  E 1 0 4
12  Ligand   FERREDOXIN COMPONENT OF CARBAZOLE  F 1 0 4
13 Water     851 0 851
total       2346 11728 910
Proteins
Unit 1 MET1 ALA2 ASN3 VAL4 ASP5 GLU6 ALA7 ILE8 LEU9 LYS10 ARG11 VAL12 LYS13 GLY14 TRP15 ALA16 PRO17 TYR18 VAL19 ASP20 ALA21 LYS22 LEU23 GLY24 PHE25 ARG26 ASN27 HIS28 TRP29 TYR30 PRO31 VAL32 MET33 PHE34 SER35 LYS36 GLU37 ILE38 ASN39 GLU40 GLY41 GLU42 PRO43 LYS44 THR45 LEU46 LYS47 LEU48 LEU49 GLY50 GLU51 ASN52 LEU53 LEU54 VAL55 ASN56 ARG57 ILE58 ASP59 GLY60 LYS61 LEU62 TYR63 CYS64 LEU65 LYS66 ASP67 ARG68 CYS69 LEU70 HIS71 ARG72 GLY73 VAL74 GLN75 LEU76 SER77 VAL78 LYS79 VAL80 GLU81 CYS82 LYS83 THR84 LYS85 SER86 THR87 ILE88 THR89 CYS90 TRP91 TYR92 HIS93 ALA94 TRP95 THR96 TYR97 ARG98 TRP99 GLU100 ASP101 GLY102 VAL103 LEU104 CYS105 ASP106 ILE107 LEU108 THR109 ASN110 PRO111 THR112 SER113 ALA114 GLN115 ILE116 GLY117 ARG118 GLN119 LYS120 LEU121 LYS122 THR123 TYR124 PRO125 VAL126 GLN127 GLU128 ALA129 LYS130 GLY131 CYS132 VAL133 PHE134 ILE135 TYR136 LEU137 GLY138 ASP139 GLY140 ASP141 PRO142 PRO143 PRO144 LEU145 ALA146 ARG147 ASP148 THR149 PRO150 PRO151 ASN152 PHE153 LEU154 ASP155 ASP156 ASP157 MET158 GLU159 ILE160 LEU161 GLY162 LYS163 ASN164 GLN165 ILE166 ILE167 LYS168 SER169 ASN170 TRP171 ARG172 LEU173 ALA174 VAL175 GLU176 ASN177 GLY178 PHE179 ASP180 PRO181 SER182 HIS183 ILE184 TYR185 ILE186 HIS187 LYS188 ASP189 SER190 ILE191 LEU192 VAL193 LYS194 ASP195 ASN196 ASP197 LEU198 ALA199 LEU200 PRO201 LEU202 GLY203 PHE204 ALA205 PRO206 GLY207 GLY208 ASP209 ARG210 LYS211 GLN212 GLN213 THR214 ARG215 VAL216 VAL217 ASP218 ASP219 ASP220 VAL221 VAL222 GLY223 ARG224 LYS225 GLY226 VAL227 TYR228 ASP229 LEU230 ILE231 GLY232 GLU233 HIS234 GLY235 VAL236 PRO237 VAL238 PHE239 GLU240 GLY241 THR242 ILE243 GLY244 GLY245 GLU246 VAL247 VAL248 ARG249 GLU250 GLY251 ALA252 TYR253 GLY254 GLU255 LYS256 ILE257 VAL258 ALA259 ASN260 ASP261 ILE262 SER263 ILE264 TRP265 LEU266 PRO267 GLY268 VAL269 LEU270 LYS271 VAL272 ASN273 PRO274 PHE275 PRO276 ASN277 PRO278 ASP279 MET280 MET281 GLN282 PHE283 GLU284 TRP285 TYR286 VAL287 PRO288 ILE289 ASP290 GLU291 ASN292 THR293 HIS294 TYR295 TYR296 PHE297 GLN298 THR299 LEU300 GLY301 LYS302 PRO303 CYS304 ALA305 ASN306 ASP307 GLU308 GLU309 ARG310 LYS311 LYS312 TYR313 GLU314 GLN315 GLU316 PHE317 GLU318 SER319 LYS320 TRP321 LYS322 PRO323 MET324 ALA325 LEU326 GLU327 GLY328 PHE329 ASN330 ASN331 ASP332 ASP333 ILE334 TRP335 ALA336 ARG337 GLU338 ALA339 MET340 VAL341 ASP342 PHE343 TYR344 ALA345 ASP346 ASP347 LYS348 GLY349 TRP350 VAL351 ASN352 GLU353 ILE354 LEU355 PHE356 GLU357 SER358 ASP359 GLU360 ALA361 ILE362 VAL363 ALA364 TRP365 ARG366 LYS367 LEU368 ALA369 SER370 GLU371 HIS372 ASN373 GLN374 GLY375 ILE376 GLN377 THR378 GLN379 ALA380 HIS381 VAL382 SER383 GLY384 LEU385 GLU386 HIS387 HIS388 HIS389
Unit 2 MET1 ALA2 ASN3 VAL4 ASP5 GLU6 ALA7 ILE8 LEU9 LYS10 ARG11 VAL12 LYS13 GLY14 TRP15 ALA16 PRO17 TYR18 VAL19 ASP20 ALA21 LYS22 LEU23 GLY24 PHE25 ARG26 ASN27 HIS28 TRP29 TYR30 PRO31 VAL32 MET33 PHE34 SER35 LYS36 GLU37 ILE38 ASN39 GLU40 GLY41 GLU42 PRO43 LYS44 THR45 LEU46 LYS47 LEU48 LEU49 GLY50 GLU51 ASN52 LEU53 LEU54 VAL55 ASN56 ARG57 ILE58 ASP59 GLY60 LYS61 LEU62 TYR63 CYS64 LEU65 LYS66 ASP67 ARG68 CYS69 LEU70 HIS71 ARG72 GLY73 VAL74 GLN75 LEU76 SER77 VAL78 LYS79 VAL80 GLU81 CYS82 LYS83 THR84 LYS85 SER86 THR87 ILE88 THR89 CYS90 TRP91 TYR92 HIS93 ALA94 TRP95 THR96 TYR97 ARG98 TRP99 GLU100 ASP101 GLY102 VAL103 LEU104 CYS105 ASP106 ILE107 LEU108 THR109 ASN110 PRO111 THR112 SER113 ALA114 GLN115 ILE116 GLY117 ARG118 GLN119 LYS120 LEU121 LYS122 THR123 TYR124 PRO125 VAL126 GLN127 GLU128 ALA129 LYS130 GLY131 CYS132 VAL133 PHE134 ILE135 TYR136 LEU137 GLY138 ASP139 GLY140 ASP141 PRO142 PRO143 PRO144 LEU145 ALA146 ARG147 ASP148 THR149 PRO150 PRO151 ASN152 PHE153 LEU154 ASP155 ASP156 ASP157 MET158 GLU159 ILE160 LEU161 GLY162 LYS163 ASN164 GLN165 ILE166 ILE167 LYS168 SER169 ASN170 TRP171 ARG172 LEU173 ALA174 VAL175 GLU176 ASN177 GLY178 PHE179 ASP180 PRO181 SER182 HIS183 ILE184 TYR185 ILE186 HIS187 LYS188 ASP189 SER190 ILE191 LEU192 VAL193 LYS194 ASP195 ASN196 ASP197 LEU198 ALA199 LEU200 PRO201 LEU202 GLY203 PHE204 ALA205 PRO206 GLY207 GLY208 ASP209 ARG210 LYS211 GLN212 GLN213 THR214 ARG215 VAL216 VAL217 ASP218 ASP219 ASP220 VAL221 VAL222 GLY223 ARG224 LYS225 GLY226 VAL227 TYR228 ASP229 LEU230 ILE231 GLY232 GLU233 HIS234 GLY235 VAL236 PRO237 VAL238 PHE239 GLU240 GLY241 THR242 ILE243 GLY244 GLY245 GLU246 VAL247 VAL248 ARG249 GLU250 GLY251 ALA252 TYR253 GLY254 GLU255 LYS256 ILE257 VAL258 ALA259 ASN260 ASP261 ILE262 SER263 ILE264 TRP265 LEU266 PRO267 GLY268 VAL269 LEU270 LYS271 VAL272 ASN273 PRO274 PHE275 PRO276 ASN277 PRO278 ASP279 MET280 MET281 GLN282 PHE283 GLU284 TRP285 TYR286 VAL287 PRO288 ILE289 ASP290 GLU291 ASN292 THR293 HIS294 TYR295 TYR296 PHE297 GLN298 THR299 LEU300 GLY301 LYS302 PRO303 CYS304 ALA305 ASN306 ASP307 GLU308 GLU309 ARG310 LYS311 LYS312 TYR313 GLU314 GLN315 GLU316 PHE317 GLU318 SER319 LYS320 TRP321 LYS322 PRO323 MET324 ALA325 LEU326 GLU327 GLY328 PHE329 ASN330 ASN331 ASP332 ASP333 ILE334 TRP335 ALA336 ARG337 GLU338 ALA339 MET340 VAL341 ASP342 PHE343 TYR344 ALA345 ASP346 ASP347 LYS348 GLY349 TRP350 VAL351 ASN352 GLU353 ILE354 LEU355 PHE356 GLU357 SER358 ASP359 GLU360 ALA361 ILE362 VAL363 ALA364 TRP365 ARG366 LYS367 LEU368 ALA369 SER370 GLU371 HIS372 ASN373 GLN374 GLY375 ILE376 GLN377 THR378 GLN379 ALA380 HIS381 VAL382 SER383 GLY384 LEU385 GLU386 HIS387 HIS388
Unit 3 MET1 ALA2 ASN3 VAL4 ASP5 GLU6 ALA7 ILE8 LEU9 LYS10 ARG11 VAL12 LYS13 GLY14 TRP15 ALA16 PRO17 TYR18 VAL19 ASP20 ALA21 LYS22 LEU23 GLY24 PHE25 ARG26 ASN27 HIS28 TRP29 TYR30 PRO31 VAL32 MET33 PHE34 SER35 LYS36 GLU37 ILE38 ASN39 GLU40 GLY41 GLU42 PRO43 LYS44 THR45 LEU46 LYS47 LEU48 LEU49 GLY50 GLU51 ASN52 LEU53 LEU54 VAL55 ASN56 ARG57 ILE58 ASP59 GLY60 LYS61 LEU62 TYR63 CYS64 LEU65 LYS66 ASP67 ARG68 CYS69 LEU70 HIS71 ARG72 GLY73 VAL74 GLN75 LEU76 SER77 VAL78 LYS79 VAL80 GLU81 CYS82 LYS83 THR84 LYS85 SER86 THR87 ILE88 THR89 CYS90 TRP91 TYR92 HIS93 ALA94 TRP95 THR96 TYR97 ARG98 TRP99 GLU100 ASP101 GLY102 VAL103 LEU104 CYS105 ASP106 ILE107 LEU108 THR109 ASN110 PRO111 THR112 SER113 ALA114 GLN115 ILE116 GLY117 ARG118 GLN119 LYS120 LEU121 LYS122 THR123 TYR124 PRO125 VAL126 GLN127 GLU128 ALA129 LYS130 GLY131 CYS132 VAL133 PHE134 ILE135 TYR136 LEU137 GLY138 ASP139 GLY140 ASP141 PRO142 PRO143 PRO144 LEU145 ALA146 ARG147 ASP148 THR149 PRO150 PRO151 ASN152 PHE153 LEU154 ASP155 ASP156 ASP157 MET158 GLU159 ILE160 LEU161 GLY162 LYS163 ASN164 GLN165 ILE166 ILE167 LYS168 SER169 ASN170 TRP171 ARG172 LEU173 ALA174 VAL175 GLU176 ASN177 GLY178 PHE179 ASP180 PRO181 SER182 HIS183 ILE184 TYR185 ILE186 HIS187 LYS188 ASP189 SER190 ILE191 LEU192 VAL193 LYS194 ASP195 ASN196 ASP197 LEU198 ALA199 LEU200 PRO201 LEU202 GLY203 PHE204 ALA205 PRO206 GLY207 GLY208 ASP209 ARG210 LYS211 GLN212 GLN213 THR214 ARG215 VAL216 VAL217 ASP218 ASP219 ASP220 VAL221 VAL222 GLY223 ARG224 LYS225 GLY226 VAL227 TYR228 ASP229 LEU230 ILE231 GLY232 GLU233 HIS234 GLY235 VAL236 PRO237 VAL238 PHE239 GLU240 GLY241 THR242 ILE243 GLY244 GLY245 GLU246 VAL247 VAL248 ARG249 GLU250 GLY251 ALA252 TYR253 GLY254 GLU255 LYS256 ILE257 VAL258 ALA259 ASN260 ASP261 ILE262 SER263 ILE264 TRP265 LEU266 PRO267 GLY268 VAL269 LEU270 LYS271 VAL272 ASN273 PRO274 PHE275 PRO276 ASN277 PRO278 ASP279 MET280 MET281 GLN282 PHE283 GLU284 TRP285 TYR286 VAL287 PRO288 ILE289 ASP290 GLU291 ASN292 THR293 HIS294 TYR295 TYR296 PHE297 GLN298 THR299 LEU300 GLY301 LYS302 PRO303 CYS304 ALA305 ASN306 ASP307 GLU308 GLU309 ARG310 LYS311 LYS312 TYR313 GLU314 GLN315 GLU316 PHE317 GLU318 SER319 LYS320 TRP321 LYS322 PRO323 MET324 ALA325 LEU326 GLU327 GLY328 PHE329 ASN330 ASN331 ASP332 ASP333 ILE334 TRP335 ALA336 ARG337 GLU338 ALA339 MET340 VAL341 ASP342 PHE343 TYR344 ALA345 ASP346 ASP347 LYS348 GLY349 TRP350 VAL351 ASN352 GLU353 ILE354 LEU355 PHE356 GLU357 SER358 ASP359 GLU360 ALA361 ILE362 VAL363 ALA364 TRP365 ARG366 LYS367 LEU368 ALA369 SER370 GLU371 HIS372 ASN373 GLN374 GLY375 ILE376 GLN377 THR378 GLN379 ALA380 HIS381 VAL382 SER383 GLY384 LEU385 GLU386 HIS387 HIS388 HIS389
Unit 4 ILE4 TRP5 LEU6 LYS7 VAL8 CYS9 ALA10 ALA11 SER12 ASP13 MET14 GLN15 PRO16 GLY17 THR18 ILE19 ARG20 ARG21 VAL22 ASN23 ARG24 VAL25 GLY26 ALA27 ALA28 PRO29 LEU30 ALA31 VAL32 TYR33 ARG34 VAL35 GLY36 ASP37 GLN38 PHE39 TYR40 ALA41 THR42 GLU43 ASP44 THR45 CYS46 THR47 HIS48 GLY49 ILE50 ALA51 SER52 LEU53 SER54 GLU55 GLY56 THR57 LEU58 ASP59 GLY60 ASP61 VAL62 ILE63 GLU64 CYS65 PRO66 PHE67 HIS68 GLY69 GLY70 ALA71 PHE72 ASN73 VAL74 CYS75 THR76 GLY77 MET78 PRO79 ALA80 SER81 SER82 PRO83 CYS84 THR85 VAL86 PRO87 LEU88 GLY89 VAL90 PHE91 GLU92 VAL93 GLU94 VAL95 LYS96 GLU97 GLY98 GLU99 VAL100 TYR101 VAL102 ALA103 GLY104 GLU105 LYS106 LYS107
Unit 5 GLN3 ILE4 TRP5 LEU6 LYS7 VAL8 CYS9 ALA10 ALA11 SER12 ASP13 MET14 GLN15 PRO16 GLY17 THR18 ILE19 ARG20 ARG21 VAL22 ASN23 ARG24 VAL25 GLY26 ALA27 ALA28 PRO29 LEU30 ALA31 VAL32 TYR33 ARG34 VAL35 GLY36 ASP37 GLN38 PHE39 TYR40 ALA41 THR42 GLU43 ASP44 THR45 CYS46 THR47 HIS48 GLY49 ILE50 ALA51 SER52 LEU53 SER54 GLU55 GLY56 THR57 LEU58 ASP59 GLY60 ASP61 VAL62 ILE63 GLU64 CYS65 PRO66 PHE67 HIS68 GLY69 GLY70 ALA71 PHE72 ASN73 VAL74 CYS75 THR76 GLY77 MET78 PRO79 ALA80 SER81 SER82 PRO83 CYS84 THR85 VAL86 PRO87 LEU88 GLY89 VAL90 PHE91 GLU92 VAL93 GLU94 VAL95 LYS96 GLU97 GLY98 GLU99 VAL100 TYR101 VAL102 ALA103 GLY104 GLU105 LYS106 LYS107 LEU108 GLU109
Unit 6 ILE4 TRP5 LEU6 LYS7 VAL8 CYS9 ALA10 ALA11 SER12 ASP13 MET14 GLN15 PRO16 GLY17 THR18 ILE19 ARG20 ARG21 VAL22 ASN23 ARG24 VAL25 GLY26 ALA27 ALA28 PRO29 LEU30 ALA31 VAL32 TYR33 ARG34 VAL35 GLY36 ASP37 GLN38 PHE39 TYR40 ALA41 THR42 GLU43 ASP44 THR45 CYS46 THR47 HIS48 GLY49 ILE50 ALA51 SER52 LEU53 SER54 GLU55 GLY56 THR57 LEU58 ASP59 GLY60 ASP61 VAL62 ILE63 GLU64 CYS65 PRO66 PHE67 HIS68 GLY69 GLY70 ALA71 PHE72 ASN73 VAL74 CYS75 THR76 GLY77 MET78 PRO79 ALA80 SER81 SER82 PRO83 CYS84 THR85 VAL86 PRO87 LEU88 GLY89 VAL90 PHE91 GLU92 VAL93 GLU94 VAL95 LYS96 GLU97 GLY98 GLU99 VAL100 TYR101 VAL102 ALA103 GLY104 GLU105 LYS106 LYS107
Ligands
Unit 7 FES401 FE2501 OXY601
Unit 8 FES401 FE2501 OXY602 9CA2001
Unit 9 FES401 FE2501 OXY603 9CA2002
Unit 10 FES201
Unit 11 FES201
Unit 12 FES201
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany