![]() |
[Image Library Home] | [Image Library Entry] |
Title | CRYSTAL STRUCTURE OF DNA-GLYCOSYLASE BOUND TO DNA CONTAINING HYDROXYURACIL | |
Keywords | DNA GLYCOSYLASE, HNEIL1 ORTHOLOG, DNA LESION, 5-HYDROXYURACI ZINCLESS FINGER, DNA BINDING, HYDROLASE-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3VK7 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE | A | 288 | 2370 | 0 |
2 | Protein | PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE | B | 286 | 2353 | 0 |
3 | Other macromolecule | C | 13 | 270 | 0 | |
4 | Other macromolecule | D | 13 | 238 | 20 | |
5 | Other macromolecule | E | 13 | 270 | 0 | |
6 | Other macromolecule | F | 13 | 238 | 20 | |
7 | Ligand | PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE | B | 1 | 0 | 3 |
8 | Ligand | D | 1 | 0 | 3 | |
9 | Water | 456 | 0 | 456 | ||
total | 1084 | 5739 | 502 |
Unit 1 | PRO2 GLN3 GLY4 PRO5 GLU6 VAL7 ALA8 LEU9 THR10 ALA11 ASP12 ILE13 LEU14 GLU15 LYS16 TYR17 PHE18 LYS19 GLY20 LYS21 THR22 LEU23 GLU24 TYR25 ILE26 ASP27 PHE28 ILE29 SER30 GLY31 ARG32 TYR33 SER34 LYS35 SER36 GLU37 PRO38 GLU39 GLY40 TYR41 ASP42 ASP43 PHE44 ILE45 ALA46 ASN47 LEU48 PRO49 LEU50 LYS51 VAL52 SER53 ASN54 VAL55 ASP56 THR57 LYS58 GLY59 LYS60 PHE61 LEU62 TRP63 PHE64 GLU65 LEU66 PHE67 ASP68 PRO69 ASN70 ASP71 LYS72 SER73 ASN74 LYS75 TRP76 TYR77 ILE78 TRP79 ASN80 THR81 PHE82 GLY83 LEU84 THR85 GLY86 MET87 TRP88 SER89 LEU90 PHE91 GLU92 ALA93 LYS94 TYR95 THR96 ARG97 ALA98 VAL99 LEU100 SER101 PHE102 ASP103 ASN104 GLU105 LEU106 MET107 ALA108 TYR109 PHE110 SER111 ASP112 MET113 ARG114 ASN115 PHE116 GLY117 THR118 PHE119 LYS120 PHE121 SER122 ASN123 SER124 GLU125 LYS126 GLU127 LEU128 LYS129 ARG130 LYS131 LEU132 ASN133 GLU134 LEU135 GLY136 PRO137 ASP138 PHE139 LEU140 LYS141 ASN142 ASP143 ASP144 ILE145 ASP146 ILE147 SER148 LYS149 ILE150 LYS151 LYS152 TYR153 LYS154 GLN155 PRO156 ILE157 VAL158 ALA159 LEU160 LEU161 MET162 ASP163 GLN164 LYS165 LYS166 ILE167 GLY168 SER169 GLY170 LEU171 GLY172 ASN173 TYR174 LEU175 VAL176 ALA177 GLU178 ILE179 LEU180 TYR181 ARG182 ALA183 LYS184 ILE185 ASP186 PRO187 HIS188 LYS189 LEU190 GLY191 SER192 ASN193 LEU194 THR195 ASP196 GLN197 GLU198 ILE199 GLU200 ASN201 LEU202 TRP203 TYR204 TRP205 ILE206 LYS207 TYR208 GLU209 THR210 LYS211 LEU212 ALA213 TYR214 ASP215 SER216 ASN217 HIS218 ILE219 GLY220 TYR221 MET222 VAL223 ASN224 LEU225 GLU226 ASN227 GLU228 SER229 SER230 LYS231 ILE232 GLY233 ARG234 LYS235 ASN236 TYR237 HIS238 PRO239 ASN240 ILE241 HIS242 PRO243 THR244 GLU245 LYS246 GLU247 PHE248 ASP249 PHE250 LEU251 VAL252 TYR253 ARG254 LYS255 LYS256 LYS257 ASP258 PRO259 ASN260 GLY261 ASN262 LYS263 VAL264 ILE265 ALA266 ASP267 LYS268 ILE269 ILE270 GLY271 SER272 GLY273 LYS274 ASN275 LYS276 ARG277 THR278 THR279 TYR280 TRP281 ALA282 PRO283 ALA284 ILE285 GLN286 LYS287 LEU288 GLU289 |
Unit 2 | PRO2 GLN3 GLY4 PRO5 GLU6 VAL7 ALA8 LEU9 THR10 ALA11 ASP12 ILE13 LEU14 GLU15 LYS16 TYR17 PHE18 LYS19 GLY20 LYS21 THR22 LEU23 GLU24 TYR25 ILE26 ASP27 PHE28 ILE29 SER30 GLY31 ARG32 TYR33 SER34 LYS35 SER36 GLU37 PRO38 GLU39 GLY40 TYR41 ASP42 ASP43 PHE44 ILE45 ALA46 ASN47 LEU48 PRO49 LEU50 LYS51 VAL52 SER53 ASN54 VAL55 ASP56 THR57 LYS58 GLY59 LYS60 PHE61 LEU62 TRP63 PHE64 GLU65 LEU66 PHE67 ASP68 PRO69 ASN70 ASP71 LYS72 SER73 ASN74 LYS75 TRP76 TYR77 ILE78 TRP79 ASN80 THR81 PHE82 GLY83 LEU84 THR85 GLY86 MET87 TRP88 SER89 LEU90 PHE91 GLU92 ALA93 LYS94 TYR95 THR96 ARG97 ALA98 VAL99 LEU100 SER101 PHE102 ASP103 ASN104 GLU105 LEU106 MET107 ALA108 TYR109 PHE110 SER111 ASP112 MET113 ARG114 ASN115 PHE116 GLY117 THR118 PHE119 LYS120 PHE121 SER122 ASN123 SER124 GLU125 LYS126 GLU127 LEU128 LYS129 ARG130 LYS131 LEU132 ASN133 GLU134 LEU135 GLY136 PRO137 ASP138 PHE139 LEU140 LYS141 ASN142 ASP143 ASP144 ILE145 ASP146 ILE147 SER148 LYS149 ILE150 LYS151 LYS152 TYR153 LYS154 GLN155 PRO156 ILE157 VAL158 ALA159 LEU160 LEU161 MET162 ASP163 GLN164 LYS165 LYS166 ILE167 GLY168 SER169 GLY170 LEU171 GLY172 ASN173 TYR174 LEU175 VAL176 ALA177 GLU178 ILE179 LEU180 TYR181 ARG182 ALA183 LYS184 ILE185 ASP186 PRO187 HIS188 LYS189 LEU190 GLY191 SER192 ASN193 LEU194 THR195 ASP196 GLN197 GLU198 ILE199 GLU200 ASN201 LEU202 TRP203 TYR204 TRP205 ILE206 LYS207 TYR208 GLU209 THR210 LYS211 LEU212 ALA213 TYR214 ASP215 SER216 ASN217 HIS218 ILE219 GLY220 TYR221 MET222 VAL223 ASN224 LEU225 GLU226 ASN227 GLU228 SER229 SER230 LYS231 ILE232 GLY233 ARG234 LYS235 ASN236 TYR237 HIS238 PRO239 ASN240 ILE241 HIS242 PRO243 THR244 GLU245 LYS246 GLU247 PHE248 ASP249 PHE250 LEU251 VAL252 TYR253 ARG254 LYS255 LYS256 LYS257 ASP258 PRO259 ASN260 GLY261 ASN262 LYS263 VAL264 ILE265 ALA266 ASP267 LYS268 ILE269 ILE270 GLY271 SER272 GLY273 LYS274 ASN275 LYS276 ARG277 THR278 THR279 TYR280 TRP281 ALA282 PRO283 ALA284 ILE285 GLN286 LYS287 |
Unit 3 | DG1 DT2 DA3 DG4 DA5 DC6 DG7 DT8 DG9 DG10 DA11 DC12 DG13 |
Unit 4 | DC14 DG15 DT16 DC17 DC18 DA19 OHU20 DG21 DT22 DC23 DT24 DA25 DC26 |
Unit 5 | DG1 DT2 DA3 DG4 DA5 DC6 DG7 DT8 DG9 DG10 DA11 DC12 DG13 |
Unit 6 | DC14 DG15 DT16 DC17 DC18 DA19 OHU20 DG21 DT22 DC23 DT24 DA25 DC26 |
Unit 7 | FMT296 |
Unit 8 | FMT1 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |