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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DIME-BIOTIN-AVIDIN COMPLEX
Keywords BETA BARREL, BIOTIN-BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3VHH     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AVIDIN  A 123 964 0
2  Protein   AVIDIN  B 121 948 0
3  Protein   AVIDIN  C 123 961 0
4  Protein   AVIDIN  D 121 948 0
5  Ligand   AVIDIN  A 4 0 42
6  Ligand   AVIDIN  B 3 0 37
7  Ligand   AVIDIN  C 4 0 42
8  Ligand   AVIDIN  D 3 0 37
9 Water     123 0 123
total       625 3821 281

Proteins
Unit 1 ALA1 ARG2 LYS3 CYS4 SER5 LEU6 THR7 GLY8 LYS9 TRP10 THR11 ASN12 ASP13 LEU14 GLY15 SER16 ASN17 MET18 THR19 ILE20 GLY21 ALA22 VAL23 ASN24 SER25 ARG26 GLY27 GLU28 PHE29 THR30 GLY31 THR32 TYR33 ILE34 THR35 ALA36 VAL37 THR38 ALA39 THR40 SER41 ASN42 GLU43 ILE44 LYS45 GLU46 SER47 PRO48 LEU49 HIS50 GLY51 THR52 GLN53 ASN54 THR55 ILE56 ASN57 LYS58 ARG59 THR60 GLN61 PRO62 THR63 PHE64 GLY65 PHE66 THR67 VAL68 ASN69 TRP70 LYS71 PHE72 SER73 GLU74 SER75 THR76 THR77 VAL78 PHE79 THR80 GLY81 GLN82 CYS83 PHE84 ILE85 ASP86 ARG87 ASN88 GLY89 LYS90 GLU91 VAL92 LEU93 LYS94 THR95 MET96 TRP97 LEU98 LEU99 ARG100 SER101 SER102 VAL103 ASN104 ASP105 ILE106 GLY107 ASP108 ASP109 TRP110 LYS111 ALA112 THR113 ARG114 VAL115 GLY116 ILE117 ASN118 ILE119 PHE120 THR121 ARG122 LEU123
Unit 2 LYS3 CYS4 SER5 LEU6 THR7 GLY8 LYS9 TRP10 THR11 ASN12 ASP13 LEU14 GLY15 SER16 ASN17 MET18 THR19 ILE20 GLY21 ALA22 VAL23 ASN24 SER25 ARG26 GLY27 GLU28 PHE29 THR30 GLY31 THR32 TYR33 ILE34 THR35 ALA36 VAL37 THR38 ALA39 THR40 SER41 ASN42 GLU43 ILE44 LYS45 GLU46 SER47 PRO48 LEU49 HIS50 GLY51 THR52 GLN53 ASN54 THR55 ILE56 ASN57 LYS58 ARG59 THR60 GLN61 PRO62 THR63 PHE64 GLY65 PHE66 THR67 VAL68 ASN69 TRP70 LYS71 PHE72 SER73 GLU74 SER75 THR76 THR77 VAL78 PHE79 THR80 GLY81 GLN82 CYS83 PHE84 ILE85 ASP86 ARG87 ASN88 GLY89 LYS90 GLU91 VAL92 LEU93 LYS94 THR95 MET96 TRP97 LEU98 LEU99 ARG100 SER101 SER102 VAL103 ASN104 ASP105 ILE106 GLY107 ASP108 ASP109 TRP110 LYS111 ALA112 THR113 ARG114 VAL115 GLY116 ILE117 ASN118 ILE119 PHE120 THR121 ARG122 LEU123
Unit 3 ALA1 ARG2 LYS3 CYS4 SER5 LEU6 THR7 GLY8 LYS9 TRP10 THR11 ASN12 ASP13 LEU14 GLY15 SER16 ASN17 MET18 THR19 ILE20 GLY21 ALA22 VAL23 ASN24 SER25 ARG26 GLY27 GLU28 PHE29 THR30 GLY31 THR32 TYR33 ILE34 THR35 ALA36 VAL37 THR38 ALA39 THR40 SER41 ASN42 GLU43 ILE44 LYS45 GLU46 SER47 PRO48 LEU49 HIS50 GLY51 THR52 GLN53 ASN54 THR55 ILE56 ASN57 LYS58 ARG59 THR60 GLN61 PRO62 THR63 PHE64 GLY65 PHE66 THR67 VAL68 ASN69 TRP70 LYS71 PHE72 SER73 GLU74 SER75 THR76 THR77 VAL78 PHE79 THR80 GLY81 GLN82 CYS83 PHE84 ILE85 ASP86 ARG87 ASN88 GLY89 LYS90 GLU91 VAL92 LEU93 LYS94 THR95 MET96 TRP97 LEU98 LEU99 ARG100 SER101 SER102 VAL103 ASN104 ASP105 ILE106 GLY107 ASP108 ASP109 TRP110 LYS111 ALA112 THR113 ARG114 VAL115 GLY116 ILE117 ASN118 ILE119 PHE120 THR121 ARG122 LEU123
Unit 4 LYS3 CYS4 SER5 LEU6 THR7 GLY8 LYS9 TRP10 THR11 ASN12 ASP13 LEU14 GLY15 SER16 ASN17 MET18 THR19 ILE20 GLY21 ALA22 VAL23 ASN24 SER25 ARG26 GLY27 GLU28 PHE29 THR30 GLY31 THR32 TYR33 ILE34 THR35 ALA36 VAL37 THR38 ALA39 THR40 SER41 ASN42 GLU43 ILE44 LYS45 GLU46 SER47 PRO48 LEU49 HIS50 GLY51 THR52 GLN53 ASN54 THR55 ILE56 ASN57 LYS58 ARG59 THR60 GLN61 PRO62 THR63 PHE64 GLY65 PHE66 THR67 VAL68 ASN69 TRP70 LYS71 PHE72 SER73 GLU74 SER75 THR76 THR77 VAL78 PHE79 THR80 GLY81 GLN82 CYS83 PHE84 ILE85 ASP86 ARG87 ASN88 GLY89 LYS90 GLU91 VAL92 LEU93 LYS94 THR95 MET96 TRP97 LEU98 LEU99 ARG100 SER101 SER102 VAL103 ASN104 ASP105 ILE106 GLY107 ASP108 ASP109 TRP110 LYS111 ALA112 THR113 ARG114 VAL115 GLY116 ILE117 ASN118 ILE119 PHE120 THR121 ARG122 LEU123

Ligands
Unit 5 VHH1124 NAG1125 SO41126 SO41127
Unit 6 VHH1124 NAG1125 SO41126
Unit 7 VHH1124 NAG1125 SO41126 SO41127
Unit 8 VHH1124 NAG1125 SO41126

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany