3VD8 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN AIM2 PYD DOMAIN WITH MBP FUSION
• Keywords: MBP/PYD/DD, SIGNAL TRANSDUCTION, INFLAMMASOME, SUGAR BINDING SIGNALING PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3VD8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MALTOSE-BINDING PERIPLASMIC PROTEIN, INTERFERON-I PROTEIN AIM2	A	467	3630	0
2	Ligand		B	4	0	45
3	Ligand	MALTOSE-BINDING PERIPLASMIC PROTEIN, INTERFERON-I PROTEIN AIM2	A	8	0	20
4	Water			325	0	325
total				804	3630	390

Proteins

Unit 1

LYS 1 ILE 2 GLU 3 GLU 4 GLY 5 LYS 6 LEU 7 VAL 8 ILE 9 TRP 10 ILE 11 ASN 12 GLY 13 ASP 14 LYS 15 GLY 16 TYR 17 ASN 18 GLY 19 LEU 20 ALA 21 GLU 22 VAL 23 GLY 24 LYS 25 LYS 26 PHE 27 GLU 28 LYS 29 ASP 30 THR 31 GLY 32 ILE 33 LYS 34 VAL 35 THR 36 VAL 37 GLU 38 HIS 39 PRO 40 ASP 41 LYS 42 LEU 43 GLU 44 GLU 45 LYS 46 PHE 47 PRO 48 GLN 49 VAL 50 ALA 51 ALA 52 THR 53 GLY 54 ASP 55 GLY 56 PRO 57 ASP 58 ILE 59 ILE 60 PHE 61 TRP 62 ALA 63 HIS 64 ASP 65 ARG 66 PHE 67 GLY 68 GLY 69 TYR 70 ALA 71 GLN 72 SER 73 GLY 74 LEU 75 LEU 76 ALA 77 GLU 78 ILE 79 THR 80 PRO 81 ALA 82 ALA 83 ALA 84 PHE 85 GLN 86 ASP 87 LYS 88 LEU 89 TYR 90 PRO 91 PHE 92 THR 93 TRP 94 ASP 95 ALA 96 VAL 97 ARG 98 TYR 99 ASN 100 GLY 101 LYS 102 LEU 103 ILE 104 ALA 105 TYR 106 PRO 107 ILE 108 ALA 109 VAL 110 GLU 111 ALA 112 LEU 113 SER 114 LEU 115 ILE 116 TYR 117 ASN 118 LYS 119 ASP 120 LEU 121 LEU 122 PRO 123 ASN 124 PRO 125 PRO 126 LYS 127 THR 128 TRP 129 GLU 130 GLU 131 ILE 132 PRO 133 ALA 134 LEU 135 ASP 136 LYS 137 GLU 138 LEU 139 LYS 140 ALA 141 LYS 142 GLY 143 LYS 144 SER 145 ALA 146 LEU 147 MET 148 PHE 149 ASN 150 LEU 151 GLN 152 GLU 153 PRO 154 TYR 155 PHE 156 THR 157 TRP 158 PRO 159 LEU 160 ILE 161 ALA 162 ALA 163 ASP 164 GLY 165 GLY 166 TYR 167 ALA 168 PHE 169 LYS 170 TYR 171 ALA 172 ALA 173 GLY 174 LYS 175 TYR 176 ASP 177 ILE 178 LYS 179 ASP 180 VAL 181 GLY 182 VAL 183 ASP 184 ASN 185 ALA 186 GLY 187 ALA 188 LYS 189 ALA 190 GLY 191 LEU 192 THR 193 PHE 194 LEU 195 VAL 196 ASP 197 LEU 198 ILE 199 LYS 200 ASN 201 LYS 202 HIS 203 MET 204 ASN 205 ALA 206 ASP 207 THR 208 ASP 209 TYR 210 SER 211 ILE 212 ALA 213 GLU 214 ALA 215 ALA 216 PHE 217 ASN 218 LYS 219 GLY 220 GLU 221 THR 222 ALA 223 MET 224 THR 225 ILE 226 ASN 227 GLY 228 PRO 229 TRP 230 ALA 231 TRP 232 SER 233 ASN 234 ILE 235 ASP 236 THR 237 SER 238 ALA 239 VAL 240 ASN 241 TYR 242 GLY 243 VAL 244 THR 245 VAL 246 LEU 247 PRO 248 THR 249 PHE 250 LYS 251 GLY 252 GLN 253 PRO 254 SER 255 LYS 256 PRO 257 PHE 258 VAL 259 GLY 260 VAL 261 LEU 262 SER 263 ALA 264 GLY 265 ILE 266 ASN 267 ALA 268 ALA 269 SER 270 PRO 271 ASN 272 LYS 273 GLU 274 LEU 275 ALA 276 LYS 277 GLU 278 PHE 279 LEU 280 GLU 281 ASN 282 TYR 283 LEU 284 LEU 285 THR 286 ASP 287 GLU 288 GLY 289 LEU 290 GLU 291 ALA 292 VAL 293 ASN 294 LYS 295 ASP 296 LYS 297 PRO 298 LEU 299 GLY 300 ALA 301 VAL 302 ALA 303 LEU 304 LYS 305 SER 306 TYR 307 GLU 308 GLU 309 GLU 310 LEU 311 ALA 312 LYS 313 ASP 314 PRO 315 ARG 316 ILE 317 ALA 318 ALA 319 THR 320 MET 321 GLU 322 ASN 323 ALA 324 GLN 325 LYS 326 GLY 327 GLU 328 ILE 329 MET 330 PRO 331 ASN 332 ILE 333 PRO 334 GLN 335 MET 336 SER 337 ALA 338 PHE 339 TRP 340 TYR 341 ALA 342 VAL 343 ARG 344 THR 345 ALA 346 VAL 347 ILE 348 ASN 349 ALA 350 ALA 351 SER 352 GLY 353 ARG 354 GLN 355 THR 356 VAL 357 ASP 358 ALA 359 ALA 360 LEU 361 ALA 362 ALA 363 ALA 364 GLN 365 THR 366 ASN 367 ALA 368 VAL 369 ASP 370 MET 1001 GLU 1002 SER 1003 LYS 1004 TYR 1005 LYS 1006 GLU 1007 ILE 1008 LEU 1009 LEU 1010 LEU 1011 THR 1012 GLY 1013 LEU 1014 ASP 1015 ASN 1016 ILE 1017 THR 1018 ASP 1019 GLU 1020 GLU 1021 LEU 1022 ASP 1023 ARG 1024 PHE 1025 LYS 1026 PHE 1027 PHE 1028 LEU 1029 SER 1030 ASP 1031 GLU 1032 PHE 1033 ASN 1034 ILE 1035 ALA 1036 THR 1037 GLY 1038 LYS 1039 LEU 1040 HIS 1041 THR 1042 ALA 1043 ASN 1044 ARG 1045 ILE 1046 GLN 1047 VAL 1048 ALA 1049 THR 1050 LEU 1051 MET 1052 ILE 1053 GLN 1054 ASN 1055 ALA 1056 GLY 1057 ALA 1058 VAL 1059 SER 1060 ALA 1061 VAL 1062 MET 1063 LYS 1064 THR 1065 ILE 1066 ARG 1067 ILE 1068 PHE 1069 GLN 1070 LYS 1071 LEU 1072 ASN 1073 TYR 1074 MET 1075 LEU 1076 LEU 1077 ALA 1078 LYS 1079 ARG 1080 LEU 1081 GLN 1082 GLU 1083 GLU 1084 LYS 1085 GLU 1086 LYS 1087 VAL 1088 ASP 1089 LYS 1090 GLN 1091 TYR 1092 LYS 1093 SER 1094 VAL 1095 THR 1096 LYS 1097

Ligands

Unit 2	GLC 1 GLC 2 GLC 3 GLC 4
Unit 3	EDO 1201 EDO 1202 EDO 1203 EDO 1204 K 1206 K 1207 K 1208 K 1209