3VBF - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF FORMALDEHYDE TREATED HUMAN ENTEROVIRUS GROUP I23)
• Keywords: VIRUS, HAND-FOOT-AND-MOUTH DISEASE, ENTEROVIRUS UNCOATING, P FACTOR, ADAPTOR-SENSOR, ICOSAHEDRAL VIRUS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3VBF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GENOME POLYPROTEIN, CAPSID PROTEIN VP1	A	297	2300	0
2	Protein	GENOME POLYPROTEIN, CAPSID PROTEIN VP2	B	245	1896	0
3	Protein	GENOME POLYPROTEIN, CAPSID PROTEIN VP3	C	242	1863	0
4	Protein	GENOME POLYPROTEIN, CAPSID PROTEIN VP4	D	58	449	0
5	Ligand	GENOME POLYPROTEIN, CAPSID PROTEIN VP1	A	4	0	46
6	Ligand	GENOME POLYPROTEIN, CAPSID PROTEIN VP3	C	2	0	2
7	Water			282	0	282
total				1130	6508	330

Proteins

Unit 1	GLY 1 ASP 2 ARG 3 VAL 4 ALA 5 ASP 6 VAL 7 ILE 8 GLU 9 SER 10 SER 11 ILE 12 GLY 13 ASP 14 SER 15 VAL 16 SER 17 ARG 18 ALA 19 LEU 20 THR 21 HIS 22 ALA 23 LEU 24 PRO 25 ALA 26 PRO 27 THR 28 GLY 29 GLN 30 ASN 31 THR 32 GLN 33 VAL 34 SER 35 SER 36 HIS 37 ARG 38 LEU 39 ASP 40 THR 41 GLY 42 LYS 43 VAL 44 PRO 45 ALA 46 LEU 47 GLN 48 ALA 49 ALA 50 GLU 51 ILE 52 GLY 53 ALA 54 SER 55 SER 56 ASN 57 ALA 58 SER 59 ASP 60 GLU 61 SER 62 MET 63 ILE 64 GLU 65 THR 66 ARG 67 CYS 68 VAL 69 LEU 70 ASN 71 SER 72 HIS 73 SER 74 THR 75 ALA 76 GLU 77 THR 78 THR 79 LEU 80 ASP 81 SER 82 PHE 83 PHE 84 SER 85 ARG 86 ALA 87 GLY 88 LEU 89 VAL 90 GLY 91 GLU 92 ILE 93 ASP 94 LEU 95 PRO 96 LEU 97 LYS 98 GLY 99 THR 100 THR 101 ASN 102 PRO 103 ASN 104 GLY 105 TYR 106 ALA 107 ASN 108 TRP 109 ASP 110 ILE 111 ASP 112 ILE 113 THR 114 GLY 115 TYR 116 ALA 117 GLN 118 MET 119 ARG 120 ARG 121 LYS 122 VAL 123 GLU 124 LEU 125 PHE 126 THR 127 TYR 128 MET 129 ARG 130 PHE 131 ASP 132 ALA 133 GLU 134 PHE 135 THR 136 PHE 137 VAL 138 ALA 139 CYS 140 THR 141 PRO 142 THR 143 GLY 144 GLU 145 VAL 146 VAL 147 PRO 148 GLN 149 LEU 150 LEU 151 GLN 152 TYR 153 MET 154 PHE 155 VAL 156 PRO 157 PRO 158 GLY 159 ALA 160 PRO 161 LYS 162 PRO 163 ASP 164 SER 165 ARG 166 GLU 167 SER 168 LEU 169 ALA 170 TRP 171 GLN 172 THR 173 ALA 174 THR 175 ASN 176 PRO 177 SER 178 VAL 179 PHE 180 VAL 181 LYS 182 LEU 183 SER 184 ASP 185 PRO 186 PRO 187 ALA 188 GLN 189 VAL 190 SER 191 VAL 192 PRO 193 PHE 194 MET 195 SER 196 PRO 197 ALA 198 SER 199 ALA 200 TYR 201 GLN 202 TRP 203 PHE 204 TYR 205 ASP 206 GLY 207 TYR 208 PRO 209 THR 210 PHE 211 GLY 212 GLU 213 HIS 214 LYS 215 GLN 216 GLU 217 LYS 218 ASP 219 LEU 220 GLU 221 TYR 222 GLY 223 ALA 224 MET 225 PRO 226 ASN 227 ASN 228 MET 229 MET 230 GLY 231 THR 232 PHE 233 SER 234 VAL 235 ARG 236 THR 237 VAL 238 GLY 239 THR 240 SER 241 LYS 242 SER 243 LYS 244 TYR 245 PRO 246 LEU 247 VAL 248 VAL 249 ARG 250 ILE 251 TYR 252 MET 253 ARG 254 MET 255 LYS 256 HIS 257 VAL 258 ARG 259 ALA 260 TRP 261 ILE 262 PRO 263 ARG 264 PRO 265 MET 266 ARG 267 ASN 268 GLN 269 ASN 270 TYR 271 LEU 272 PHE 273 LYS 274 ALA 275 ASN 276 PRO 277 ASN 278 TYR 279 ALA 280 GLY 281 ASN 282 SER 283 ILE 284 LYS 285 PRO 286 THR 287 GLY 288 ALA 289 SER 290 ARG 291 THR 292 ALA 293 ILE 294 THR 295 THR 296 LEU 297
Unit 2	SER 10 ASP 11 ARG 12 VAL 13 ALA 14 GLN 15 LEU 16 THR 17 ILE 18 GLY 19 ASN 20 SER 21 THR 22 ILE 23 THR 24 THR 25 GLN 26 GLU 27 ALA 28 ALA 29 ASN 30 ILE 31 ILE 32 VAL 33 GLY 34 TYR 35 GLY 36 GLU 37 TRP 38 PRO 39 SER 40 TYR 41 CYS 42 SER 43 ASP 44 SER 45 ASP 46 ALA 47 THR 48 ALA 49 VAL 50 ASP 51 LYS 52 PRO 53 THR 54 ARG 55 PRO 56 ASP 57 VAL 58 SER 59 VAL 60 ASN 61 ARG 62 PHE 63 TYR 64 THR 65 LEU 66 ASP 67 THR 68 LYS 69 LEU 70 TRP 71 GLU 72 LYS 73 SER 74 SER 75 LYS 76 GLY 77 TRP 78 TYR 79 TRP 80 LYS 81 PHE 82 PRO 83 ASP 84 VAL 85 LEU 86 THR 87 GLU 88 THR 89 GLY 90 VAL 91 PHE 92 GLY 93 GLN 94 ASN 95 ALA 96 GLN 97 PHE 98 HIS 99 TYR 100 LEU 101 TYR 102 ARG 103 SER 104 GLY 105 PHE 106 CYS 107 ILE 108 HIS 109 VAL 110 GLN 111 CYS 112 ASN 113 ALA 114 SER 115 LYS 116 PHE 117 HIS 118 GLN 119 GLY 120 ALA 121 LEU 122 LEU 123 VAL 124 ALA 125 VAL 126 LEU 127 PRO 128 GLU 129 TYR 130 VAL 131 ILE 132 GLY 133 THR 134 VAL 135 ALA 136 GLY 137 GLY 138 THR 139 GLY 140 THR 141 GLU 142 ASP 143 THR 144 HIS 145 PRO 146 PRO 147 TYR 148 LYS 149 GLN 150 THR 151 GLN 152 PRO 153 GLY 154 ALA 155 ASP 156 GLY 157 PHE 158 GLU 159 LEU 160 GLN 161 HIS 162 PRO 163 TYR 164 VAL 165 LEU 166 ASP 167 ALA 168 GLY 169 ILE 170 PRO 171 ILE 172 SER 173 GLN 174 LEU 175 THR 176 VAL 177 CYS 178 PRO 179 HIS 180 GLN 181 TRP 182 ILE 183 ASN 184 LEU 185 ARG 186 THR 187 ASN 188 ASN 189 CYS 190 ALA 191 THR 192 ILE 193 ILE 194 VAL 195 PRO 196 TYR 197 ILE 198 ASN 199 ALA 200 LEU 201 PRO 202 PHE 203 ASP 204 SER 205 ALA 206 LEU 207 ASN 208 HIS 209 CYS 210 ASN 211 PHE 212 GLY 213 LEU 214 LEU 215 VAL 216 VAL 217 PRO 218 ILE 219 SER 220 PRO 221 LEU 222 ASP 223 TYR 224 ASP 225 GLN 226 GLY 227 ALA 228 THR 229 PRO 230 VAL 231 ILE 232 PRO 233 ILE 234 THR 235 ILE 236 THR 237 LEU 238 ALA 239 PRO 240 MET 241 CYS 242 SER 243 GLU 244 PHE 245 ALA 246 GLY 247 LEU 248 ARG 249 GLN 250 ALA 251 VAL 252 THR 253 GLN 254
Unit 3	GLY 1 PHE 2 PRO 3 THR 4 GLU 5 LEU 6 LYS 7 PRO 8 GLY 9 THR 10 ASN 11 GLN 12 PHE 13 LEU 14 THR 15 THR 16 ASP 17 ASP 18 GLY 19 VAL 20 SER 21 ALA 22 PRO 23 ILE 24 LEU 25 PRO 26 ASN 27 PHE 28 HIS 29 PRO 30 THR 31 PRO 32 CYS 33 ILE 34 HIS 35 ILE 36 PRO 37 GLY 38 GLU 39 VAL 40 ARG 41 ASN 42 LEU 43 LEU 44 GLU 45 LEU 46 CYS 47 GLN 48 VAL 49 GLU 50 THR 51 ILE 52 LEU 53 GLU 54 VAL 55 ASN 56 ASN 57 VAL 58 PRO 59 THR 60 ASN 61 ALA 62 THR 63 SER 64 LEU 65 MET 66 GLU 67 ARG 68 LEU 69 ARG 70 PHE 71 PRO 72 VAL 73 SER 74 ALA 75 GLN 76 ALA 77 GLY 78 LYS 79 GLY 80 GLU 81 LEU 82 CYS 83 ALA 84 VAL 85 PHE 86 ARG 87 ALA 88 ASP 89 PRO 90 GLY 91 ARG 92 ASN 93 GLY 94 PRO 95 TRP 96 GLN 97 SER 98 THR 99 LEU 100 LEU 101 GLY 102 GLN 103 LEU 104 CYS 105 GLY 106 TYR 107 TYR 108 THR 109 GLN 110 TRP 111 SER 112 GLY 113 SER 114 LEU 115 GLU 116 VAL 117 THR 118 PHE 119 MET 120 PHE 121 THR 122 GLY 123 SER 124 PHE 125 MET 126 ALA 127 THR 128 GLY 129 LYS 130 MET 131 LEU 132 ILE 133 ALA 134 TYR 135 THR 136 PRO 137 PRO 138 GLY 139 GLY 140 PRO 141 LEU 142 PRO 143 LYS 144 ASP 145 ARG 146 ALA 147 THR 148 ALA 149 MET 150 LEU 151 GLY 152 THR 153 HIS 154 VAL 155 ILE 156 TRP 157 ASP 158 PHE 159 GLY 160 LEU 161 GLN 162 SER 163 SER 164 VAL 165 THR 166 LEU 167 VAL 168 ILE 169 PRO 170 TRP 171 ILE 172 SER 173 ASN 174 THR 175 HIS 176 TYR 177 ARG 178 ALA 179 HIS 180 ALA 181 ARG 182 ASP 183 GLY 184 VAL 185 PHE 186 ASP 187 TYR 188 TYR 189 THR 190 THR 191 GLY 192 LEU 193 VAL 194 SER 195 ILE 196 TRP 197 TYR 198 GLN 199 THR 200 ASN 201 TYR 202 VAL 203 VAL 204 PRO 205 ILE 206 GLY 207 ALA 208 PRO 209 ASN 210 THR 211 ALA 212 TYR 213 ILE 214 ILE 215 ALA 216 LEU 217 ALA 218 ALA 219 ALA 220 GLN 221 LYS 222 ASN 223 PHE 224 THR 225 MET 226 LYS 227 LEU 228 CYS 229 LYS 230 ASP 231 ALA 232 SER 233 ASP 234 ILE 235 LEU 236 GLN 237 THR 238 GLY 239 THR 240 ILE 241 GLN 242
Unit 4	SER 12 HIS 13 GLU 14 ASN 15 SER 16 ASN 17 SER 18 ALA 19 THR 20 GLU 21 GLY 22 SER 23 THR 24 ILE 25 ASN 26 TYR 27 THR 28 THR 29 ILE 30 ASN 31 TYR 32 TYR 33 LYS 34 ASP 35 SER 36 TYR 37 ALA 38 ALA 39 THR 40 ALA 41 GLY 42 LYS 43 GLN 44 SER 45 LEU 46 LYS 47 GLN 48 ASP 49 PRO 50 ASP 51 LYS 52 PHE 53 ALA 54 ASN 55 PRO 56 VAL 57 LYS 58 ASP 59 ILE 60 PHE 61 THR 62 GLU 63 MET 64 ALA 65 ALA 66 PRO 67 LEU 68 LYS 69

Ligands

Unit 5	SPH 301 AMP 302 K 303 NA 304
Unit 6	K 301 CL 302