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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF TRANSFERRIN BINDING PROTEIN A (TBPA NEISSERIAL MENINGITIDIS SEROGROUP B IN COMPLEX WITH FULL LE TRANSFERRIN
Keywords IRON BINDING PROTEIN, TRANSFERRIN BINDING PROTEIN A, IRON BINDING/SCAVENGING, MEMBRANE PROTEIN-METAL TRANSPORT COMPLE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3V8X     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSFERRIN-BINDING PROTEIN 1  A 853 6664 0
2  Protein   SEROTRANSFERRIN  B 676 5050 0
3  Ligand    C 10 0 131
4  Ligand    D 9 0 120
5  Ligand   TRANSFERRIN-BINDING PROTEIN 1  A 2 0 42
6 Water     204 0 204
total       1754 11714 497
Proteins
Unit 1 GLU54 VAL55 THR56 GLY57 LEU58 GLY59 LYS60 LEU61 VAL62 LYS63 SER64 SER65 ASP66 THR67 LEU68 SER69 LYS70 GLU71 GLN72 VAL73 LEU74 ASN75 ILE76 ARG77 ASP78 LEU79 THR80 ARG81 TYR82 ASP83 PRO84 GLY85 ILE86 ALA87 VAL88 VAL89 GLU90 GLN91 GLY92 ARG93 GLY94 ALA95 SER96 SER97 GLY98 TYR99 SER100 ILE101 ARG102 GLY103 MET104 ASP105 LYS106 ASN107 ARG108 VAL109 SER110 LEU111 THR112 VAL113 ASP114 GLY115 VAL116 SER117 GLN118 ILE119 GLN120 SER121 TYR122 THR123 ALA124 GLN125 ALA126 ALA127 LEU128 GLY129 GLY130 THR131 ARG132 THR133 ALA134 GLY135 SER136 SER137 GLY138 ALA139 ILE140 ASN141 GLU142 ILE143 GLU144 TYR145 GLU146 ASN147 VAL148 LYS149 ALA150 VAL151 GLU152 ILE153 SER154 LYS155 GLY156 SER157 ASN158 SER159 VAL160 GLU161 GLN162 GLY163 SER164 GLY165 ALA166 LEU167 ALA168 GLY169 SER170 VAL171 ALA172 PHE173 GLN174 THR175 LYS176 THR177 ALA178 ASP179 ASP180 VAL181 ILE182 GLY183 GLU184 GLY185 ARG186 GLN187 TRP188 GLY189 ILE190 GLN191 SER192 LYS193 THR194 ALA195 TYR196 SER197 GLY198 LYS199 ASN200 ARG201 GLY202 LEU203 THR204 GLN205 SER206 ILE207 ALA208 LEU209 ALA210 GLY211 ARG212 ILE213 GLY214 GLY215 ALA216 GLU217 ALA218 LEU219 LEU220 ILE221 HIS222 THR223 GLY224 ARG225 ARG226 ALA227 GLY228 GLU229 ILE230 ARG231 ALA232 HIS233 GLU234 ASP235 ALA236 GLY237 ARG238 GLY239 VAL240 GLN241 SER242 PHE243 ASN244 ARG245 LEU246 VAL247 PRO248 VAL249 GLU250 ASP251 SER252 SER253 ASN254 TYR255 ALA256 TYR257 PHE258 ILE259 VAL260 LYS261 GLU262 GLU263 CYS264 LYS265 ASN266 GLY267 SER268 TYR269 GLU270 THR271 CYS272 LYS273 ALA274 ASN275 PRO276 LYS277 LYS278 ASP279 VAL280 VAL281 GLY282 LYS283 ASP284 GLU285 ARG286 GLN287 THR288 VAL289 SER290 THR291 ARG292 ASP293 TYR294 THR295 GLY296 PRO297 ASN298 ARG299 PHE300 LEU301 ALA302 ASP303 PRO304 LEU305 SER306 TYR307 GLU308 SER309 ARG310 SER311 TRP312 LEU313 PHE314 ARG315 PRO316 GLY317 PHE318 ARG319 PHE320 GLU321 ASN322 LYS323 ARG324 HIS325 TYR326 ILE327 GLY328 GLY329 ILE330 LEU331 GLU332 HIS333 THR334 GLN335 GLN336 THR337 PHE338 ASP339 THR340 ARG341 ASP342 MET343 THR344 VAL345 PRO346 ALA347 PHE348 LEU349 THR350 LYS351 ALA352 VAL353 PHE354 ASP355 ALA356 ASN357 LYS358 LYS359 GLN360 ALA361 GLY362 SER363 LEU364 PRO365 GLY366 ASN367 GLY368 LYS369 TYR370 ALA371 GLY372 ASN373 HIS374 LYS375 TYR376 GLY377 GLY378 LEU379 PHE380 THR381 ASN382 GLY383 GLU384 ASN385 GLY386 ALA387 LEU388 VAL389 GLY390 ALA391 GLU392 TYR393 GLY394 THR395 GLY396 VAL397 PHE398 TYR399 ASP400 GLU401 THR402 HIS403 THR404 LYS405 SER406 ARG407 TYR408 GLY409 LEU410 GLU411 TYR412 VAL413 TYR414 THR415 ASN416 ALA417 ASP418 LYS419 ASP420 THR421 TRP422 ALA423 ASP424 TYR425 ALA426 ARG427 LEU428 SER429 TYR430 ASP431 ARG432 GLN433 GLY434 VAL435 GLY436 LEU437 ASP438 ASN439 HIS440 PHE441 GLN442 GLN443 THR444 HIS445 CYS446 SER447 ALA448 ASP449 GLY450 SER451 ASP452 LYS453 TYR454 CYS455 ARG456 PRO457 SER458 ALA459 ASP460 LYS461 PRO462 PHE463 SER464 TYR465 TYR466 LYS467 SER468 ASP469 ARG470 VAL471 ILE472 TYR473 GLY474 GLU475 SER476 HIS477 ARG478 LEU479 LEU480 GLN481 ALA482 ALA483 PHE484 LYS485 LYS486 SER487 PHE488 ASP489 LYS492 ILE493 ARG494 HIS495 ASN496 LEU497 SER498 VAL499 ASN500 LEU501 GLY502 PHE503 ASP504 ARG505 PHE506 GLY507 SER508 ASN509 LEU510 ARG511 HIS512 GLN513 ASP514 TYR515 TYR516 TYR517 GLN518 HIS519 ALA520 ASN521 ARG522 ALA523 TYR524 SER525 SER526 ASN527 THR528 PRO529 PRO530 GLN531 ASN532 ASN533 GLY534 LYS535 LYS536 ILE537 SER538 PRO539 ASN540 GLY541 SER542 GLU543 THR544 SER545 PRO546 TYR547 TRP548 VAL549 THR550 ILE551 GLY552 ARG553 GLY554 ASN555 VAL556 VAL557 THR558 GLY559 GLN560 ILE561 CYS562 ARG563 LEU564 GLY565 ASN566 ASN567 THR568 TYR569 THR570 ASP571 CYS572 THR573 PRO574 ARG575 SER576 ILE577 ASN578 GLY579 LYS580 SER581 TYR582 TYR583 ALA584 ALA585 VAL586 ARG587 ASP588 ASN589 VAL590 ARG591 LEU592 GLY593 ARG594 TRP595 ALA596 ASP597 VAL598 GLY599 ALA600 GLY601 LEU602 ARG603 TYR604 ASP605 TYR606 ARG607 SER608 THR609 HIS610 SER611 ASP612 ASP613 GLY614 SER615 VAL616 SER617 THR618 GLY619 THR620 HIS621 ARG622 THR623 LEU624 SER625 TRP626 ASN627 ALA628 GLY629 ILE630 VAL631 LEU632 LYS633 PRO634 THR635 ASP636 TRP637 LEU638 ASP639 LEU640 THR641 TYR642 ARG643 THR644 SER645 THR646 GLY647 PHE648 ARG649 LEU650 PRO651 SER652 PHE653 ALA654 GLU655 MET656 TYR657 GLY658 TRP659 ARG660 ALA661 GLY662 VAL663 GLN664 SER665 LYS666 ALA667 VAL668 LYS669 ILE670 ASP671 PRO672 GLU673 LYS674 SER675 PHE676 ASN677 LYS678 GLU679 ALA680 GLY681 ILE682 VAL683 PHE684 LYS685 GLY686 ASP687 PHE688 GLY689 ASN690 LEU691 GLU692 ALA693 SER694 TRP695 PHE696 ASN697 ASN698 ALA699 TYR700 ARG701 ASP702 LEU703 ILE704 VAL705 ARG706 GLY707 TYR708 GLU709 ALA710 GLN711 ILE712 LYS713 ASP714 GLY715 LYS716 GLU717 GLU718 ALA719 LYS720 GLY721 ASP722 PRO723 ALA724 TYR725 LEU726 ASN727 ALA728 GLN729 SER730 ALA731 ARG732 ILE733 THR734 GLY735 ILE736 ASN737 ILE738 LEU739 GLY740 LYS741 ILE742 ASP743 TRP744 ASN745 GLY746 VAL747 TRP755 TYR756 SER757 THR758 PHE759 ALA760 TYR761 ASN762 ARG763 VAL764 ARG765 VAL766 ARG767 ASP768 ILE769 LYS770 LYS771 ARG772 ALA773 ASP774 ARG775 THR776 ASP777 ILE778 GLN779 SER780 HIS781 LEU782 PHE783 ASP784 ALA785 ILE786 GLN787 PRO788 SER789 ARG790 TYR791 VAL792 VAL793 GLY794 LEU795 GLY796 TYR797 ASP798 GLN799 PRO800 GLU801 GLY802 LYS803 TRP804 GLY805 VAL806 ASN807 GLY808 MET809 LEU810 THR811 TYR812 SER813 LYS814 ALA815 LYS816 GLU817 ILE818 THR819 GLU820 LEU821 LEU822 GLY823 SER824 ARG825 ALA826 LEU827 LEU828 ASN829 GLY830 ASN831 SER832 ARG833 ASN834 THR835 LYS836 ALA837 THR838 ALA839 ARG840 ARG841 THR842 ARG843 PRO844 TRP845 TYR846 ILE847 VAL848 ASP849 VAL850 SER851 GLY852 TYR853 TYR854 THR855 VAL856 LYS857 LYS858 HIS859 PHE860 THR861 LEU862 ARG863 ALA864 GLY865 VAL866 TYR867 ASN868 LEU869 LEU870 ASN871 TYR872 ARG873 TYR874 VAL875 THR876 TRP877 GLU878 ASN879 VAL880 ARG881 GLN882 THR883 ALA884 GLY885 GLY886 ALA887 VAL888 ASN889 GLN890 HIS891 LYS892 ASN893 VAL894 GLY895 VAL896 TYR897 ASN898 ARG899 TYR900 ALA901 ALA902 PRO903 GLY904 ARG905 ASN906 TYR907 THR908 PHE909 SER910 LEU911 GLU912 TYR913 LYS914 PHE915
Unit 2 LYS4 THR5 VAL6 ARG7 TRP8 CYS9 ALA10 VAL11 SER12 GLU13 HIS14 GLU15 ALA16 THR17 LYS18 CYS19 GLN20 SER21 PHE22 ARG23 ASP24 HIS25 MET26 LYS27 SER28 VAL29 ILE30 PRO31 SER32 ASP33 GLY34 PRO35 SER36 VAL37 ALA38 CYS39 VAL40 LYS41 LYS42 ALA43 SER44 TYR45 LEU46 ASP47 CYS48 ILE49 ARG50 ALA51 ILE52 ALA53 ALA54 ASN55 GLU56 ALA57 ASP58 ALA59 VAL60 THR61 LEU62 ASP63 ALA64 GLY65 LEU66 VAL67 TYR68 ASP69 ALA70 TYR71 LEU72 ALA73 PRO74 ASN75 ASN76 LEU77 LYS78 PRO79 VAL80 VAL81 ALA82 GLU83 PHE84 TYR85 GLY86 SER87 LYS88 GLU89 ASP90 PRO91 GLN92 THR93 PHE94 TYR95 TYR96 ALA97 VAL98 ALA99 VAL100 VAL101 LYS102 LYS103 ASP104 SER105 GLY106 PHE107 GLN108 MET109 ASN110 GLN111 LEU112 ARG113 GLY114 LYS115 LYS116 SER117 CYS118 HIS119 THR120 GLY121 LEU122 GLY123 ARG124 SER125 ALA126 GLY127 TRP128 ASN129 ILE130 PRO131 ILE132 GLY133 LEU134 LEU135 TYR136 CYS137 ASP138 LEU139 PRO140 GLU141 PRO142 ARG143 LYS144 PRO145 LEU146 GLU147 LYS148 ALA149 VAL150 ALA151 ASN152 PHE153 PHE154 SER155 GLY156 SER157 CYS158 ALA159 PRO160 CYS161 ALA162 ASP163 GLY164 THR165 ASP166 PHE167 PRO168 GLN169 LEU170 CYS171 GLN172 LEU173 CYS174 PRO175 GLY176 CYS177 GLY178 CYS179 SER180 THR181 LEU182 ASN183 GLN184 TYR185 PHE186 GLY187 TYR188 SER189 GLY190 ALA191 PHE192 LYS193 CYS194 LEU195 LYS196 ASP197 GLY198 ALA199 GLY200 ASP201 VAL202 ALA203 PHE204 VAL205 LYS206 HIS207 SER208 THR209 ILE210 PHE211 GLU212 ASN213 LEU214 ALA215 ASN216 LYS217 ALA218 ASP219 ARG220 ASP221 GLN222 TYR223 GLU224 LEU225 LEU226 CYS227 LEU228 ASP229 ASN230 THR231 ARG232 LYS233 PRO234 VAL235 ASP236 GLU237 TYR238 LYS239 ASP240 CYS241 HIS242 LEU243 ALA244 GLN245 VAL246 PRO247 SER248 HIS249 THR250 VAL251 VAL252 ALA253 ARG254 SER255 MET256 GLY257 GLY258 LYS259 GLU260 ASP261 LEU262 ILE263 TRP264 GLU265 LEU266 LEU267 ASN268 GLN269 ALA270 GLN271 GLU272 HIS273 PHE274 GLY275 LYS276 ASP277 LYS278 SER279 LYS280 GLU281 PHE282 GLN283 LEU284 PHE285 SER286 SER287 PRO288 HIS289 GLY290 LYS291 ASP292 LEU293 LEU294 PHE295 LYS296 ASP297 SER298 ALA299 HIS300 GLY301 PHE302 LEU303 LYS304 VAL305 PRO306 PRO307 ARG308 MET309 ASP310 ALA311 LYS312 MET313 TYR314 LEU315 GLY316 TYR317 GLU318 TYR319 VAL320 THR321 ALA322 ILE323 ARG324 ASN325 LEU326 ARG327 GLU328 GLY329 THR330 CYS331 PRO332 GLU333 ALA334 PRO335 THR336 ASP337 GLU338 CYS339 LYS340 PRO341 VAL342 LYS343 TRP344 CYS345 ALA346 LEU347 SER348 HIS349 HIS350 GLU351 ARG352 LEU353 LYS354 CYS355 ASP356 GLU357 TRP358 SER359 VAL360 ASN361 SER362 VAL363 GLY364 LYS365 ILE366 GLU367 CYS368 VAL369 SER370 ALA371 GLU372 THR373 THR374 GLU375 ASP376 CYS377 ILE378 ALA379 LYS380 ILE381 MET382 ASN383 GLY384 GLU385 ALA386 ASP387 ALA388 MET389 SER390 LEU391 ASP392 GLY393 GLY394 PHE395 VAL396 TYR397 ILE398 ALA399 GLY400 LYS401 CYS402 GLY403 LEU404 VAL405 PRO406 VAL407 LEU408 ALA409 GLU410 ASN411 TYR412 ASN413 LYS414 SER415 ASP416 ASN417 CYS418 GLU419 ASP420 THR421 PRO422 GLU423 ALA424 GLY425 TYR426 PHE427 ALA428 VAL429 ALA430 VAL431 VAL432 LYS433 LYS434 SER435 ALA436 SER437 ASP438 LEU439 THR440 TRP441 ASP442 ASN443 LEU444 LYS445 GLY446 LYS447 LYS448 SER449 CYS450 HIS451 THR452 ALA453 VAL454 GLY455 ARG456 THR457 ALA458 GLY459 TRP460 ASN461 ILE462 PRO463 MET464 GLY465 LEU466 LEU467 TYR468 ASN469 LYS470 ILE471 ASN472 HIS473 CYS474 ARG475 PHE476 ASP477 GLU478 PHE479 PHE480 SER481 GLU482 GLY483 CYS484 ALA485 PRO486 GLY487 SER488 LYS489 LYS490 ASP491 SER492 SER493 LEU494 CYS495 LYS496 LEU497 CYS498 MET499 GLY500 SER501 GLY502 LEU503 ASN504 LEU505 CYS506 GLU507 PRO508 ASN509 ASN510 LYS511 GLU512 GLY513 TYR514 TYR515 GLY516 TYR517 THR518 GLY519 ALA520 PHE521 ARG522 CYS523 LEU524 VAL525 GLU526 LYS527 GLY528 ASP529 VAL530 ALA531 PHE532 VAL533 LYS534 HIS535 GLN536 THR537 VAL538 PRO539 GLN540 ASN541 THR542 GLY543 GLY544 LYS545 ASN546 PRO547 ASP548 PRO549 TRP550 ALA551 LYS552 ASN553 LEU554 ASN555 GLU556 LYS557 ASP558 TYR559 GLU560 LEU561 LEU562 CYS563 LEU564 ASP565 GLY566 THR567 ARG568 LYS569 PRO570 VAL571 GLU572 GLU573 TYR574 ALA575 ASN576 CYS577 HIS578 LEU579 ALA580 ARG581 ALA582 PRO583 ASN584 HIS585 ALA586 VAL587 VAL588 THR589 ARG590 LYS591 ASP592 LYS593 GLU594 ALA595 CYS596 VAL597 HIS598 LYS599 ILE600 LEU601 ARG602 GLN603 GLN604 GLN605 HIS606 LEU607 PHE608 GLY609 SER610 ASN611 VAL612 THR613 ASP614 CYS615 SER616 GLY617 ASN618 PHE619 CYS620 LEU621 PHE622 ARG623 SER624 GLU625 THR626 LYS627 ASP628 LEU629 LEU630 PHE631 ARG632 ASP633 ASP634 THR635 VAL636 CYS637 LEU638 ALA639 LYS640 LEU641 HIS642 ASP643 ARG644 ASN645 THR646 TYR647 GLU648 LYS649 TYR650 LEU651 GLY652 GLU653 GLU654 TYR655 VAL656 LYS657 ALA658 VAL659 GLY660 ASN661 LEU662 ARG663 LYS664 CYS665 SER666 THR667 SER668 SER669 LEU670 LEU671 GLU672 ALA673 CYS674 THR675 PHE676 ARG677 ARG678 PRO679
Ligands
Unit 3 NAG1 NAG2 BMA3 MAN4 NAG5 GAL6 SIA7 MAN8 NAG9 GAL10
Unit 4 NAG1 NAG2 BMA3 MAN4 NAG5 GAL6 SIA7 MAN8 NAG9
Unit 5 C8E1001 C8E1002
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany