3V8H - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE FROM BURKHOLDERIA THAILANDENSIS
• Keywords: SSGCID, THYMIDYLATE SYNTHASE, STRUCTURAL GENOMICS, SEATTLE S GENOMICS CENTER FOR INFECTIOUS DISEASE, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3V8H	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	THYMIDYLATE SYNTHASE	A	312	2474	0
2	Protein	THYMIDYLATE SYNTHASE	B	311	2439	0
3	Protein	THYMIDYLATE SYNTHASE	C	288	2273	0
4	Protein	THYMIDYLATE SYNTHASE	D	290	2284	0
5	Ligand	THYMIDYLATE SYNTHASE	A	4	0	25
6	Ligand	THYMIDYLATE SYNTHASE	B	2	0	17
7	Ligand	THYMIDYLATE SYNTHASE	C	2	0	17
8	Ligand	THYMIDYLATE SYNTHASE	D	1	0	4
9	Water			1162	0	1162
total				2372	9470	1225

Proteins

Unit 1	MET 1 LYS 2 GLN 3 TYR 4 LEU 5 ASP 6 LEU 7 VAL 8 ARG 9 THR 10 ILE 11 LEU 12 ASP 13 THR 14 GLY 15 THR 16 TRP 17 GLN 18 SER 19 ASN 20 GLY 23 ILE 24 ARG 25 THR 26 ILE 27 GLY 28 ILE 29 PRO 30 GLY 31 ALA 32 MET 33 LEU 34 ARG 35 PHE 36 ASP 37 LEU 38 GLN 39 GLN 40 GLY 41 PHE 42 PRO 43 ALA 44 VAL 45 THR 46 THR 47 LYS 48 LYS 49 LEU 50 ALA 51 PHE 52 LYS 53 SER 54 ALA 55 ILE 56 GLY 57 GLU 58 LEU 59 VAL 60 GLY 61 PHE 62 LEU 63 ARG 64 ALA 65 THR 66 ARG 67 SER 68 ALA 69 ALA 70 GLU 71 PHE 72 ARG 73 ALA 74 LEU 75 GLY 76 CYS 77 LYS 78 VAL 79 TRP 80 ASP 81 ALA 82 ASN 83 ALA 84 ASN 85 GLU 86 ASN 87 ALA 88 GLN 89 TRP 90 LEU 91 ALA 92 ASN 93 PRO 94 TYR 95 ARG 96 ARG 97 GLY 98 ALA 99 ASP 100 ASP 101 LEU 102 GLY 103 ASP 104 VAL 105 TYR 106 GLY 107 VAL 108 GLN 109 TRP 110 ARG 111 ARG 112 TRP 113 PRO 114 GLY 115 TYR 116 LYS 117 VAL 118 LEU 119 ASP 120 ALA 121 HIS 122 ALA 123 ASP 124 ALA 125 GLN 126 ILE 127 ALA 128 ASP 129 ALA 130 THR 131 SER 132 ARG 133 GLY 134 PHE 135 ARG 136 ILE 137 VAL 138 ALA 139 ARG 140 PHE 141 GLU 142 GLU 143 GLY 144 GLY 145 ALA 146 ASP 147 LYS 148 VAL 149 LEU 150 LEU 151 HIS 152 LYS 153 ALA 154 ILE 155 ASP 156 GLN 157 LEU 158 ARG 159 ASP 160 CYS 161 LEU 162 ASP 163 THR 164 ILE 165 VAL 166 ARG 167 ASP 168 PRO 169 SER 170 SER 171 ARG 172 ARG 173 ILE 174 LEU 175 PHE 176 HIS 177 GLY 178 TRP 179 ASN 180 PRO 181 ALA 182 VAL 183 LEU 184 ASP 185 GLU 186 ILE 187 ALA 188 LEU 189 PRO 190 ALA 191 CYS 192 HIS 193 LEU 194 LEU 195 TYR 196 GLN 197 PHE 198 LEU 199 PRO 200 ASN 201 VAL 202 GLU 203 ARG 204 ARG 205 GLU 206 ILE 207 SER 208 LEU 209 CYS 210 LEU 211 TYR 212 ILE 213 ARG 214 SER 215 ASN 216 ASP 217 VAL 218 GLY 219 LEU 220 GLY 221 THR 222 PRO 223 PHE 224 ASN 225 LEU 226 ALA 227 GLU 228 GLY 229 ALA 230 ALA 231 LEU 232 LEU 233 THR 234 LEU 235 VAL 236 GLY 237 ARG 238 LEU 239 THR 240 GLY 241 TYR 242 SER 243 PRO 244 ARG 245 TRP 246 PHE 247 THR 248 TYR 249 PHE 250 ILE 251 GLY 252 ASP 253 ALA 254 HIS 255 ILE 256 TYR 257 GLU 258 ASN 259 GLN 260 LEU 261 ASP 262 MET 263 LEU 264 LYS 265 GLN 266 GLN 267 LEU 268 GLU 269 ARG 270 GLU 271 PRO 272 PHE 273 GLU 274 SER 275 PRO 276 ARG 277 LEU 278 GLU 279 LEU 280 ALA 281 GLU 282 ARG 283 VAL 284 PRO 285 ASP 286 TYR 287 ALA 288 LYS 289 THR 290 GLY 291 LYS 292 TYR 293 GLU 294 PRO 295 GLN 296 TRP 297 LEU 298 GLU 299 ARG 300 VAL 301 GLU 302 PRO 303 SER 304 ASP 305 PHE 306 THR 307 LEU 308 VAL 309 GLY 310 TYR 311 ARG 312 HIS 313 HIS 314
Unit 2	MET 1 LYS 2 GLN 3 TYR 4 LEU 5 ASP 6 LEU 7 VAL 8 ARG 9 THR 10 ILE 11 LEU 12 ASP 13 THR 14 GLY 15 THR 16 TRP 17 GLN 18 SER 19 ASN 20 ILE 24 ARG 25 THR 26 ILE 27 GLY 28 ILE 29 PRO 30 GLY 31 ALA 32 MET 33 LEU 34 ARG 35 PHE 36 ASP 37 LEU 38 GLN 39 GLN 40 GLY 41 PHE 42 PRO 43 ALA 44 VAL 45 THR 46 THR 47 LYS 48 LYS 49 LEU 50 ALA 51 PHE 52 LYS 53 SER 54 ALA 55 ILE 56 GLY 57 GLU 58 LEU 59 VAL 60 GLY 61 PHE 62 LEU 63 ARG 64 ALA 65 THR 66 ARG 67 SER 68 ALA 69 ALA 70 GLU 71 PHE 72 ARG 73 ALA 74 LEU 75 GLY 76 CYS 77 LYS 78 VAL 79 TRP 80 ASP 81 ALA 82 ASN 83 ALA 84 ASN 85 GLU 86 ASN 87 ALA 88 GLN 89 TRP 90 LEU 91 ALA 92 ASN 93 PRO 94 TYR 95 ARG 96 ARG 97 GLY 98 ALA 99 ASP 100 ASP 101 LEU 102 GLY 103 ASP 104 VAL 105 TYR 106 GLY 107 VAL 108 GLN 109 TRP 110 ARG 111 ARG 112 TRP 113 PRO 114 GLY 115 TYR 116 LYS 117 VAL 118 LEU 119 ASP 120 ALA 121 HIS 122 ALA 123 ASP 124 ALA 125 GLN 126 ILE 127 ALA 128 ASP 129 ALA 130 THR 131 SER 132 ARG 133 GLY 134 PHE 135 ARG 136 ILE 137 VAL 138 ALA 139 ARG 140 PHE 141 GLU 142 GLU 143 GLY 144 GLY 145 ALA 146 ASP 147 LYS 148 VAL 149 LEU 150 LEU 151 HIS 152 LYS 153 ALA 154 ILE 155 ASP 156 GLN 157 LEU 158 ARG 159 ASP 160 CYS 161 LEU 162 ASP 163 THR 164 ILE 165 VAL 166 ARG 167 ASP 168 PRO 169 SER 170 SER 171 ARG 172 ARG 173 ILE 174 LEU 175 PHE 176 HIS 177 GLY 178 TRP 179 ASN 180 PRO 181 ALA 182 VAL 183 LEU 184 ASP 185 GLU 186 ILE 187 ALA 188 LEU 189 PRO 190 ALA 191 CYS 192 HIS 193 LEU 194 LEU 195 TYR 196 GLN 197 PHE 198 LEU 199 PRO 200 ASN 201 VAL 202 GLU 203 ARG 204 ARG 205 GLU 206 ILE 207 SER 208 LEU 209 CYS 210 LEU 211 TYR 212 ILE 213 ARG 214 SER 215 ASN 216 ASP 217 VAL 218 GLY 219 LEU 220 GLY 221 THR 222 PRO 223 PHE 224 ASN 225 LEU 226 ALA 227 GLU 228 GLY 229 ALA 230 ALA 231 LEU 232 LEU 233 THR 234 LEU 235 VAL 236 GLY 237 ARG 238 LEU 239 THR 240 GLY 241 TYR 242 SER 243 PRO 244 ARG 245 TRP 246 PHE 247 THR 248 TYR 249 PHE 250 ILE 251 GLY 252 ASP 253 ALA 254 HIS 255 ILE 256 TYR 257 GLU 258 ASN 259 GLN 260 LEU 261 ASP 262 MET 263 LEU 264 LYS 265 GLN 266 GLN 267 LEU 268 GLU 269 ARG 270 GLU 271 PRO 272 PHE 273 GLU 274 SER 275 PRO 276 ARG 277 LEU 278 GLU 279 LEU 280 ALA 281 GLU 282 ARG 283 VAL 284 PRO 285 ASP 286 TYR 287 ALA 288 LYS 289 THR 290 GLY 291 LYS 292 TYR 293 GLU 294 PRO 295 GLN 296 TRP 297 LEU 298 GLU 299 ARG 300 VAL 301 GLU 302 PRO 303 SER 304 ASP 305 PHE 306 THR 307 LEU 308 VAL 309 GLY 310 TYR 311 ARG 312 HIS 313 HIS 314
Unit 3	LYS 2 GLN 3 TYR 4 LEU 5 ASP 6 LEU 7 VAL 8 ARG 9 THR 10 ILE 11 LEU 12 ASP 13 THR 14 GLY 15 THR 16 TRP 17 GLN 18 SER 19 ASN 20 ARG 21 THR 22 GLY 23 ILE 24 ARG 25 THR 26 ILE 27 GLY 28 ILE 29 PRO 30 GLY 31 ALA 32 MET 33 LEU 34 ARG 35 PHE 36 ASP 37 LEU 38 GLN 39 GLN 40 GLY 41 PHE 42 PRO 43 LEU 50 ALA 51 PHE 52 LYS 53 SER 54 ALA 55 ILE 56 GLY 57 GLU 58 LEU 59 VAL 60 GLY 61 PHE 62 LEU 63 ARG 64 ALA 65 THR 66 ARG 67 SER 68 ALA 69 ALA 70 GLU 71 PHE 72 ARG 73 ALA 74 LEU 75 GLY 76 CYS 77 LYS 78 VAL 79 TRP 80 ASP 81 ALA 82 ASN 83 ALA 84 ASN 85 GLU 86 ASN 87 ALA 88 GLN 89 TRP 90 LEU 91 ALA 92 ASN 93 PRO 94 TYR 95 ARG 96 ARG 97 GLY 98 ALA 99 ASP 100 ASP 101 LEU 102 GLY 103 ASP 104 VAL 105 TYR 106 GLY 107 VAL 108 GLN 109 TRP 110 ARG 111 ARG 112 TRP 113 PRO 114 GLY 115 TYR 116 LYS 117 VAL 118 LEU 119 ASP 120 ALA 121 HIS 122 ALA 123 ASP 124 ALA 125 GLN 126 ILE 127 ALA 128 ASP 129 ALA 130 THR 131 SER 132 ARG 133 GLY 134 PHE 135 ARG 136 ILE 137 VAL 138 ALA 139 ARG 140 PHE 141 GLU 142 GLU 143 GLY 144 GLY 145 ALA 146 ASP 147 LYS 148 VAL 149 LEU 150 LEU 151 HIS 152 LYS 153 ALA 154 ILE 155 ASP 156 GLN 157 LEU 158 ARG 159 ASP 160 CYS 161 LEU 162 ASP 163 THR 164 ILE 165 VAL 166 ARG 167 ASP 168 PRO 169 SER 170 SER 171 ARG 172 ARG 173 ILE 174 LEU 175 PHE 176 HIS 177 GLY 178 TRP 179 ASN 180 PRO 181 ALA 182 VAL 183 LEU 184 ASP 185 GLU 186 ILE 187 ALA 188 LEU 189 PRO 190 ALA 191 CYS 192 HIS 193 LEU 194 LEU 195 TYR 196 GLN 197 PHE 198 LEU 199 PRO 200 ASN 201 VAL 202 GLU 203 ARG 204 ARG 205 GLU 206 ILE 207 SER 208 LEU 209 CYS 210 LEU 211 TYR 212 ILE 213 ARG 214 SER 215 ASN 216 ASP 217 VAL 218 GLY 219 LEU 220 GLY 221 THR 222 PRO 223 PHE 224 ASN 225 LEU 226 ALA 227 GLU 228 GLY 229 ALA 230 ALA 231 LEU 232 LEU 233 THR 234 LEU 235 VAL 236 GLY 237 ARG 238 LEU 239 THR 240 GLY 241 TYR 242 SER 243 PRO 244 ARG 245 TRP 246 PHE 247 THR 248 TYR 249 PHE 250 ILE 251 GLY 252 ASP 253 ALA 254 HIS 255 ILE 256 TYR 257 GLU 258 ASN 259 GLN 260 PRO 276 ARG 277 LEU 278 GLU 279 LEU 280 ALA 281 GLU 282 ARG 283 VAL 284 PRO 285 ASP 286 TYR 287 ALA 288 LYS 289 THR 290 GLY 291 LYS 292 TYR 293 GLU 294 PRO 295 GLN 296 TRP 297 LEU 298 GLU 299 ARG 300 VAL 301 GLU 302 PRO 303 SER 304 ASP 305 PHE 306 THR 307 LEU 308 VAL 309 GLY 310
Unit 4	LYS 2 GLN 3 TYR 4 LEU 5 ASP 6 LEU 7 VAL 8 ARG 9 THR 10 ILE 11 LEU 12 ASP 13 THR 14 GLY 15 THR 16 TRP 17 GLN 18 ARG 25 THR 26 ILE 27 GLY 28 ILE 29 PRO 30 GLY 31 ALA 32 MET 33 LEU 34 ARG 35 PHE 36 ASP 37 LEU 38 GLN 39 GLN 40 GLY 41 PHE 42 PRO 43 LEU 50 ALA 51 PHE 52 LYS 53 SER 54 ALA 55 ILE 56 GLY 57 GLU 58 LEU 59 VAL 60 GLY 61 PHE 62 LEU 63 ARG 64 ALA 65 THR 66 ARG 67 SER 68 ALA 69 ALA 70 GLU 71 PHE 72 ARG 73 ALA 74 LEU 75 GLY 76 CYS 77 LYS 78 VAL 79 TRP 80 ASP 81 ALA 82 ASN 83 ALA 84 ASN 85 GLU 86 ASN 87 ALA 88 GLN 89 TRP 90 LEU 91 ALA 92 ASN 93 PRO 94 TYR 95 ARG 96 ARG 97 GLY 98 ALA 99 ASP 100 ASP 101 LEU 102 GLY 103 ASP 104 VAL 105 TYR 106 GLY 107 VAL 108 GLN 109 TRP 110 ARG 111 ARG 112 TRP 113 PRO 114 GLY 115 TYR 116 LYS 117 VAL 118 LEU 119 ASP 120 ALA 121 HIS 122 ALA 123 ASP 124 ALA 125 GLN 126 ILE 127 ALA 128 ASP 129 ALA 130 THR 131 SER 132 ARG 133 GLY 134 PHE 135 ARG 136 ILE 137 VAL 138 ALA 139 ARG 140 PHE 141 GLU 142 GLU 143 GLY 144 GLY 145 ALA 146 ASP 147 LYS 148 VAL 149 LEU 150 LEU 151 HIS 152 LYS 153 ALA 154 ILE 155 ASP 156 GLN 157 LEU 158 ARG 159 ASP 160 CYS 161 LEU 162 ASP 163 THR 164 ILE 165 VAL 166 ARG 167 ASP 168 PRO 169 SER 170 SER 171 ARG 172 ARG 173 ILE 174 LEU 175 PHE 176 HIS 177 GLY 178 TRP 179 ASN 180 PRO 181 ALA 182 VAL 183 LEU 184 ASP 185 GLU 186 ILE 187 ALA 188 LEU 189 PRO 190 ALA 191 CYS 192 HIS 193 LEU 194 LEU 195 TYR 196 GLN 197 PHE 198 LEU 199 PRO 200 ASN 201 VAL 202 GLU 203 ARG 204 ARG 205 GLU 206 ILE 207 SER 208 LEU 209 CYS 210 LEU 211 TYR 212 ILE 213 ARG 214 SER 215 ASN 216 ASP 217 VAL 218 GLY 219 LEU 220 GLY 221 THR 222 PRO 223 PHE 224 ASN 225 LEU 226 ALA 227 GLU 228 GLY 229 ALA 230 ALA 231 LEU 232 LEU 233 THR 234 LEU 235 VAL 236 GLY 237 ARG 238 LEU 239 THR 240 GLY 241 TYR 242 SER 243 PRO 244 ARG 245 TRP 246 PHE 247 THR 248 TYR 249 PHE 250 ILE 251 GLY 252 ASP 253 ALA 254 HIS 255 ILE 256 TYR 257 GLU 258 ASN 259 GLN 260 LEU 261 ASP 262 MET 263 LEU 264 LYS 265 GLN 266 GLN 267 SER 275 PRO 276 ARG 277 LEU 278 GLU 279 LEU 280 ALA 281 GLU 282 ARG 283 VAL 284 PRO 285 ASP 286 TYR 287 ALA 288 LYS 289 THR 290 GLY 291 LYS 292 TYR 293 GLU 294 PRO 295 GLN 296 TRP 297 LEU 298 GLU 299 ARG 300 VAL 301 GLU 302 PRO 303 SER 304 ASP 305 PHE 306 THR 307 LEU 308 VAL 309 GLY 310

Ligands

Unit 5	EDO 324 EDO 325 EDO 326 CIT 400
Unit 6	EDO 324 CIT 400
Unit 7	EDO 324 CIT 400
Unit 8	EDO 324