3V7E - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF YBXF BOUND TO THE SAM-I RIBOSWITCH APTA
• Keywords: RNA-PROTEIN COMPLEX, RIBOSWITCH, K-TURN, L7AE-LIKE, A MEMBER L7AE/L30E SUPERFAMILY, UNKNOWN FUNCTION, K-TURN MOTIF, RIBO PROTEIN-RNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3V7E	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE	A	81	524	0
2	Protein	RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE	B	77	438	0
3	RNA		C	126	2691	0
4	RNA		D	126	2681	0
5	Ligand		C	26	0	124
6	Ligand		D	16	0	78
7	Water			15	0	15
total				467	6334	217

Proteins

Unit 1

SER 502 TYR 503 ASP 504 LYS 505 VAL 506 SER 507 GLN 508 ALA 509 LYS 510 SER 511 ILE 512 ILE 513 ILE 514 GLY 515 THR 516 LYS 517 GLN 518 THR 519 VAL 520 LYS 521 ALA 522 LEU 523 LYS 524 ARG 525 GLY 526 SER 527 VAL 528 LYS 529 GLU 530 VAL 531 VAL 532 VAL 533 ALA 534 LYS 535 ASP 536 ALA 537 ASP 538 PRO 539 ILE 540 LEU 541 THR 542 SER 543 SER 544 VAL 545 VAL 546 SER 547 LEU 548 ALA 549 GLU 550 ASP 551 GLN 552 GLY 553 ILE 554 SER 555 VAL 556 SER 557 MET 558 VAL 559 GLU 560 SER 561 MET 562 LYS 563 LYS 564 LEU 565 GLY 566 LYS 567 ALA 568 CYS 569 GLY 570 ILE 571 GLU 572 VAL 573 GLY 574 ALA 575 ALA 576 ALA 577 VAL 578 ALA 579 ILE 580 ILE 581 LEU 582

Unit 2

SER 602 TYR 603 ASP 604 LYS 605 VAL 606 SER 607 GLN 608 ALA 609 LYS 610 SER 611 ILE 612 ILE 613 ILE 614 GLY 615 THR 616 LYS 617 GLN 618 THR 619 VAL 620 LYS 621 ALA 622 LEU 623 LYS 624 ARG 625 GLY 626 SER 627 VAL 628 LYS 629 GLU 630 VAL 631 VAL 632 VAL 633 ALA 634 LYS 635 ASP 636 ALA 637 ASP 638 PRO 639 ILE 640 LEU 641 THR 642 SER 643 SER 644 VAL 645 VAL 646 SER 647 LEU 648 ALA 649 GLU 650 ASP 651 GLN 652 GLY 653 ILE 654 SER 655 VAL 656 SER 657 MET 658 VAL 659 GLU 660 SER 661 MET 662 LYS 663 LYS 664 LEU 665 GLY 666 LYS 667 ALA 668 CYS 669 GLY 670 ILE 671 GLU 672 VAL 673 GLY 674 ALA 675 ALA 676 ALA 677 VAL 678

Nucleic acids

Unit 3

G 1 G 2 C 3 U 4 U 5 A 6 U 7 C 8 A 9 A 10 G 11 A 12 G 13 A 14 G 15 G 16 U 17 G 18 G 19 A 20 G 21 G 22 G 23 A 24 C 25 U 26 G 27 G 28 C 29 C 30 C 31 G 32 A 33 U 34 G 35 A 36 A 37 A 38 C 39 C 40 C 41 G 42 G 43 C 44 A 45 A 46 C 47 C 48 A 49 C 50 U 51 A 52 G 53 U 54 C 55 U 56 A 57 G 58 C 59 G 60 U 61 C 62 A 63 G 64 C 65 U 66 U 67 C 68 G 69 G 70 C 71 U 72 G 73 A 74 C 75 G 76 C 77 U 78 A 79 G 80 G 81 C 82 U 83 A 84 G 85 U 86 G 87 G 88 U 89 G 90 C 91 C 92 A 93 A 94 U 95 U 96 C 97 C 98 U 99 G 100 C 101 A 102 G 103 C 104 G 105 G 106 A 107 A 108 A 109 C 110 G 111 U 112 U 113 G 114 A 115 A 116 A 117 G 118 A 119 U 120 G 121 A 122 G 123 C 124 C 125 A 126

Unit 4

G 201 G 202 C 203 U 204 U 205 A 206 U 207 C 208 A 209 A 210 G 211 A 212 G 213 A 214 G 215 G 216 U 217 G 218 G 219 A 220 G 221 G 222 G 223 A 224 C 225 U 226 G 227 G 228 C 229 C 230 C 231 G 232 A 233 U 234 G 235 A 236 A 237 A 238 C 239 C 240 C 241 G 242 G 243 C 244 A 245 A 246 C 247 C 248 A 249 C 250 U 251 A 252 G 253 U 254 C 255 U 256 A 257 G 258 C 259 G 260 U 261 C 262 A 263 G 264 C 265 U 266 U 267 C 268 G 269 G 270 C 271 U 272 G 273 A 274 C 275 G 276 C 277 U 278 A 279 G 280 G 281 C 282 U 283 A 284 G 285 U 286 G 287 G 288 U 289 G 290 C 291 C 292 A 293 A 294 U 295 U 296 C 297 C 298 U 299 G 300 C 301 A 302 G 303 C 304 G 305 G 306 A 307 A 308 A 309 C 310 G 311 U 312 U 313 G 314 A 315 A 316 A 317 G 318 A 319 U 320 G 321 A 322 G 323 C 324 C 325 A 326

Ligands

Unit 5	NCO 901 NCO 902 NCO 903 NCO 904 NCO 905 NCO 906 NCO 907 NCO 908 NCO 909 NCO 910 NCO 911 NCO 912 SAM 913 MG 914 MG 915 MG 916 MG 917 MG 918 MG 919 MG 920 MG 921 MG 922 MG 923 MG 924 MG 925 MG 926
Unit 6	NCO 401 NCO 402 NCO 403 NCO 404 NCO 405 NCO 406 SAM 407 MG 408 MG 409 MG 410 MG 411 MG 412 MG 413 MG 414 MG 415 MG 416