3V7A - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURAL BASIS FOR BROAD DETECTION OF GENOGROUP II NOROVIR MONOCLONAL ANTIBODY THAT BINDS TO A SITE OCCLUDED IN THE VI PARTICLE
• Keywords: VIRUS, PROTEIN-FAB COMPLEX, BROADLY-REACTIVE ANTIBODY, IMMUN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3V7A	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	5B18 HEAVY CHAIN	F	220	1643	0
2	Protein	5B18 KAPPA CHAIN	G	215	1671	0
3	Protein	5B18 HEAVY CHAIN	E	220	1643	0
4	Protein	5B18 KAPPA CHAIN	H	215	1671	0
5	Protein	CAPSID	A	315	2434	0
6	Protein	CAPSID	B	309	2397	0
total				1494	11459	0

Proteins

Unit 1	GLN 1 VAL 2 GLN 3 LEU 4 GLN 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 LEU 11 VAL 12 ARG 13 PRO 14 GLY 15 THR 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 ALA 28 PHE 29 THR 30 ASN 31 TYR 32 LEU 33 ILE 34 GLU 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 VAL 50 ILE 51 ASN 52 PRO 53 ARG 54 SER 55 GLY 56 ASP 57 THR 58 ASN 59 SER 60 ASN 61 GLU 62 LYS 63 PHE 64 LYS 65 GLY 66 LYS 67 ALA 68 ILE 69 LEU 70 THR 71 ALA 72 ASP 73 LYS 74 SER 75 SER 76 SER 77 THR 78 ALA 79 TYR 80 MET 81 GLN 82 LEU 83 SER 84 SER 85 LEU 86 THR 87 SER 88 ASP 89 ASP 90 SER 91 ALA 92 VAL 93 TYR 94 PHE 95 CYS 96 ALA 97 ARG 98 SER 99 GLY 100 THR 101 THR 102 ALA 103 TYR 104 PHE 105 ALA 106 MET 107 ASP 108 TYR 109 TRP 110 GLY 111 GLN 112 GLY 113 THR 114 SER 115 VAL 116 THR 117 VAL 118 SER 119 SER 120 ALA 121 LYS 122 THR 123 THR 124 PRO 125 PRO 126 SER 127 VAL 128 TYR 129 PRO 130 LEU 131 ALA 132 PRO 133 GLY 134 SER 135 ALA 136 ALA 137 GLN 138 THR 139 ASN 140 SER 141 MET 142 VAL 143 THR 144 LEU 145 GLY 146 CYS 147 LEU 148 VAL 149 LYS 150 GLY 151 TYR 152 PHE 153 PRO 154 GLU 155 PRO 156 VAL 157 THR 158 VAL 159 THR 160 TRP 161 ASN 162 SER 163 GLY 164 SER 165 LEU 166 SER 167 SER 168 GLY 169 VAL 170 HIS 171 THR 172 PHE 173 PRO 174 ALA 175 VAL 176 LEU 177 GLN 178 SER 179 ASP 180 LEU 181 TYR 182 THR 183 LEU 184 SER 185 SER 186 SER 187 VAL 188 THR 189 VAL 190 PRO 191 SER 192 SER 193 THR 194 TRP 195 PRO 196 SER 197 GLU 198 THR 199 VAL 200 THR 201 CYS 202 ASN 203 VAL 204 ALA 205 HIS 206 PRO 207 ALA 208 SER 209 SER 210 THR 211 LYS 212 VAL 213 ASP 214 LYS 215 LYS 216 ILE 217 VAL 218 PRO 219 ARG 220
Unit 2	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 GLU 17 THR 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLU 27 ASN 28 ILE 29 TYR 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 GLN 40 GLY 41 LYS 42 SER 43 PRO 44 GLN 45 LEU 46 LEU 47 VAL 48 TYR 49 ASN 50 VAL 51 LYS 52 THR 53 LEU 54 ALA 55 GLU 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLN 70 PHE 71 SER 72 LEU 73 LYS 74 ILE 75 ASN 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 GLY 84 SER 85 TYR 86 TYR 87 CYS 88 GLN 89 HIS 90 HIS 91 TYR 92 GLY 93 SER 94 PRO 95 PRO 96 TRP 97 THR 98 PHE 99 GLY 100 GLY 101 GLY 102 THR 103 LYS 104 LEU 105 GLU 106 ILE 107 LYS 108 ARG 109 ALA 110 ASP 111 ALA 112 ALA 113 PRO 114 THR 115 VAL 116 SER 117 ILE 118 PHE 119 PRO 120 PRO 121 SER 122 SER 123 GLU 124 GLN 125 LEU 126 THR 127 SER 128 GLY 129 GLY 130 ALA 131 SER 132 VAL 133 VAL 134 CYS 135 PHE 136 LEU 137 ASN 138 ASN 139 PHE 140 TYR 141 PRO 142 LYS 143 ASP 144 ILE 145 ASN 146 VAL 147 LYS 148 TRP 149 LYS 150 ILE 151 ASP 152 GLY 153 SER 154 GLU 155 ARG 156 GLN 157 ASN 158 GLY 159 VAL 160 LEU 161 ASN 162 SER 163 TRP 164 THR 165 ASP 166 GLN 167 ASP 168 SER 169 LYS 170 ASP 171 SER 172 THR 173 TYR 174 SER 175 MET 176 SER 177 SER 178 THR 179 LEU 180 THR 181 LEU 182 THR 183 LYS 184 ASP 185 GLU 186 TYR 187 GLU 188 ARG 189 HIS 190 ASN 191 SER 192 TYR 193 THR 194 CYS 195 GLU 196 ALA 197 THR 198 HIS 199 LYS 200 THR 201 SER 202 THR 203 SER 204 PRO 205 ILE 206 VAL 207 LYS 208 SER 209 PHE 210 ASN 211 ARG 212 ASN 213 GLU 214 CYS 215
Unit 3	GLN 1 VAL 2 GLN 3 LEU 4 GLN 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 LEU 11 VAL 12 ARG 13 PRO 14 GLY 15 THR 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 ALA 28 PHE 29 THR 30 ASN 31 TYR 32 LEU 33 ILE 34 GLU 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 VAL 50 ILE 51 ASN 52 PRO 53 ARG 54 SER 55 GLY 56 ASP 57 THR 58 ASN 59 SER 60 ASN 61 GLU 62 LYS 63 PHE 64 LYS 65 GLY 66 LYS 67 ALA 68 ILE 69 LEU 70 THR 71 ALA 72 ASP 73 LYS 74 SER 75 SER 76 SER 77 THR 78 ALA 79 TYR 80 MET 81 GLN 82 LEU 83 SER 84 SER 85 LEU 86 THR 87 SER 88 ASP 89 ASP 90 SER 91 ALA 92 VAL 93 TYR 94 PHE 95 CYS 96 ALA 97 ARG 98 SER 99 GLY 100 THR 101 THR 102 ALA 103 TYR 104 PHE 105 ALA 106 MET 107 ASP 108 TYR 109 TRP 110 GLY 111 GLN 112 GLY 113 THR 114 SER 115 VAL 116 THR 117 VAL 118 SER 119 SER 120 ALA 121 LYS 122 THR 123 THR 124 PRO 125 PRO 126 SER 127 VAL 128 TYR 129 PRO 130 LEU 131 ALA 132 PRO 133 GLY 134 SER 135 ALA 136 ALA 137 GLN 138 THR 139 ASN 140 SER 141 MET 142 VAL 143 THR 144 LEU 145 GLY 146 CYS 147 LEU 148 VAL 149 LYS 150 GLY 151 TYR 152 PHE 153 PRO 154 GLU 155 PRO 156 VAL 157 THR 158 VAL 159 THR 160 TRP 161 ASN 162 SER 163 GLY 164 SER 165 LEU 166 SER 167 SER 168 GLY 169 VAL 170 HIS 171 THR 172 PHE 173 PRO 174 ALA 175 VAL 176 LEU 177 GLN 178 SER 179 ASP 180 LEU 181 TYR 182 THR 183 LEU 184 SER 185 SER 186 SER 187 VAL 188 THR 189 VAL 190 PRO 191 SER 192 SER 193 THR 194 TRP 195 PRO 196 SER 197 GLU 198 THR 199 VAL 200 THR 201 CYS 202 ASN 203 VAL 204 ALA 205 HIS 206 PRO 207 ALA 208 SER 209 SER 210 THR 211 LYS 212 VAL 213 ASP 214 LYS 215 LYS 216 ILE 217 VAL 218 PRO 219 ARG 220
Unit 4	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 GLU 17 THR 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLU 27 ASN 28 ILE 29 TYR 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 GLN 40 GLY 41 LYS 42 SER 43 PRO 44 GLN 45 LEU 46 LEU 47 VAL 48 TYR 49 ASN 50 VAL 51 LYS 52 THR 53 LEU 54 ALA 55 GLU 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLN 70 PHE 71 SER 72 LEU 73 LYS 74 ILE 75 ASN 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 GLY 84 SER 85 TYR 86 TYR 87 CYS 88 GLN 89 HIS 90 HIS 91 TYR 92 GLY 93 SER 94 PRO 95 PRO 96 TRP 97 THR 98 PHE 99 GLY 100 GLY 101 GLY 102 THR 103 LYS 104 LEU 105 GLU 106 ILE 107 LYS 108 ARG 109 ALA 110 ASP 111 ALA 112 ALA 113 PRO 114 THR 115 VAL 116 SER 117 ILE 118 PHE 119 PRO 120 PRO 121 SER 122 SER 123 GLU 124 GLN 125 LEU 126 THR 127 SER 128 GLY 129 GLY 130 ALA 131 SER 132 VAL 133 VAL 134 CYS 135 PHE 136 LEU 137 ASN 138 ASN 139 PHE 140 TYR 141 PRO 142 LYS 143 ASP 144 ILE 145 ASN 146 VAL 147 LYS 148 TRP 149 LYS 150 ILE 151 ASP 152 GLY 153 SER 154 GLU 155 ARG 156 GLN 157 ASN 158 GLY 159 VAL 160 LEU 161 ASN 162 SER 163 TRP 164 THR 165 ASP 166 GLN 167 ASP 168 SER 169 LYS 170 ASP 171 SER 172 THR 173 TYR 174 SER 175 MET 176 SER 177 SER 178 THR 179 LEU 180 THR 181 LEU 182 THR 183 LYS 184 ASP 185 GLU 186 TYR 187 GLU 188 ARG 189 HIS 190 ASN 191 SER 192 TYR 193 THR 194 CYS 195 GLU 196 ALA 197 THR 198 HIS 199 LYS 200 THR 201 SER 202 THR 203 SER 204 PRO 205 ILE 206 VAL 207 LYS 208 SER 209 PHE 210 ASN 211 ARG 212 ASN 213 GLU 214 CYS 215
Unit 5	SER 224 LYS 225 PRO 226 PHE 227 THR 228 LEU 229 PRO 230 ILE 231 LEU 232 THR 233 LEU 234 GLY 235 GLU 236 LEU 237 THR 238 ASN 239 SER 240 ARG 241 PHE 242 PRO 243 LEU 244 PRO 245 ILE 246 ASP 247 VAL 248 LEU 249 TYR 250 THR 251 ASN 252 PRO 253 ASN 254 GLU 255 SER 256 ALA 257 ILE 258 VAL 259 GLN 260 CYS 261 GLN 262 ASN 263 GLY 264 ARG 265 CYS 266 THR 267 LEU 268 ASP 269 GLY 270 GLU 271 LEU 272 GLN 273 GLY 274 THR 275 THR 276 GLN 277 LEU 278 LEU 279 PRO 280 THR 281 GLY 282 ILE 283 CYS 284 ALA 285 PHE 286 ARG 287 GLY 288 LYS 289 VAL 290 THR 291 GLN 292 GLN 293 VAL 294 GLN 295 ASP 296 GLU 297 HIS 298 ARG 299 GLY 300 THR 301 HIS 302 TRP 303 ASN 304 MET 305 THR 306 VAL 307 THR 308 ASN 309 LEU 310 ASN 311 GLY 312 THR 313 PRO 314 PHE 315 ASP 316 PRO 317 THR 318 GLU 319 ASP 320 VAL 321 PRO 322 ALA 323 PRO 324 LEU 325 GLY 326 THR 327 PRO 328 ASP 329 PHE 330 SER 331 GLY 332 GLN 333 ILE 334 TYR 335 GLY 336 VAL 337 ILE 338 SER 339 GLN 340 ARG 341 ASN 342 THR 343 ASN 344 THR 345 VAL 346 PRO 347 GLY 348 GLU 349 GLY 350 ASN 351 LEU 352 PRO 353 ALA 354 ASN 355 ARG 356 ALA 357 HIS 358 GLU 359 ALA 360 VAL 361 ILE 362 ALA 363 THR 364 TYR 365 SER 366 PRO 367 LYS 368 PHE 369 THR 370 PRO 371 LYS 372 LEU 373 GLY 374 ASN 375 ILE 376 GLN 377 PHE 378 SER 379 THR 380 TRP 381 GLU 382 THR 383 GLN 384 ASP 385 VAL 386 SER 387 SER 388 GLY 389 GLN 390 PRO 391 THR 392 LYS 393 PHE 394 THR 395 PRO 396 VAL 397 GLY 398 LEU 399 ALA 400 SER 401 VAL 402 ASP 403 ALA 404 ASN 405 SER 406 HIS 407 PHE 408 ASP 409 GLN 410 TRP 411 THR 412 LEU 413 PRO 414 SER 415 TYR 416 SER 417 GLY 418 ALA 419 LEU 420 THR 421 LEU 422 ASN 423 MET 424 ASN 425 LEU 426 ALA 427 PRO 428 SER 429 VAL 430 ALA 431 PRO 432 VAL 433 PHE 434 PRO 435 GLY 436 GLU 437 CYS 438 LEU 439 LEU 440 PHE 441 PHE 442 ARG 443 SER 444 PHE 445 ILE 446 PRO 447 LEU 448 LYS 449 GLY 450 GLY 451 TYR 452 GLY 453 ASN 454 PRO 455 ALA 456 ILE 457 ASP 458 CYS 459 LEU 460 MET 461 PRO 462 GLN 463 GLU 464 TRP 465 VAL 466 GLN 467 HIS 468 LEU 469 TYR 470 GLN 471 GLU 472 SER 473 ALA 474 PRO 475 SER 476 LEU 477 SER 478 ASP 479 VAL 480 ALA 481 LEU 482 VAL 483 ARG 484 TYR 485 VAL 486 ASN 487 PRO 488 GLU 489 THR 490 GLY 491 ARG 492 THR 493 LEU 494 PHE 495 GLU 496 ALA 497 LYS 498 LEU 499 HIS 500 ARG 501 ASN 502 GLY 503 PHE 504 LEU 505 THR 506 VAL 507 ALA 508 ARG 509 ASN 510 SER 511 ALA 512 GLY 513 PRO 514 VAL 515 VAL 516 ALA 517 PRO 518 THR 519 ASN 520 GLY 521 TYR 522 PHE 523 ARG 524 PHE 525 ASP 526 SER 527 TRP 528 VAL 529 ASN 530 GLN 531 PHE 532 TYR 533 THR 534 LEU 535 ALA 536 PRO 537 MET 538
Unit 6	LYS 225 PRO 226 PHE 227 THR 228 LEU 229 PRO 230 ILE 231 LEU 232 THR 233 LEU 234 GLY 235 GLU 236 LEU 237 THR 238 ASN 239 SER 240 ARG 241 PHE 242 PRO 243 LEU 244 PRO 245 ILE 246 ASP 247 VAL 248 LEU 249 TYR 250 THR 251 ASN 252 PRO 253 ASN 254 GLU 255 SER 256 ALA 257 ILE 258 VAL 259 GLN 260 CYS 261 GLN 262 ASN 263 GLY 264 ARG 265 CYS 266 THR 267 LEU 268 ASP 269 GLY 270 GLU 271 LEU 272 GLN 273 GLY 274 THR 275 THR 276 GLN 277 LEU 278 LEU 279 PRO 280 THR 281 GLY 282 ILE 283 CYS 284 ALA 285 PHE 286 ARG 287 GLY 288 LYS 289 VAL 290 THR 291 GLN 292 GLN 293 VAL 294 GLN 295 ASP 296 GLU 297 HIS 298 ARG 299 GLY 300 THR 301 HIS 302 TRP 303 ASN 304 MET 305 THR 306 VAL 307 THR 308 ASN 309 LEU 310 ASN 311 GLY 312 THR 313 PRO 314 PHE 315 ASP 316 PRO 317 THR 318 GLU 319 ASP 320 VAL 321 PRO 322 ALA 323 PRO 324 LEU 325 GLY 326 THR 327 PRO 328 ASP 329 PHE 330 SER 331 GLY 332 GLN 333 ILE 334 TYR 335 GLY 336 VAL 337 ILE 338 SER 339 GLN 340 ARG 341 ASN 342 THR 343 ASN 344 THR 345 ASN 351 LEU 352 PRO 353 ALA 354 ASN 355 ARG 356 ALA 357 HIS 358 GLU 359 ALA 360 VAL 361 ILE 362 ALA 363 THR 364 TYR 365 SER 366 PRO 367 LYS 368 PHE 369 THR 370 PRO 371 LYS 372 LEU 373 GLY 374 ASN 375 ILE 376 GLN 377 PHE 378 SER 379 THR 380 TRP 381 GLU 382 THR 383 GLN 384 ASP 385 VAL 386 SER 387 SER 388 GLY 389 GLN 390 PRO 391 THR 392 LYS 393 PHE 394 THR 395 PRO 396 VAL 397 GLY 398 LEU 399 ALA 400 SER 401 VAL 402 ASP 403 ALA 404 ASN 405 SER 406 HIS 407 PHE 408 ASP 409 GLN 410 TRP 411 THR 412 LEU 413 PRO 414 SER 415 TYR 416 SER 417 GLY 418 ALA 419 LEU 420 THR 421 LEU 422 ASN 423 MET 424 ASN 425 LEU 426 ALA 427 PRO 428 SER 429 VAL 430 ALA 431 PRO 432 VAL 433 PHE 434 PRO 435 GLY 436 GLU 437 CYS 438 LEU 439 LEU 440 PHE 441 PHE 442 ARG 443 SER 444 PHE 445 ILE 446 PRO 447 LEU 448 LYS 449 GLY 450 GLY 451 TYR 452 GLY 453 ASN 454 PRO 455 ALA 456 ILE 457 ASP 458 CYS 459 LEU 460 MET 461 PRO 462 GLN 463 GLU 464 TRP 465 VAL 466 GLN 467 HIS 468 LEU 469 TYR 470 GLN 471 GLU 472 SER 473 ALA 474 PRO 475 SER 476 LEU 477 SER 478 ASP 479 VAL 480 ALA 481 LEU 482 VAL 483 ARG 484 TYR 485 VAL 486 ASN 487 PRO 488 GLU 489 THR 490 GLY 491 ARG 492 THR 493 LEU 494 PHE 495 GLU 496 ALA 497 LYS 498 LEU 499 HIS 500 ARG 501 ASN 502 GLY 503 PHE 504 LEU 505 THR 506 VAL 507 ALA 508 ARG 509 ASN 510 SER 511 ALA 512 GLY 513 PRO 514 VAL 515 VAL 516 ALA 517 PRO 518 THR 519 ASN 520 GLY 521 TYR 522 PHE 523 ARG 524 PHE 525 ASP 526 SER 527 TRP 528 VAL 529 ASN 530 GLN 531 PHE 532 TYR 533 THR 534 LEU 535 ALA 536 PRO 537 MET 538