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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN ANTI-HBV E-ANTIGEN MONOCLONAL FAB FR (E6), UNBOUND
Keywords IMMUNOGLOBULIN DOMAIN, ANTIBODY FAB FRAGMENT, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3V6F     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FAB E6 HEAVY CHAIN  A 218 1630 0
2  Protein   FAB E6 LIGHT CHAIN  B 219 1707 0
3  Protein   FAB E6 HEAVY CHAIN  C 212 1596 0
4  Protein   FAB E6 LIGHT CHAIN  D 219 1707 0
5  Protein   FAB E6 HEAVY CHAIN  E 212 1596 0
6  Protein   FAB E6 LIGHT CHAIN  F 219 1707 0
7  Protein   FAB E6 HEAVY CHAIN  H 215 1612 0
8  Protein   FAB E6 LIGHT CHAIN  L 219 1707 0
9 Water     469 0 469
total       2202 13262 469

Proteins
Unit 1 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 GLY16 SER17 LEU18 LYS19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 GLY33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 THR40 PRO41 ASP42 LYS43 ARG44 LEU45 GLU46 TRP47 VAL48 ALA49 THR50 ILE51 SER52 SER52A GLY53 GLY54 ASN55 TYR56 ILE57 TYR58 TYR59 PRO60 ASP61 THR62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 ARG71 ASP72 ASN73 ALA74 LYS75 ASN76 THR77 LEU78 TYR79 LEU80 GLN81 MET82 SER82A SER82B LEU82C LYS83 SER84 GLU85 ASP86 THR87 ALA88 MET89 TYR90 TYR91 CYS92 THR93 ARG94 GLU95 GLY96 ALA97 TYR98 SER99 GLY100 SER101 SER102 SER103 TYR104 PRO105G MET105H ASP106 TYR107 TRP108 GLY109 GLN110 GLY111 THR112 SER113 VAL114 THR115 VAL116 SER117 SER118 ALA119 LYS120 THR121 THR122 PRO123 PRO124 SER125 VAL126 TYR127 PRO128 LEU129 ALA130 PRO131 GLY132 SER139 SER140 VAL141 THR142 LEU143 GLY144 CYS145 LEU146 VAL147 LYS148 GLY149 TYR150 PHE151 PRO152 GLU153 SER154 VAL155 THR156 VAL157 THR158 TRP159 ASN160 SER161 GLY162 SER163 LEU164 SER165 SER166 SER167 VAL168 HIS169 THR170 PHE171 PRO172 ALA173 LEU174 LEU175 GLN176 SER177 GLY178 LEU179 TYR180 THR181 MET182 SER183 SER184 SER185 VAL186 THR187 VAL188 PRO189 SER190 SER191 THR192 TRP193 PRO194 SER195 GLN196 THR197 VAL198 THR199 CYS200 SER201 VAL202 ALA203 HIS204 PRO205 ALA206 SER207 SER208 THR209 THR210 VAL211 ASP212 LYS213 LYS214 LEU215 GLU216 PRO217 SER218 GLY219
Unit 2 ASN1 ILE2 MET3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 ALA12 VAL13 SER14 ALA15 GLY16 GLU17 LYS18 VAL19 THR20 MET21 ASN22 CYS23 LYS24 SER25 SER26 GLN27 SER28 VAL29 LEU30 TYR31 SER32 SER33 ASN34 GLN35 LYS36 ASN37 TYR38 LEU39 ALA40 TRP41 TYR42 GLN43 GLN44 LYS45 PRO46 GLY47 GLN48 SER49 PRO50 LYS51 LEU52 LEU53 ILE54 TYR55 TRP56 ALA57 SER58 THR59 ARG60 GLU61 SER62 GLY63 VAL64 PRO65 ASP66 ARG67 PHE68 THR69 GLY70 SER71 GLY72 SER73 GLY74 THR75 ASP76 PHE77 THR78 LEU79 THR80 ILE81 SER82 SER83 VAL84 GLN85 THR86 GLU87 ASP88 LEU89 ALA90 VAL91 TYR92 TYR93 CYS94 HIS95 GLN96 TYR97 LEU98 SER99 SER100 TYR101 MET102 TYR103 THR104 PHE105 GLY106 GLY107 GLY108 THR109 LYS110 LEU111 GLU112 ILE113 LYS114 ARG115 ALA116 ASP117 ALA118 ALA119 PRO120 THR121 VAL122 SER123 ILE124 PHE125 PRO126 PRO127 SER128 SER129 GLU130 GLN131 LEU132 THR133 SER134 GLY135 GLY136 ALA137 SER138 VAL139 VAL140 CYS141 PHE142 LEU143 ASN144 ASN145 PHE146 TYR147 PRO148 LYS149 ASP150 ILE151 ASN152 VAL153 LYS154 TRP155 LYS156 ILE157 ASP158 GLY159 SER160 GLU161 ARG162 GLN163 ASN164 GLY165 VAL166 LEU167 ASN168 SER169 TRP170 THR171 ASP172 GLN173 ASP174 SER175 LYS176 ASP177 SER178 THR179 TYR180 SER181 MET182 SER183 SER184 THR185 LEU186 THR187 LEU188 THR189 LYS190 ASP191 GLU192 TYR193 GLU194 ARG195 HIS196 ASN197 SER198 TYR199 THR200 CYS201 GLU202 ALA203 THR204 HIS205 LYS206 THR207 SER208 THR209 SER210 PRO211 ILE212 VAL213 LYS214 SER215 PHE216 ASN217 ARG218 ASN219
Unit 3 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 GLY16 SER17 LEU18 LYS19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 GLY33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 THR40 PRO41 ASP42 LYS43 ARG44 LEU45 GLU46 TRP47 VAL48 ALA49 THR50 ILE51 SER52 SER52A GLY53 GLY54 ASN55 TYR56 ILE57 TYR58 TYR59 PRO60 ASP61 THR62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 ARG71 ASP72 ASN73 ALA74 LYS75 ASN76 THR77 LEU78 TYR79 LEU80 GLN81 MET82 SER82A SER82B LEU82C LYS83 SER84 GLU85 ASP86 THR87 ALA88 MET89 TYR90 TYR91 CYS92 THR93 ARG94 GLU95 GLY96 ALA97 TYR98 SER99 GLY100 SER101 SER102 SER103 TYR104 PRO105G MET105H ASP106 TYR107 TRP108 GLY109 GLN110 GLY111 THR112 SER113 VAL114 THR115 VAL116 SER117 SER118 ALA119 LYS120 THR121 THR122 PRO123 PRO124 SER125 VAL126 TYR127 PRO128 LEU129 ALA130 PRO131 SER139 SER140 VAL141 THR142 LEU143 GLY144 CYS145 LEU146 VAL147 LYS148 GLY149 TYR150 PHE151 PRO152 GLU153 SER154 VAL155 THR156 VAL157 THR158 TRP159 ASN160 SER161 SER167 VAL168 HIS169 THR170 PHE171 PRO172 ALA173 LEU174 LEU175 GLN176 SER177 GLY178 LEU179 TYR180 THR181 MET182 SER183 SER184 SER185 VAL186 THR187 VAL188 PRO189 SER190 SER191 THR192 TRP193 PRO194 SER195 GLN196 THR197 VAL198 THR199 CYS200 SER201 VAL202 ALA203 HIS204 PRO205 ALA206 SER207 SER208 THR209 THR210 VAL211 ASP212 LYS213 LYS214 LEU215 GLU216 PRO217 SER218 GLY219
Unit 4 ASN1 ILE2 MET3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 ALA12 VAL13 SER14 ALA15 GLY16 GLU17 LYS18 VAL19 THR20 MET21 ASN22 CYS23 LYS24 SER25 SER26 GLN27 SER28 VAL29 LEU30 TYR31 SER32 SER33 ASN34 GLN35 LYS36 ASN37 TYR38 LEU39 ALA40 TRP41 TYR42 GLN43 GLN44 LYS45 PRO46 GLY47 GLN48 SER49 PRO50 LYS51 LEU52 LEU53 ILE54 TYR55 TRP56 ALA57 SER58 THR59 ARG60 GLU61 SER62 GLY63 VAL64 PRO65 ASP66 ARG67 PHE68 THR69 GLY70 SER71 GLY72 SER73 GLY74 THR75 ASP76 PHE77 THR78 LEU79 THR80 ILE81 SER82 SER83 VAL84 GLN85 THR86 GLU87 ASP88 LEU89 ALA90 VAL91 TYR92 TYR93 CYS94 HIS95 GLN96 TYR97 LEU98 SER99 SER100 TYR101 MET102 TYR103 THR104 PHE105 GLY106 GLY107 GLY108 THR109 LYS110 LEU111 GLU112 ILE113 LYS114 ARG115 ALA116 ASP117 ALA118 ALA119 PRO120 THR121 VAL122 SER123 ILE124 PHE125 PRO126 PRO127 SER128 SER129 GLU130 GLN131 LEU132 THR133 SER134 GLY135 GLY136 ALA137 SER138 VAL139 VAL140 CYS141 PHE142 LEU143 ASN144 ASN145 PHE146 TYR147 PRO148 LYS149 ASP150 ILE151 ASN152 VAL153 LYS154 TRP155 LYS156 ILE157 ASP158 GLY159 SER160 GLU161 ARG162 GLN163 ASN164 GLY165 VAL166 LEU167 ASN168 SER169 TRP170 THR171 ASP172 GLN173 ASP174 SER175 LYS176 ASP177 SER178 THR179 TYR180 SER181 MET182 SER183 SER184 THR185 LEU186 THR187 LEU188 THR189 LYS190 ASP191 GLU192 TYR193 GLU194 ARG195 HIS196 ASN197 SER198 TYR199 THR200 CYS201 GLU202 ALA203 THR204 HIS205 LYS206 THR207 SER208 THR209 SER210 PRO211 ILE212 VAL213 LYS214 SER215 PHE216 ASN217 ARG218 ASN219
Unit 5 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 GLY16 SER17 LEU18 LYS19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 GLY33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 THR40 PRO41 ASP42 LYS43 ARG44 LEU45 GLU46 TRP47 VAL48 ALA49 THR50 ILE51 SER52 SER52A GLY53 GLY54 ASN55 TYR56 ILE57 TYR58 TYR59 PRO60 ASP61 THR62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 ARG71 ASP72 ASN73 ALA74 LYS75 ASN76 THR77 LEU78 TYR79 LEU80 GLN81 MET82 SER82A SER82B LEU82C LYS83 SER84 GLU85 ASP86 THR87 ALA88 MET89 TYR90 TYR91 CYS92 THR93 ARG94 GLU95 GLY96 ALA97 TYR98 SER99 GLY100 SER101 SER102 SER103 TYR104 PRO105G MET105H ASP106 TYR107 TRP108 GLY109 GLN110 GLY111 THR112 SER113 VAL114 THR115 VAL116 SER117 SER118 ALA119 LYS120 THR121 THR122 PRO123 PRO124 SER125 VAL126 TYR127 PRO128 LEU129 ALA130 PRO131 SER139 SER140 VAL141 THR142 LEU143 GLY144 CYS145 LEU146 VAL147 LYS148 GLY149 TYR150 PHE151 PRO152 GLU153 SER154 VAL155 THR156 VAL157 THR158 TRP159 ASN160 SER166 SER167 VAL168 HIS169 THR170 PHE171 PRO172 ALA173 LEU174 LEU175 GLN176 SER177 GLY178 LEU179 TYR180 THR181 MET182 SER183 SER184 SER185 VAL186 THR187 VAL188 PRO189 SER190 SER191 THR192 TRP193 PRO194 SER195 GLN196 THR197 VAL198 THR199 CYS200 SER201 VAL202 ALA203 HIS204 PRO205 ALA206 SER207 SER208 THR209 THR210 VAL211 ASP212 LYS213 LYS214 LEU215 GLU216 PRO217 SER218 GLY219
Unit 6 ASN1 ILE2 MET3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 ALA12 VAL13 SER14 ALA15 GLY16 GLU17 LYS18 VAL19 THR20 MET21 ASN22 CYS23 LYS24 SER25 SER26 GLN27 SER28 VAL29 LEU30 TYR31 SER32 SER33 ASN34 GLN35 LYS36 ASN37 TYR38 LEU39 ALA40 TRP41 TYR42 GLN43 GLN44 LYS45 PRO46 GLY47 GLN48 SER49 PRO50 LYS51 LEU52 LEU53 ILE54 TYR55 TRP56 ALA57 SER58 THR59 ARG60 GLU61 SER62 GLY63 VAL64 PRO65 ASP66 ARG67 PHE68 THR69 GLY70 SER71 GLY72 SER73 GLY74 THR75 ASP76 PHE77 THR78 LEU79 THR80 ILE81 SER82 SER83 VAL84 GLN85 THR86 GLU87 ASP88 LEU89 ALA90 VAL91 TYR92 TYR93 CYS94 HIS95 GLN96 TYR97 LEU98 SER99 SER100 TYR101 MET102 TYR103 THR104 PHE105 GLY106 GLY107 GLY108 THR109 LYS110 LEU111 GLU112 ILE113 LYS114 ARG115 ALA116 ASP117 ALA118 ALA119 PRO120 THR121 VAL122 SER123 ILE124 PHE125 PRO126 PRO127 SER128 SER129 GLU130 GLN131 LEU132 THR133 SER134 GLY135 GLY136 ALA137 SER138 VAL139 VAL140 CYS141 PHE142 LEU143 ASN144 ASN145 PHE146 TYR147 PRO148 LYS149 ASP150 ILE151 ASN152 VAL153 LYS154 TRP155 LYS156 ILE157 ASP158 GLY159 SER160 GLU161 ARG162 GLN163 ASN164 GLY165 VAL166 LEU167 ASN168 SER169 TRP170 THR171 ASP172 GLN173 ASP174 SER175 LYS176 ASP177 SER178 THR179 TYR180 SER181 MET182 SER183 SER184 THR185 LEU186 THR187 LEU188 THR189 LYS190 ASP191 GLU192 TYR193 GLU194 ARG195 HIS196 ASN197 SER198 TYR199 THR200 CYS201 GLU202 ALA203 THR204 HIS205 LYS206 THR207 SER208 THR209 SER210 PRO211 ILE212 VAL213 LYS214 SER215 PHE216 ASN217 ARG218 ASN219
Unit 7 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 ASP10 LEU11 VAL12 LYS13 PRO14 GLY15 GLY16 SER17 LEU18 LYS19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 GLY33 MET34 SER35 TRP36 VAL37 ARG38 GLN39 THR40 PRO41 ASP42 LYS43 ARG44 LEU45 GLU46 TRP47 VAL48 ALA49 THR50 ILE51 SER52 SER52A GLY53 GLY54 ASN55 TYR56 ILE57 TYR58 TYR59 PRO60 ASP61 THR62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 ARG71 ASP72 ASN73 ALA74 LYS75 ASN76 THR77 LEU78 TYR79 LEU80 GLN81 MET82 SER82A SER82B LEU82C LYS83 SER84 GLU85 ASP86 THR87 ALA88 MET89 TYR90 TYR91 CYS92 THR93 ARG94 GLU95 GLY96 ALA97 TYR98 SER99 GLY100 SER101 SER102 SER103 TYR104 PRO105G MET105H ASP106 TYR107 TRP108 GLY109 GLN110 GLY111 THR112 SER113 VAL114 THR115 VAL116 SER117 SER118 ALA119 LYS120 THR121 THR122 PRO123 PRO124 SER125 VAL126 TYR127 PRO128 LEU129 ALA130 PRO131 SER139 SER140 VAL141 THR142 LEU143 GLY144 CYS145 LEU146 VAL147 LYS148 GLY149 TYR150 PHE151 PRO152 GLU153 SER154 VAL155 THR156 VAL157 THR158 TRP159 ASN160 SER161 GLY162 SER163 SER166 SER167 VAL168 HIS169 THR170 PHE171 PRO172 ALA173 LEU174 LEU175 GLN176 SER177 GLY178 LEU179 TYR180 THR181 MET182 SER183 SER184 SER185 VAL186 THR187 VAL188 PRO189 SER190 SER191 THR192 TRP193 PRO194 SER195 GLN196 THR197 VAL198 THR199 CYS200 SER201 VAL202 ALA203 HIS204 PRO205 ALA206 SER207 SER208 THR209 THR210 VAL211 ASP212 LYS213 LYS214 LEU215 GLU216 PRO217 SER218 GLY219
Unit 8 ASN1 ILE2 MET3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 ALA12 VAL13 SER14 ALA15 GLY16 GLU17 LYS18 VAL19 THR20 MET21 ASN22 CYS23 LYS24 SER25 SER26 GLN27 SER28 VAL29 LEU30 TYR31 SER32 SER33 ASN34 GLN35 LYS36 ASN37 TYR38 LEU39 ALA40 TRP41 TYR42 GLN43 GLN44 LYS45 PRO46 GLY47 GLN48 SER49 PRO50 LYS51 LEU52 LEU53 ILE54 TYR55 TRP56 ALA57 SER58 THR59 ARG60 GLU61 SER62 GLY63 VAL64 PRO65 ASP66 ARG67 PHE68 THR69 GLY70 SER71 GLY72 SER73 GLY74 THR75 ASP76 PHE77 THR78 LEU79 THR80 ILE81 SER82 SER83 VAL84 GLN85 THR86 GLU87 ASP88 LEU89 ALA90 VAL91 TYR92 TYR93 CYS94 HIS95 GLN96 TYR97 LEU98 SER99 SER100 TYR101 MET102 TYR103 THR104 PHE105 GLY106 GLY107 GLY108 THR109 LYS110 LEU111 GLU112 ILE113 LYS114 ARG115 ALA116 ASP117 ALA118 ALA119 PRO120 THR121 VAL122 SER123 ILE124 PHE125 PRO126 PRO127 SER128 SER129 GLU130 GLN131 LEU132 THR133 SER134 GLY135 GLY136 ALA137 SER138 VAL139 VAL140 CYS141 PHE142 LEU143 ASN144 ASN145 PHE146 TYR147 PRO148 LYS149 ASP150 ILE151 ASN152 VAL153 LYS154 TRP155 LYS156 ILE157 ASP158 GLY159 SER160 GLU161 ARG162 GLN163 ASN164 GLY165 VAL166 LEU167 ASN168 SER169 TRP170 THR171 ASP172 GLN173 ASP174 SER175 LYS176 ASP177 SER178 THR179 TYR180 SER181 MET182 SER183 SER184 THR185 LEU186 THR187 LEU188 THR189 LYS190 ASP191 GLU192 TYR193 GLU194 ARG195 HIS196 ASN197 SER198 TYR199 THR200 CYS201 GLU202 ALA203 THR204 HIS205 LYS206 THR207 SER208 THR209 SER210 PRO211 ILE212 VAL213 LYS214 SER215 PHE216 ASN217 ARG218 ASN219

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany