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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE C13.18 RNA APTAMER IN COMPLEX WITH G PROTEI RECEPTOR KINASE 2
Keywords PROTEIN-RNA COMPLEX, PROTEIN KINASE FOLD, RGS HOMOLOGY DOMAI PLECKSTRIN HOMOLOGY DOMAIN, G PROTEIN-COUPLED RECEPTOR PHOSPHORYLATION, RNA APTAMER, TRANSFERASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3UZT     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-ADRENERGIC RECEPTOR KINASE 1  A 586 4809 0
2  DNA/RNA    B 7 125 0
3  Ligand   BETA-ADRENERGIC RECEPTOR KINASE 1  A 1 0 1
total       594 4934 1

Proteins
Unit 1 LYS30 LYS31 ILE32 LEU33 LEU34 PRO35 GLU36 PRO37 SER38 ILE39 ARG40 SER41 VAL42 MET43 GLN44 LYS45 TYR46 LEU47 GLU48 ASP49 ARG50 GLY51 GLU52 VAL53 THR54 PHE55 GLU56 LYS57 ILE58 PHE59 SER60 GLN61 LYS62 LEU63 GLY64 TYR65 LEU66 LEU67 PHE68 ARG69 ASP70 PHE71 CYS72 LEU73 LYS74 HIS75 LEU76 GLU77 GLU78 ALA79 LYS80 PRO81 LEU82 VAL83 GLU84 PHE85 TYR86 GLU87 GLU88 ILE89 LYS90 LYS91 TYR92 GLU93 LYS94 LEU95 GLU96 THR97 GLU98 GLU99 GLU100 ARG101 LEU102 VAL103 CYS104 SER105 ARG106 GLU107 ILE108 PHE109 ASP110 THR111 TYR112 ILE113 MET114 LYS115 GLU116 LEU117 LEU118 ALA119 CYS120 SER121 HIS122 PRO123 PHE124 SER125 LYS126 SER127 ALA128 ILE129 GLU130 HIS131 VAL132 GLN133 GLY134 HIS135 LEU136 VAL137 LYS138 LYS139 GLN140 VAL141 PRO142 PRO143 ASP144 LEU145 PHE146 GLN147 PRO148 TYR149 ILE150 GLU151 GLU152 ILE153 CYS154 GLN155 ASN156 LEU157 ARG158 GLY159 ASP160 VAL161 PHE162 GLN163 LYS164 PHE165 ILE166 GLU167 SER168 ASP169 LYS170 PHE171 THR172 ARG173 PHE174 CYS175 GLN176 TRP177 LYS178 ASN179 VAL180 GLU181 LEU182 ASN183 ILE184 HIS185 LEU186 THR187 MET188 ASN189 ASP190 PHE191 SER192 VAL193 HIS194 ARG195 ILE196 ILE197 GLY198 ARG199 GLY200 GLY201 PHE202 GLY203 GLU204 VAL205 TYR206 GLY207 CYS208 ARG209 LYS210 ALA211 ASP212 THR213 GLY214 LYS215 MET216 TYR217 ALA218 MET219 LYS220 CYS221 LEU222 ASP223 LYS224 LYS225 ARG226 ILE227 LYS228 MET229 LYS230 GLN231 GLY232 GLU233 THR234 LEU235 ALA236 LEU237 ASN238 GLU239 ARG240 ILE241 MET242 LEU243 SER244 LEU245 VAL246 SER247 THR248 GLY249 ASP250 CYS251 PRO252 PHE253 ILE254 VAL255 CYS256 MET257 SER258 TYR259 ALA260 PHE261 HIS262 THR263 PRO264 ASP265 LYS266 LEU267 SER268 PHE269 ILE270 LEU271 ASP272 LEU273 MET274 ASN275 GLY276 GLY277 ASP278 LEU279 HIS280 TYR281 HIS282 LEU283 SER284 GLN285 HIS286 GLY287 VAL288 PHE289 SER290 GLU291 ALA292 ASP293 MET294 ARG295 PHE296 TYR297 ALA298 ALA299 GLU300 ILE301 ILE302 LEU303 GLY304 LEU305 GLU306 HIS307 MET308 HIS309 ASN310 ARG311 PHE312 VAL313 VAL314 TYR315 ARG316 ASP317 LEU318 LYS319 PRO320 ALA321 ASN322 ILE323 LEU324 LEU325 ASP326 GLU327 HIS328 GLY329 HIS330 VAL331 ARG332 ILE333 SER334 ASP335 LEU336 GLY337 LEU338 ALA339 CYS340 ASP341 PHE342 SER343 LYS344 LYS345 LYS346 PRO347 HIS348 ALA349 SER350 VAL351 GLY352 THR353 HIS354 GLY355 TYR356 MET357 ALA358 PRO359 GLU360 VAL361 LEU362 GLN363 LYS364 GLY365 VAL366 ALA367 TYR368 ASP369 SER370 SER371 ALA372 ASP373 TRP374 PHE375 SER376 LEU377 GLY378 CYS379 MET380 LEU381 PHE382 LYS383 LEU384 LEU385 ARG386 GLY387 HIS388 SER389 PRO390 PHE391 ARG392 GLN393 HIS394 LYS395 THR396 LYS397 ASP398 VAL411 GLU412 LEU413 PRO414 ASP415 SER416 PHE417 SER418 PRO419 GLU420 LEU421 ARG422 SER423 LEU424 LEU425 GLU426 GLY427 LEU428 LEU429 GLN430 ARG431 ASP432 VAL433 ASN434 ARG435 ARG436 LEU437 GLY438 CYS439 LEU440 GLY441 ARG442 GLY443 ALA444 GLN445 GLU446 VAL447 LYS448 GLU449 SER450 PRO451 PHE452 PHE453 ARG454 SER455 LEU456 ASP457 TRP458 GLN459 MET460 VAL461 PHE462 LEU463 GLN464 LYS465 TYR466 PRO467 PRO468 PRO469 LEU470 ILE471 PRO472 PRO473 ARG474 GLY475 ASP492 THR493 LYS494 GLY495 ILE496 LYS497 LEU498 LEU499 ASP500 SER501 ASP502 GLN503 GLU504 LEU505 TYR506 ARG507 ASN508 PHE509 PRO510 LEU511 THR512 ILE513 SER514 GLU515 ARG516 TRP517 GLN518 GLN519 GLU520 VAL521 ALA522 GLU523 THR524 VAL525 PHE526 ASP527 THR528 ILE529 ASN530 ALA531 GLU532 THR533 ASP534 ARG535 LEU536 GLU537 ALA538 ARG539 LYS540 LYS541 THR542 LYS543 ASN544 LYS545 ASP552 TYR553 ALA554 LEU555 GLY556 LYS557 ASP558 CYS559 ILE560 MET561 HIS562 GLY563 TYR564 MET565 SER566 LYS567 MET568 TRP576 GLN577 ARG578 ARG579 TYR580 PHE581 TYR582 LEU583 PHE584 PRO585 ASN586 ARG587 LEU588 GLU589 TRP590 ARG591 GLY592 GLU593 GLY594 GLU595 ALA596 PRO597 GLN598 SER599 LEU600 LEU601 THR602 MET603 GLU604 GLU605 ILE606 GLN607 SER608 VAL609 GLU610 GLU611 THR612 GLN613 ILE614 LYS615 GLU616 ARG617 LYS618 CYS619 LEU620 LEU621 LEU622 LYS623 ILE624 ARG625 GLY626 GLY627 LYS628 GLN629 PHE630 VAL631 LEU632 GLN633 CYS634 ASP635 SER636 ASP637 PRO638 GLU639 LEU640 VAL641 GLN642 TRP643 LYS644 LYS645 GLU646 LEU647 ARG648 ASP649 ALA650 TYR651 ARG652 GLU653 ALA654 GLN655 GLN656

Nucleic acids
Unit 2 C47 C48 A49 U50 A51 C52 G53

Ligands
Unit 3 MG690

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany