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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A DIMERIC MYOTOXIC COMPONENT OF THE VIP AMMODYTES MERIDIONALIS VENOM REVEALS DETERMINANTS OF MYOTOX MEMBRANE DAMAGING ACTIVITY
Keywords TOXIN, SNAKE VENOM, SER49 MYOTOXIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3UX7     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AMMODYTIN L(1) ISOFORM  A 122 933 0
2  Protein   AMMODYTIN L(1) ISOFORM  B 122 932 0
3  Protein   AMMODYTIN L(1) ISOFORM  C 122 933 0
4  Protein   AMMODYTIN L(1) ISOFORM  D 122 933 0
5  Protein   AMMODYTIN L(1) ISOFORM  E 122 933 0
6  Protein   AMMODYTIN L(1) ISOFORM  F 122 933 0
7  Protein   AMMODYTIN L(1) ISOFORM  G 122 933 0
8  Protein   AMMODYTIN L(1) ISOFORM  H 122 933 0
9  Ligand   AMMODYTIN L(1) ISOFORM  A 4 0 20
10  Ligand   AMMODYTIN L(1) ISOFORM  B 2 0 10
11  Ligand   AMMODYTIN L(1) ISOFORM  C 2 0 10
12  Ligand   AMMODYTIN L(1) ISOFORM  D 2 0 10
13  Ligand   AMMODYTIN L(1) ISOFORM  E 1 0 5
14  Ligand   AMMODYTIN L(1) ISOFORM  F 3 0 15
15  Ligand   AMMODYTIN L(1) ISOFORM  G 3 0 15
16  Ligand   AMMODYTIN L(1) ISOFORM  H 2 0 10
17 Water     90 0 90
total       1085 7463 185

Proteins
Unit 1 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 2 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 3 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 4 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 5 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 6 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 7 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122
Unit 8 SER1 VAL2 ILE3 GLU4 PHE5 GLY6 LYS7 MET8 ILE9 GLN10 GLU11 GLU12 THR13 ASP14 LYS15 ASN16 PRO17 LEU18 THR19 SER20 TYR21 SER22 PHE23 TYR24 GLY25 CYS26 HIS27 CYS28 GLY29 LEU30 GLY31 ASN32 GLY33 GLY34 LYS35 PRO36 LYS37 ASP38 ALA39 THR40 ASP41 ARG42 CYS43 CYS44 PHE45 VAL46 HIS47 SER48 CYS49 CYS50 TYR51 ALA52 SER53 LEU54 SER55 ASP56 CYS57 SER58 PRO59 ALA60 THR61 ASN62 ARG63 TYR64 SER65 TYR66 HIS67 LYS68 GLU69 GLY70 GLY71 ALA72 ILE73 VAL74 CYS75 GLY76 SER77 SER78 THR79 PRO80 CYS81 LYS82 GLY83 GLN84 ILE85 CYS86 GLU87 CYS88 ASP89 LYS90 ALA91 ALA92 ALA93 ILE94 CYS95 PHE96 LYS97 GLU98 ASN99 LEU100 LYS101 THR102 TYR103 ASN104 LYS105 LYS106 TYR107 LYS108 VAL109 TYR110 LEU111 ARG112 PHE113 LYS114 CYS115 LYS116 GLY117 VAL118 SER119 GLU120 LYS121 CYS122

Ligands
Unit 9 SO4123 SO4124 SO4125 SO4126
Unit 10 SO4123 SO4124
Unit 11 SO4123 SO4124
Unit 12 SO4123 SO4124
Unit 13 SO4123
Unit 14 SO4123 SO4124 SO4125
Unit 15 SO4123 SO4124 SO4125
Unit 16 SO4123 SO4124

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany