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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MURINE NOROVIRUS RNA-DEPENDENT RNA POLY BOUND TO NF023
Keywords MURINE NOROVIRUS, RNA-DEPENDENT RNA POLYMERASE, TRANSFERASE- TRANSFERASE INHIBITOR COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3UPF     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA-DEPENDENT RNA POLYMERASE  A 476 3793 0
2  Protein   RNA-DEPENDENT RNA POLYMERASE  B 483 3833 0
3  Protein   RNA-DEPENDENT RNA POLYMERASE  C 471 3750 0
4  Ligand   RNA-DEPENDENT RNA POLYMERASE  A 2 0 71
5  Ligand   RNA-DEPENDENT RNA POLYMERASE  B 3 0 76
6  Ligand   RNA-DEPENDENT RNA POLYMERASE  C 5 0 86
7 Water     625 0 625
total       2065 11376 858
Proteins
Unit 1 LEU2 PRO3 ARG4 PRO5 SER6 GLY7 THR8 TYR9 ALA10 GLY11 LEU12 PRO13 ILE14 ALA15 ASP16 TYR17 GLY18 ASP19 ALA20 PRO21 PRO22 LEU23 SER24 THR25 LYS26 THR27 MET28 PHE29 TRP30 ARG31 THR32 SER33 PRO34 GLU35 LYS36 LEU37 PRO38 PRO39 GLY40 ALA41 TRP42 GLU43 PRO44 ALA45 TYR46 LEU47 GLY48 SER49 LYS50 ASP51 GLU52 ARG53 VAL54 ASP55 GLY56 PRO57 SER58 LEU59 GLN60 GLN61 VAL62 MET63 ARG64 ASP65 GLN66 LEU67 LYS68 PRO69 TYR70 SER71 GLU72 PRO73 ARG74 GLY75 LEU76 LEU77 PRO78 PRO79 GLN80 GLU81 ILE82 LEU83 ASP84 ALA85 VAL86 CYS87 ASP88 ALA89 ILE90 GLU91 ASN92 ARG93 LEU94 GLU95 ASN96 THR97 LEU98 GLU99 PRO100 GLN101 LYS102 PRO103 TRP104 THR105 PHE106 LYS107 LYS108 ALA109 CYS110 GLU111 SER112 LEU113 ASP114 LYS115 ASN116 THR117 SER118 SER119 GLY120 TYR121 PRO122 TYR123 HIS124 LYS125 GLN126 LYS127 SER128 LYS129 ASP130 TRP131 THR132 GLY133 SER134 ALA135 PHE136 ILE137 GLY138 ASP139 LEU140 GLY141 ASP142 GLN143 ALA144 THR145 HIS146 ALA147 ASN148 ASN149 MET150 TYR151 GLU152 MET153 GLY154 LYS155 SER156 MET157 ARG158 PRO159 ILE160 TYR161 THR162 ALA163 ALA164 LEU165 LYS166 ASP167 GLU168 LEU169 VAL170 LYS171 PRO172 ASP173 LYS174 ILE175 TYR176 GLY177 LYS178 ILE179 LYS180 LYS181 ARG182 LEU183 LEU184 TRP185 GLY186 SER187 ASP188 LEU189 GLY190 THR191 MET192 ILE193 ARG194 ALA195 ALA196 ARG197 ALA198 PHE199 GLY200 PRO201 PHE202 CYS203 ASP204 ALA205 LEU206 LYS207 GLU208 THR209 CYS210 ILE211 PHE212 ASN213 PRO214 ILE215 ARG216 VAL217 GLY218 MET219 SER220 MET221 ASN222 GLU223 ASP224 GLY225 PRO226 PHE227 ILE228 PHE229 ALA230 ARG231 HIS232 ALA233 ASN234 PHE235 ARG236 TYR237 HIS238 MET239 ASP240 ALA241 ASP242 TYR243 THR244 ARG245 TRP246 ASP247 SER248 THR249 GLN250 GLN251 ARG252 ALA253 ILE254 LEU255 LYS256 ARG257 ALA258 GLY259 ASP260 ILE261 MET262 VAL263 ARG264 LEU265 SER266 PRO267 GLU268 PRO269 ASP270 LEU271 ALA272 ARG273 VAL274 VAL275 MET276 ASP277 ASP278 LEU279 LEU280 ALA281 PRO282 SER283 LEU284 LEU285 ASP286 VAL287 GLY288 ASP289 TYR290 LYS291 ILE292 VAL293 VAL294 GLU295 GLU296 GLY297 LEU298 PRO299 SER300 CYS302 PRO303 CYS304 THR305 THR306 GLN307 LEU308 ASN309 SER310 LEU311 ALA312 HIS313 TRP314 ILE315 LEU316 THR317 LEU318 CYS319 ALA320 MET321 VAL322 GLU323 VAL324 THR325 ARG326 VAL327 ASP328 PRO329 ASP330 ILE331 VAL332 MET333 GLN334 GLU335 SER336 GLU337 PHE338 SER339 PHE340 TYR341 GLY342 ASP343 ASP344 GLU345 VAL346 VAL347 SER348 THR349 ASN350 LEU351 GLU352 LEU353 ASP354 MET355 VAL356 LYS357 TYR358 THR359 MET360 ALA361 LEU362 ARG363 ARG364 TYR365 GLY366 LEU367 LEU368 PRO369 THR370 ARG371 ALA372 ASP373 LYS374 GLU375 GLU376 PRO378 LEU379 GLU380 ARG381 ARG382 GLN383 THR384 LEU385 GLN386 GLY387 ILE388 SER389 PHE390 LEU391 ARG392 ARG393 ALA394 ILE395 VAL396 GLY397 ASP398 GLN399 PHE400 GLY401 TRP402 TYR403 GLY404 ARG405 LEU406 ASP407 ARG408 ALA409 SER410 ILE411 ASP412 ARG413 GLN414 LEU415 LEU416 TRP417 THR418 LYS419 GLY420 PRO421 ASN422 HIS423 GLN424 ASN425 PRO426 PHE427 GLU428 THR429 LEU430 PRO431 GLY432 HIS433 ARG436 PRO437 GLN439 LEU440 MET441 ALA442 LEU443 LEU444 GLY445 GLU446 ALA447 ALA448 MET449 HIS450 GLY451 GLU452 LYS453 TYR454 TYR455 ARG456 THR457 VAL458 ALA459 SER460 ARG461 VAL462 SER463 LYS464 GLU465 ALA466 ALA467 VAL474 VAL475 PRO476 ARG477 HIS478 ARG479 SER480 VAL481 LEU482 ARG483 TRP484 VAL485 ARG486 PHE487 GLY488
Unit 2 LEU2 PRO3 ARG4 PRO5 SER6 GLY7 THR8 TYR9 ALA10 GLY11 LEU12 PRO13 ILE14 ALA15 ASP16 TYR17 GLY18 ASP19 ALA20 PRO21 PRO22 LEU23 SER24 THR25 LYS26 THR27 MET28 PHE29 TRP30 ARG31 THR32 SER33 PRO34 GLU35 LYS36 LEU37 PRO38 PRO39 GLY40 ALA41 TRP42 GLU43 PRO44 ALA45 TYR46 LEU47 GLY48 SER49 LYS50 ASP51 GLU52 ARG53 VAL54 ASP55 GLY56 PRO57 SER58 LEU59 GLN60 GLN61 VAL62 MET63 ARG64 ASP65 GLN66 LEU67 LYS68 PRO69 TYR70 SER71 GLU72 PRO73 ARG74 GLY75 LEU76 LEU77 PRO78 PRO79 GLN80 GLU81 ILE82 LEU83 ASP84 ALA85 VAL86 CYS87 ASP88 ALA89 ILE90 GLU91 ASN92 ARG93 LEU94 GLU95 ASN96 THR97 LEU98 GLU99 PRO100 GLN101 LYS102 PRO103 TRP104 THR105 PHE106 LYS107 LYS108 ALA109 CYS110 GLU111 SER112 LEU113 ASP114 LYS115 ASN116 THR117 SER118 SER119 GLY120 TYR121 PRO122 TYR123 HIS124 LYS125 GLN126 LYS127 SER128 LYS129 ASP130 TRP131 THR132 GLY133 SER134 ALA135 PHE136 ILE137 GLY138 ASP139 LEU140 GLY141 ASP142 GLN143 ALA144 THR145 HIS146 ALA147 ASN148 ASN149 MET150 TYR151 GLU152 MET153 GLY154 LYS155 SER156 MET157 ARG158 PRO159 ILE160 TYR161 THR162 ALA163 ALA164 LEU165 LYS166 ASP167 GLU168 LEU169 VAL170 LYS171 PRO172 ASP173 LYS174 ILE175 TYR176 GLY177 LYS178 ILE179 LYS180 LYS181 ARG182 LEU183 LEU184 TRP185 GLY186 SER187 ASP188 LEU189 GLY190 THR191 MET192 ILE193 ARG194 ALA195 ALA196 ARG197 ALA198 PHE199 GLY200 PRO201 PHE202 CYS203 ASP204 ALA205 LEU206 LYS207 GLU208 THR209 CYS210 ILE211 PHE212 ASN213 PRO214 ILE215 ARG216 VAL217 GLY218 MET219 SER220 MET221 ASN222 GLU223 ASP224 GLY225 PRO226 PHE227 ILE228 PHE229 ALA230 ARG231 HIS232 ALA233 ASN234 PHE235 ARG236 TYR237 HIS238 MET239 ASP240 ALA241 ASP242 TYR243 THR244 ARG245 TRP246 ASP247 SER248 THR249 GLN250 GLN251 ARG252 ALA253 ILE254 LEU255 LYS256 ARG257 ALA258 GLY259 ASP260 ILE261 MET262 VAL263 ARG264 LEU265 SER266 PRO267 GLU268 PRO269 ASP270 LEU271 ALA272 ARG273 VAL274 VAL275 MET276 ASP277 ASP278 LEU279 LEU280 ALA281 PRO282 SER283 LEU284 LEU285 ASP286 VAL287 GLY288 ASP289 TYR290 LYS291 ILE292 VAL293 VAL294 GLU295 GLU296 GLY297 LEU298 PRO299 SER300 GLY301 CYS302 CYS304 THR305 THR306 GLN307 LEU308 ASN309 SER310 LEU311 ALA312 HIS313 TRP314 ILE315 LEU316 THR317 LEU318 CYS319 ALA320 MET321 VAL322 GLU323 VAL324 THR325 ARG326 VAL327 ASP328 PRO329 ASP330 ILE331 VAL332 MET333 GLN334 GLU335 SER336 GLU337 PHE338 SER339 PHE340 TYR341 GLY342 ASP343 ASP344 GLU345 VAL346 VAL347 SER348 THR349 ASN350 LEU351 GLU352 LEU353 ASP354 MET355 VAL356 LYS357 TYR358 THR359 MET360 ALA361 LEU362 ARG363 ARG364 TYR365 GLY366 LEU367 LEU368 PRO369 THR370 ARG371 ALA372 ASP373 LYS374 GLU375 GLU376 GLY377 PRO378 LEU379 GLU380 ARG381 ARG382 GLN383 THR384 LEU385 GLN386 GLY387 ILE388 SER389 PHE390 LEU391 ARG392 ARG393 ALA394 ILE395 VAL396 GLY397 ASP398 GLN399 PHE400 GLY401 TRP402 TYR403 GLY404 ARG405 LEU406 ASP407 ARG408 ALA409 SER410 ILE411 ASP412 ARG413 GLN414 LEU415 LEU416 TRP417 THR418 LYS419 GLY420 PRO421 ASN422 HIS423 GLN424 ASN425 PRO426 PHE427 GLU428 THR429 LEU430 PRO431 GLY432 HIS433 ALA434 GLN435 ARG436 PRO437 SER438 GLN439 LEU440 MET441 ALA442 LEU443 LEU444 GLY445 GLU446 ALA447 ALA448 MET449 HIS450 GLY451 GLU452 LYS453 TYR454 TYR455 ARG456 THR457 VAL458 ALA459 SER460 ARG461 VAL462 SER463 LYS464 GLU465 ALA466 ALA467 GLN468 SER469 GLY470 VAL474 VAL475 PRO476 ARG477 HIS478 ARG479 SER480 VAL481 LEU482 ARG483 TRP484 VAL485 ARG486 PHE487 GLY488
Unit 3 PRO5 SER6 GLY7 THR8 TYR9 ALA10 GLY11 LEU12 PRO13 ILE14 ALA15 ASP16 TYR17 GLY18 ASP19 ALA20 PRO21 PRO22 LEU23 SER24 THR25 LYS26 THR27 MET28 PHE29 TRP30 ARG31 THR32 SER33 PRO34 GLU35 LYS36 LEU37 PRO38 PRO39 GLY40 ALA41 TRP42 GLU43 PRO44 ALA45 TYR46 LEU47 GLY48 SER49 LYS50 ASP51 GLU52 ARG53 VAL54 ASP55 GLY56 PRO57 SER58 LEU59 GLN60 GLN61 VAL62 MET63 ARG64 ASP65 GLN66 LEU67 LYS68 PRO69 TYR70 SER71 GLU72 PRO73 ARG74 GLY75 LEU76 LEU77 PRO78 PRO79 GLN80 GLU81 ILE82 LEU83 ASP84 ALA85 VAL86 CYS87 ASP88 ALA89 ILE90 GLU91 ASN92 ARG93 LEU94 GLU95 ASN96 THR97 LEU98 GLU99 PRO100 GLN101 LYS102 PRO103 TRP104 THR105 PHE106 LYS107 LYS108 ALA109 CYS110 GLU111 SER112 LEU113 ASP114 LYS115 ASN116 THR117 SER118 SER119 GLY120 TYR121 PRO122 TYR123 HIS124 LYS125 GLN126 LYS127 SER128 LYS129 ASP130 TRP131 THR132 GLY133 SER134 ALA135 PHE136 ILE137 GLY138 ASP139 LEU140 GLY141 ASP142 GLN143 ALA144 THR145 HIS146 ALA147 ASN148 ASN149 MET150 TYR151 GLU152 MET153 GLY154 LYS155 SER156 MET157 ARG158 PRO159 ILE160 TYR161 THR162 ALA163 ALA164 LEU165 LYS166 ASP167 GLU168 LEU169 VAL170 LYS171 PRO172 ASP173 LYS174 ILE175 TYR176 GLY177 LYS178 ILE179 LYS180 LYS181 ARG182 LEU183 LEU184 TRP185 GLY186 SER187 ASP188 LEU189 GLY190 THR191 MET192 ILE193 ARG194 ALA195 ALA196 ARG197 ALA198 PHE199 GLY200 PRO201 PHE202 CYS203 ASP204 ALA205 LEU206 LYS207 GLU208 THR209 CYS210 ILE211 PHE212 ASN213 PRO214 ILE215 ARG216 VAL217 GLY218 MET219 SER220 MET221 ASN222 GLU223 ASP224 GLY225 PRO226 PHE227 ILE228 PHE229 ALA230 ARG231 HIS232 ALA233 ASN234 PHE235 ARG236 TYR237 HIS238 MET239 ASP240 ALA241 ASP242 TYR243 THR244 ARG245 TRP246 ASP247 SER248 THR249 GLN250 GLN251 ARG252 ALA253 ILE254 LEU255 LYS256 ARG257 ALA258 GLY259 ASP260 ILE261 MET262 VAL263 ARG264 LEU265 SER266 PRO267 GLU268 PRO269 ASP270 LEU271 ALA272 ARG273 VAL274 VAL275 MET276 ASP277 ASP278 LEU279 LEU280 ALA281 PRO282 SER283 LEU284 LEU285 ASP286 VAL287 GLY288 ASP289 TYR290 LYS291 ILE292 VAL293 VAL294 GLU295 GLU296 GLY297 LEU298 PRO299 SER300 GLY301 CYS302 THR305 THR306 GLN307 LEU308 ASN309 SER310 LEU311 ALA312 HIS313 TRP314 ILE315 LEU316 THR317 LEU318 CYS319 ALA320 MET321 VAL322 GLU323 VAL324 THR325 ARG326 VAL327 ASP328 PRO329 ASP330 ILE331 VAL332 MET333 GLN334 GLU335 SER336 GLU337 PHE338 SER339 PHE340 TYR341 GLY342 ASP343 ASP344 GLU345 VAL346 VAL347 SER348 THR349 ASN350 LEU351 GLU352 LEU353 ASP354 MET355 VAL356 LYS357 TYR358 THR359 MET360 ALA361 LEU362 ARG363 ARG364 TYR365 GLY366 LEU367 LEU368 PRO369 THR370 ARG371 ALA372 ASP373 LYS374 GLU375 GLU376 GLY377 PRO378 LEU379 GLU380 ARG381 ARG382 GLN383 THR384 LEU385 GLN386 GLY387 ILE388 SER389 PHE390 LEU391 ARG392 ARG393 ALA394 ILE395 VAL396 GLY397 ASP398 GLN399 PHE400 GLY401 TRP402 TYR403 GLY404 ARG405 LEU406 ASP407 ARG408 ALA409 SER410 ILE411 ASP412 ARG413 GLN414 LEU415 LEU416 TRP417 THR418 LYS419 GLY420 PRO421 ASN422 HIS423 GLN424 ASN425 PRO426 PHE427 GLU428 THR429 LEU430 PRO431 GLY432 GLN435 ARG436 PRO437 SER438 GLN439 LEU440 MET441 ALA442 LEU443 LEU444 GLY445 GLU446 ALA447 ALA448 MET449 HIS450 GLY451 GLU452 LYS453 TYR454 TYR455 ARG456 THR457 VAL458 ALA459 SER460 ARG461 VAL462 SER463 LYS464 GLU465 VAL475 PRO476 ARG477 HIS478 ARG479 SER480 VAL481 LEU482 ARG483 TRP484 VAL485 ARG486 PHE487 GLY488
Ligands
Unit 4 SO4516 0BU600
Unit 5 SO4516 SO4517 0BU600
Unit 6 SO4516 SO4517 SO4518 SO4519 0BU600
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany