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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HUMAN COLONY-STIMULATING FACTOR 1 ( CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1
Keywords VIRAL RECEPTOR, RTKIII, EXTRACELLULAR, CYTOKINE RECEPTOR-CYT COMPLEX, CYTOKINE, FOUR-HELIX BUNDLE, GLYCOPROTEIN, IMMUNOG DOMAIN, ONCOGENE, RECEPTOR, CYTOKINE/SIGNALING, PROTEIN COM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3UEZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SECRETED PROTEIN BARF1  A 185 1477 0
2  Protein   SECRETED PROTEIN BARF1  B 185 1481 0
3  Protein   SECRETED PROTEIN BARF1  C 186 1483 0
4  Protein   SECRETED PROTEIN BARF1  D 186 1487 0
5  Protein   MACROPHAGE COLONY-STIMULATING FACTOR 1  E 142 1159 0
6  Protein   MACROPHAGE COLONY-STIMULATING FACTOR 1  F 141 1150 0
7  Protein   MACROPHAGE COLONY-STIMULATING FACTOR 1  G 143 1168 0
8  Protein   MACROPHAGE COLONY-STIMULATING FACTOR 1  H 139 1126 0
9  Ligand    I 3 0 39
10  Ligand    J 3 0 39
11  Ligand    K 3 0 39
12  Ligand    L 3 0 39
total       1319 10531 156

Proteins
Unit 1 VAL21 THR22 ALA23 PHE24 LEU25 GLY26 GLU27 ARG28 VAL29 THR30 LEU31 THR32 SER33 TYR34 TRP35 ARG36 ARG37 VAL38 SER39 LEU40 GLY41 PRO42 GLU43 ILE44 GLU45 VAL46 SER47 TRP48 PHE49 LYS50 LEU51 GLY52 PRO53 GLY54 GLU55 GLU56 GLN57 VAL58 LEU59 ILE60 GLY61 ARG62 MET63 HIS64 HIS65 ASP66 VAL67 ILE68 PHE69 ILE70 GLU71 TRP72 PRO73 PHE74 ARG75 GLY76 PHE77 PHE78 ASP79 ILE80 HIS81 ARG82 SER83 ALA84 ASN85 THR86 PHE87 PHE88 LEU89 VAL90 VAL91 THR92 ALA93 ALA94 ASN95 ILE96 SER97 HIS98 ASP99 GLY100 ASN101 TYR102 LEU103 CYS104 ARG105 MET106 LYS107 LEU108 GLY109 GLU110 THR111 GLU112 VAL113 THR114 LYS115 GLN116 GLU117 HIS118 LEU119 SER120 VAL121 VAL122 LYS123 PRO124 LEU125 THR126 LEU127 SER128 VAL129 HIS130 SER131 GLU132 ARG133 SER134 GLN135 PHE136 PRO137 ASP138 PHE139 SER140 VAL141 LEU142 THR143 VAL144 THR145 CYS146 THR147 VAL148 ASN149 ALA150 PHE151 PRO152 HIS153 PRO154 HIS155 VAL156 GLN157 TRP158 LEU159 MET160 VAL175 MET176 LYS177 GLU178 LYS179 ASP180 GLY181 SER182 LEU183 SER184 VAL185 ALA186 VAL187 ASP188 LEU189 SER190 LEU191 PRO192 LYS193 PRO194 TRP195 HIS196 LEU197 PRO198 VAL199 THR200 CYS201 VAL202 GLY203 LYS204 ASN205 ASP206 LYS207 GLU208 GLU209 ALA210 HIS211 GLY212 VAL213 TYR214 VAL215 SER216 GLY217 TYR218 LEU219
Unit 2 VAL21 THR22 ALA23 PHE24 LEU25 GLY26 GLU27 ARG28 VAL29 THR30 LEU31 THR32 SER33 TYR34 TRP35 ARG36 ARG37 VAL38 SER39 LEU40 GLY41 PRO42 GLU43 ILE44 GLU45 VAL46 SER47 TRP48 PHE49 LYS50 LEU51 GLY52 PRO53 GLY54 GLU55 GLU56 GLN57 VAL58 LEU59 ILE60 GLY61 ARG62 MET63 HIS64 HIS65 ASP66 VAL67 ILE68 PHE69 ILE70 GLU71 TRP72 PRO73 PHE74 ARG75 GLY76 PHE77 PHE78 ASP79 ILE80 HIS81 ARG82 SER83 ALA84 ASN85 THR86 PHE87 PHE88 LEU89 VAL90 VAL91 THR92 ALA93 ALA94 ASN95 ILE96 SER97 HIS98 ASP99 GLY100 ASN101 TYR102 LEU103 CYS104 ARG105 MET106 LYS107 LEU108 GLY109 GLU110 THR111 GLU112 VAL113 THR114 LYS115 GLN116 GLU117 HIS118 LEU119 SER120 VAL121 VAL122 LYS123 PRO124 LEU125 THR126 LEU127 SER128 VAL129 HIS130 SER131 GLU132 ARG133 SER134 GLN135 PHE136 PRO137 ASP138 PHE139 SER140 VAL141 LEU142 THR143 VAL144 THR145 CYS146 THR147 VAL148 ASN149 ALA150 PHE151 PRO152 HIS153 PRO154 HIS155 VAL156 GLN157 TRP158 LEU159 MET160 VAL175 MET176 LYS177 GLU178 LYS179 ASP180 GLY181 SER182 LEU183 SER184 VAL185 ALA186 VAL187 ASP188 LEU189 SER190 LEU191 PRO192 LYS193 PRO194 TRP195 HIS196 LEU197 PRO198 VAL199 THR200 CYS201 VAL202 GLY203 LYS204 ASN205 ASP206 LYS207 GLU208 GLU209 ALA210 HIS211 GLY212 VAL213 TYR214 VAL215 SER216 GLY217 TYR218 LEU219
Unit 3 VAL21 THR22 ALA23 PHE24 LEU25 GLY26 GLU27 ARG28 VAL29 THR30 LEU31 THR32 SER33 TYR34 TRP35 ARG36 ARG37 VAL38 SER39 LEU40 GLY41 PRO42 GLU43 ILE44 GLU45 VAL46 SER47 TRP48 PHE49 LYS50 LEU51 GLY52 PRO53 GLY54 GLU55 GLU56 GLN57 VAL58 LEU59 ILE60 GLY61 ARG62 MET63 HIS64 HIS65 ASP66 VAL67 ILE68 PHE69 ILE70 GLU71 TRP72 PRO73 PHE74 ARG75 GLY76 PHE77 PHE78 ASP79 ILE80 HIS81 ARG82 SER83 ALA84 ASN85 THR86 PHE87 PHE88 LEU89 VAL90 VAL91 THR92 ALA93 ALA94 ASN95 ILE96 SER97 HIS98 ASP99 GLY100 ASN101 TYR102 LEU103 CYS104 ARG105 MET106 LYS107 LEU108 GLY109 GLU110 THR111 GLU112 VAL113 THR114 LYS115 GLN116 GLU117 HIS118 LEU119 SER120 VAL121 VAL122 LYS123 PRO124 LEU125 THR126 LEU127 SER128 VAL129 HIS130 SER131 GLU132 ARG133 SER134 GLN135 PHE136 PRO137 ASP138 PHE139 SER140 VAL141 LEU142 THR143 VAL144 THR145 CYS146 THR147 VAL148 ASN149 ALA150 PHE151 PRO152 HIS153 PRO154 HIS155 VAL156 GLN157 TRP158 LEU159 MET160 VAL175 MET176 LYS177 GLU178 LYS179 ASP180 GLY181 SER182 LEU183 SER184 VAL185 ALA186 VAL187 ASP188 LEU189 SER190 LEU191 PRO192 LYS193 PRO194 TRP195 HIS196 LEU197 PRO198 VAL199 THR200 CYS201 VAL202 GLY203 LYS204 ASN205 ASP206 LYS207 GLU208 GLU209 ALA210 HIS211 GLY212 VAL213 TYR214 VAL215 SER216 GLY217 TYR218 LEU219 SER220
Unit 4 VAL21 THR22 ALA23 PHE24 LEU25 GLY26 GLU27 ARG28 VAL29 THR30 LEU31 THR32 SER33 TYR34 TRP35 ARG36 ARG37 VAL38 SER39 LEU40 GLY41 PRO42 GLU43 ILE44 GLU45 VAL46 SER47 TRP48 PHE49 LYS50 LEU51 GLY52 PRO53 GLY54 GLU55 GLU56 GLN57 VAL58 LEU59 ILE60 GLY61 ARG62 MET63 HIS64 HIS65 ASP66 VAL67 ILE68 PHE69 ILE70 GLU71 TRP72 PRO73 PHE74 ARG75 GLY76 PHE77 PHE78 ASP79 ILE80 HIS81 ARG82 SER83 ALA84 ASN85 THR86 PHE87 PHE88 LEU89 VAL90 VAL91 THR92 ALA93 ALA94 ASN95 ILE96 SER97 HIS98 ASP99 GLY100 ASN101 TYR102 LEU103 CYS104 ARG105 MET106 LYS107 LEU108 GLY109 GLU110 THR111 GLU112 VAL113 THR114 LYS115 GLN116 GLU117 HIS118 LEU119 SER120 VAL121 VAL122 LYS123 PRO124 LEU125 THR126 LEU127 SER128 VAL129 HIS130 SER131 GLU132 ARG133 SER134 GLN135 PHE136 PRO137 ASP138 PHE139 SER140 VAL141 LEU142 THR143 VAL144 THR145 CYS146 THR147 VAL148 ASN149 ALA150 PHE151 PRO152 HIS153 PRO154 HIS155 VAL156 GLN157 TRP158 LEU159 MET160 VAL175 MET176 LYS177 GLU178 LYS179 ASP180 GLY181 SER182 LEU183 SER184 VAL185 ALA186 VAL187 ASP188 LEU189 SER190 LEU191 PRO192 LYS193 PRO194 TRP195 HIS196 LEU197 PRO198 VAL199 THR200 CYS201 VAL202 GLY203 LYS204 ASN205 ASP206 LYS207 GLU208 GLU209 ALA210 HIS211 GLY212 VAL213 TYR214 VAL215 SER216 GLY217 TYR218 LEU219 SER220
Unit 5 TYR6 CYS7 SER8 HIS9 MET10 ILE11 GLY12 SER13 GLY14 HIS15 LEU16 GLN17 SER18 LEU19 GLN20 ARG21 LEU22 ILE23 ASP24 SER25 GLN26 MET27 GLU28 THR29 SER30 CYS31 GLN32 ILE33 THR34 PHE35 GLU36 PHE37 VAL38 ASP39 GLN40 GLU41 GLN42 LEU43 LYS44 ASP45 PRO46 VAL47 CYS48 TYR49 LEU50 LYS51 LYS52 ALA53 PHE54 LEU55 LEU56 VAL57 GLN58 ASP59 ILE60 MET61 GLU62 ASP63 THR64 MET65 ARG66 PHE67 ARG68 ASP69 ASN70 THR71 PRO72 ASN73 ALA74 ILE75 ALA76 ILE77 VAL78 GLN79 LEU80 GLN81 GLU82 LEU83 SER84 LEU85 ARG86 LEU87 LYS88 SER89 CYS90 PHE91 THR92 LYS93 ASP94 TYR95 GLU96 GLU97 HIS98 ASP99 LYS100 ALA101 CYS102 VAL103 ARG104 THR105 PHE106 TYR107 GLU108 THR109 PRO110 LEU111 GLN112 LEU113 LEU114 GLU115 LYS116 VAL117 LYS118 ASN119 VAL120 PHE121 ASN122 GLU123 THR124 LYS125 ASN126 LEU127 LEU128 ASP129 LYS130 ASP131 TRP132 ASN133 ILE134 PHE135 SER136 LYS137 ASN138 CYS139 ASN140 ASN141 SER142 PHE143 ALA144 GLU145 CYS146 SER147
Unit 6 GLU5 TYR6 CYS7 SER8 HIS9 MET10 ILE11 GLY12 SER13 GLY14 HIS15 LEU16 GLN17 SER18 LEU19 GLN20 ARG21 LEU22 ILE23 ASP24 SER25 GLN26 MET27 GLU28 THR29 SER30 CYS31 GLN32 ILE33 THR34 PHE35 GLU36 PHE37 VAL38 ASP39 GLN40 GLU41 GLN42 LEU43 LYS44 ASP45 PRO46 VAL47 CYS48 TYR49 LEU50 LYS51 LYS52 ALA53 PHE54 LEU55 LEU56 VAL57 GLN58 ASP59 ILE60 MET61 GLU62 ASP63 THR64 MET65 ARG66 PHE67 ARG68 ASP69 ASN70 THR71 PRO72 ASN73 ALA74 ILE75 ALA76 ILE77 VAL78 GLN79 LEU80 GLN81 GLU82 LEU83 SER84 LEU85 ARG86 LEU87 LYS88 SER89 CYS90 PHE91 THR92 LYS93 ASP94 GLU96 GLU97 HIS98 ASP99 LYS100 ALA101 CYS102 VAL103 ARG104 THR105 PHE106 TYR107 GLU108 THR109 PRO110 LEU111 GLN112 LEU113 LEU114 GLU115 LYS116 VAL117 LYS118 ASN119 VAL120 PHE121 ASN122 GLU123 THR124 LYS125 ASN126 LEU127 LEU128 ASP129 LYS130 ASP131 TRP132 ASN133 ILE134 PHE135 SER136 LYS137 ASN138 CYS139 ASN140 ASN141 SER142 PHE143 ALA144 GLU145 CYS146
Unit 7 SER4 GLU5 TYR6 CYS7 SER8 HIS9 MET10 ILE11 GLY12 SER13 GLY14 HIS15 LEU16 GLN17 SER18 LEU19 GLN20 ARG21 LEU22 ILE23 ASP24 SER25 GLN26 MET27 GLU28 THR29 SER30 CYS31 GLN32 ILE33 THR34 PHE35 GLU36 PHE37 VAL38 ASP39 GLN40 GLU41 GLN42 LEU43 LYS44 ASP45 PRO46 VAL47 CYS48 TYR49 LEU50 LYS51 LYS52 ALA53 PHE54 LEU55 LEU56 VAL57 GLN58 ASP59 ILE60 MET61 GLU62 ASP63 THR64 MET65 ARG66 PHE67 ARG68 ASP69 ASN70 THR71 PRO72 ASN73 ALA74 ILE75 ALA76 ILE77 VAL78 GLN79 LEU80 GLN81 GLU82 LEU83 SER84 LEU85 ARG86 LEU87 LYS88 SER89 CYS90 PHE91 THR92 LYS93 ASP94 TYR95 GLU96 GLU97 HIS98 ASP99 LYS100 ALA101 CYS102 VAL103 ARG104 THR105 PHE106 TYR107 GLU108 THR109 PRO110 LEU111 GLN112 LEU113 LEU114 GLU115 LYS116 VAL117 LYS118 ASN119 VAL120 PHE121 ASN122 GLU123 THR124 LYS125 ASN126 LEU127 LEU128 ASP129 LYS130 ASP131 TRP132 ASN133 ILE134 PHE135 SER136 LYS137 ASN138 CYS139 ASN140 ASN141 SER142 PHE143 ALA144 GLU145 CYS146
Unit 8 CYS7 SER8 HIS9 MET10 ILE11 GLY12 SER13 GLY14 HIS15 LEU16 GLN17 SER18 LEU19 GLN20 ARG21 LEU22 ILE23 ASP24 SER25 GLN26 MET27 GLU28 THR29 SER30 CYS31 GLN32 ILE33 THR34 PHE35 GLU36 PHE37 VAL38 ASP39 GLN40 GLU41 GLN42 LEU43 LYS44 ASP45 PRO46 VAL47 CYS48 TYR49 LEU50 LYS51 LYS52 ALA53 PHE54 LEU55 LEU56 VAL57 GLN58 ASP59 ILE60 MET61 GLU62 ASP63 THR64 MET65 ARG66 PHE67 ARG68 ASP69 ASN70 THR71 PRO72 ASN73 ALA74 ILE75 ALA76 ILE77 VAL78 GLN79 LEU80 GLN81 GLU82 LEU83 SER84 LEU85 ARG86 LEU87 LYS88 SER89 CYS90 PHE91 THR92 LYS93 ASP94 GLU96 GLU97 HIS98 ASP99 LYS100 ALA101 CYS102 VAL103 ARG104 THR105 PHE106 TYR107 GLU108 THR109 PRO110 LEU111 GLN112 LEU113 LEU114 GLU115 LYS116 VAL117 LYS118 ASN119 VAL120 PHE121 ASN122 GLU123 THR124 LYS125 ASN126 LEU127 LEU128 ASP129 LYS130 ASP131 TRP132 ASN133 ILE134 PHE135 SER136 LYS137 ASN138 CYS139 ASN140 ASN141 SER142 PHE143 ALA144 GLU145 CYS146

Ligands
Unit 9 NAG1 NAG2 BMA3
Unit 10 NAG1 NAG2 BMA3
Unit 11 NAG1 NAG2 BMA3
Unit 12 NAG1 NAG2 BMA3

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany