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Title | CRYSTAL STRUCTURE OF ALPHA-1,3/4-FUCOSIDASE FROM BIFIDOBACTE LONGUM SUBSP. INFANTIS COMPLEXED WITH DEOXYFUCONOJIRIMYCIN | |
Keywords | TIM BARREL, HYDROLASE-HYDROLASE INHIBITOR COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3UES | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ALPHA-1,3/4-FUCOSIDASE | A | 457 | 3583 | 0 |
2 | Protein | ALPHA-1,3/4-FUCOSIDASE | B | 458 | 3587 | 0 |
3 | Ligand | ALPHA-1,3/4-FUCOSIDASE | A | 3 | 0 | 15 |
4 | Ligand | ALPHA-1,3/4-FUCOSIDASE | B | 3 | 0 | 15 |
5 | Water | 1120 | 0 | 1120 | ||
total | 2041 | 7170 | 1150 |
Unit 1 | ILE9 ASN10 LEU11 ASN12 TYR13 LEU14 ALA15 ASN16 VAL17 ARG18 PRO19 SER20 SER21 ARG22 GLN23 LEU24 ALA25 TRP26 GLN27 ARG28 MET29 GLU30 MET31 TYR32 ALA33 PHE34 LEU35 HIS36 PHE37 GLY38 MET39 ASN40 THR41 MET42 THR43 ASP44 ARG45 GLU46 TRP47 GLY48 LEU49 GLY50 HIS51 GLU52 ASP53 PRO54 ALA55 LEU56 PHE57 ASN58 PRO59 ARG60 ASN61 VAL62 ASP63 VAL64 ASP65 GLN66 TRP67 MET68 ASP69 ALA70 LEU71 VAL72 ALA73 GLY74 GLY75 MET76 ALA77 GLY78 VAL79 ILE80 LEU81 THR82 CYS83 LYS84 HIS85 HIS86 ASP87 GLY88 PHE89 CYS90 LEU91 TRP92 PRO93 SER94 ARG95 LEU96 THR97 ARG98 HIS99 THR100 VAL101 ALA102 SER103 SER104 PRO105 TRP106 ARG107 GLU108 GLY109 LYS110 GLY111 ASP112 LEU113 VAL114 ARG115 GLU116 VAL117 SER118 GLU119 SER120 ALA121 ARG122 ARG123 HIS124 GLY125 LEU126 LYS127 PHE128 GLY129 VAL130 TYR131 LEU132 SER133 PRO134 TRP135 ASP136 ARG137 THR138 GLU139 GLU140 SER141 TYR142 GLY143 LYS144 GLY145 LYS146 ALA147 TYR148 ASP149 ASP150 PHE151 TYR152 VAL153 GLY154 GLN155 LEU156 THR157 GLU158 LEU159 LEU160 THR161 GLN162 TYR163 GLY164 PRO165 ILE166 PHE167 SER168 VAL169 TRP170 LEU171 ASP172 GLY173 ALA174 ASN175 GLY176 GLU177 GLY178 LYS179 ASN180 GLY181 LYS182 THR183 GLN184 TYR185 TYR186 ASP187 TRP188 ASP189 ARG190 TYR191 TYR192 ASN193 VAL194 ILE195 ARG196 SER197 LEU198 GLN199 PRO200 ASP201 ALA202 VAL203 ILE204 SER205 VAL206 CYS207 GLY208 PRO209 ASP210 VAL211 ARG212 TRP213 ALA214 GLY215 ASN216 GLU217 ALA218 GLY219 HIS220 VAL221 ARG222 ASP223 ASN224 GLU225 TRP226 SER227 VAL228 VAL229 PRO230 ARG231 ARG232 LEU233 ARG234 SER235 ALA236 GLU237 LEU238 THR239 THR253 THR254 VAL255 SER256 SER257 GLN258 ASP259 ASP260 ASP261 LEU262 GLY263 SER264 ARG265 GLU266 ALA267 VAL268 ALA269 GLY270 TYR271 GLY272 ASP273 ASN274 VAL275 CYS276 TRP277 TYR278 PRO279 ALA280 GLU281 VAL282 ASP283 THR284 SER285 ILE286 ARG287 PRO288 GLY289 TRP290 PHE291 TYR292 HIS293 GLN294 SER295 GLU296 ASP297 ASP298 LYS299 VAL300 MET301 SER302 ALA303 ASP304 GLN305 LEU306 PHE307 ASP308 LEU309 TRP310 LEU311 SER312 ALA313 VAL314 GLY315 GLY316 ASN317 SER318 SER319 LEU320 LEU321 LEU322 ASN323 ILE324 PRO325 PRO326 SER327 PRO328 GLU329 GLY330 LEU331 LEU332 ALA333 GLU334 PRO335 ASP336 VAL337 GLN338 SER339 LEU340 LYS341 GLY342 LEU343 GLY344 ARG345 ARG346 VAL347 SER348 GLU349 PHE350 ARG351 GLU352 ALA353 LEU354 ALA355 SER356 VAL357 ARG358 CYS359 GLU360 ALA361 ARG362 THR363 SER364 SER365 ALA366 SER367 ALA368 ALA369 ALA370 ALA371 HIS372 LEU373 VAL374 ASP375 GLY376 ASN377 ARG378 ASP379 THR380 PHE381 TRP382 ARG383 PRO384 ASP385 ALA386 ASP387 ASP388 ALA389 ALA390 PRO391 ALA392 ILE393 THR394 LEU395 THR396 LEU397 PRO398 GLN399 PRO400 THR401 THR402 ILE403 ASN404 ALA405 ILE406 VAL407 ILE408 GLU409 GLU410 ALA411 ILE412 GLU413 HIS414 GLY415 GLN416 ARG417 ILE418 GLU419 HIS420 LEU421 ARG422 VAL423 THR424 GLY425 ALA426 LEU427 PRO428 ASP429 GLY430 THR431 GLU432 ARG433 VAL434 LEU435 GLY436 GLN437 ALA438 GLY439 THR440 VAL441 GLY442 TYR443 ARG444 ARG445 ILE446 LEU447 ARG448 PHE449 ASP450 ASP451 VAL452 GLU453 VAL454 SER455 SER456 VAL457 THR458 LEU459 HIS460 VAL461 ASP462 GLY463 SER464 ARG465 LEU466 ALA467 PRO468 MET469 ILE470 SER471 ARG472 ALA473 ALA474 ALA475 VAL476 ARG477 ILE478 |
Unit 2 | GLY8 ILE9 ASN10 LEU11 ASN12 TYR13 LEU14 ALA15 ASN16 VAL17 ARG18 PRO19 SER20 SER21 ARG22 GLN23 LEU24 ALA25 TRP26 GLN27 ARG28 MET29 GLU30 MET31 TYR32 ALA33 PHE34 LEU35 HIS36 PHE37 GLY38 MET39 ASN40 THR41 MET42 THR43 ASP44 ARG45 GLU46 TRP47 GLY48 LEU49 GLY50 HIS51 GLU52 ASP53 PRO54 ALA55 LEU56 PHE57 ASN58 PRO59 ARG60 ASN61 VAL62 ASP63 VAL64 ASP65 GLN66 TRP67 MET68 ASP69 ALA70 LEU71 VAL72 ALA73 GLY74 GLY75 MET76 ALA77 GLY78 VAL79 ILE80 LEU81 THR82 CYS83 LYS84 HIS85 HIS86 ASP87 GLY88 PHE89 CYS90 LEU91 TRP92 PRO93 SER94 ARG95 LEU96 THR97 ARG98 HIS99 THR100 VAL101 ALA102 SER103 SER104 PRO105 TRP106 ARG107 GLU108 GLY109 LYS110 GLY111 ASP112 LEU113 VAL114 ARG115 GLU116 VAL117 SER118 GLU119 SER120 ALA121 ARG122 ARG123 HIS124 GLY125 LEU126 LYS127 PHE128 GLY129 VAL130 TYR131 LEU132 SER133 PRO134 TRP135 ASP136 ARG137 THR138 GLU139 GLU140 SER141 TYR142 GLY143 LYS144 GLY145 LYS146 ALA147 TYR148 ASP149 ASP150 PHE151 TYR152 VAL153 GLY154 GLN155 LEU156 THR157 GLU158 LEU159 LEU160 THR161 GLN162 TYR163 GLY164 PRO165 ILE166 PHE167 SER168 VAL169 TRP170 LEU171 ASP172 GLY173 ALA174 ASN175 GLY176 GLU177 GLY178 LYS179 ASN180 GLY181 LYS182 THR183 GLN184 TYR185 TYR186 ASP187 TRP188 ASP189 ARG190 TYR191 TYR192 ASN193 VAL194 ILE195 ARG196 SER197 LEU198 GLN199 PRO200 ASP201 ALA202 VAL203 ILE204 SER205 VAL206 CYS207 GLY208 PRO209 ASP210 VAL211 ARG212 TRP213 ALA214 GLY215 ASN216 GLU217 ALA218 GLY219 HIS220 VAL221 ARG222 ASP223 ASN224 GLU225 TRP226 SER227 VAL228 VAL229 PRO230 ARG231 ARG232 LEU233 ARG234 SER235 ALA236 GLU237 LEU238 THR239 THR253 THR254 VAL255 SER256 SER257 GLN258 ASP259 ASP260 ASP261 LEU262 GLY263 SER264 ARG265 GLU266 ALA267 VAL268 ALA269 GLY270 TYR271 GLY272 ASP273 ASN274 VAL275 CYS276 TRP277 TYR278 PRO279 ALA280 GLU281 VAL282 ASP283 THR284 SER285 ILE286 ARG287 PRO288 GLY289 TRP290 PHE291 TYR292 HIS293 GLN294 SER295 GLU296 ASP297 ASP298 LYS299 VAL300 MET301 SER302 ALA303 ASP304 GLN305 LEU306 PHE307 ASP308 LEU309 TRP310 LEU311 SER312 ALA313 VAL314 GLY315 GLY316 ASN317 SER318 SER319 LEU320 LEU321 LEU322 ASN323 ILE324 PRO325 PRO326 SER327 PRO328 GLU329 GLY330 LEU331 LEU332 ALA333 GLU334 PRO335 ASP336 VAL337 GLN338 SER339 LEU340 LYS341 GLY342 LEU343 GLY344 ARG345 ARG346 VAL347 SER348 GLU349 PHE350 ARG351 GLU352 ALA353 LEU354 ALA355 SER356 VAL357 ARG358 CYS359 GLU360 ALA361 ARG362 THR363 SER364 SER365 ALA366 SER367 ALA368 ALA369 ALA370 ALA371 HIS372 LEU373 VAL374 ASP375 GLY376 ASN377 ARG378 ASP379 THR380 PHE381 TRP382 ARG383 PRO384 ASP385 ALA386 ASP387 ASP388 ALA389 ALA390 PRO391 ALA392 ILE393 THR394 LEU395 THR396 LEU397 PRO398 GLN399 PRO400 THR401 THR402 ILE403 ASN404 ALA405 ILE406 VAL407 ILE408 GLU409 GLU410 ALA411 ILE412 GLU413 HIS414 GLY415 GLN416 ARG417 ILE418 GLU419 HIS420 LEU421 ARG422 VAL423 THR424 GLY425 ALA426 LEU427 PRO428 ASP429 GLY430 THR431 GLU432 ARG433 VAL434 LEU435 GLY436 GLN437 ALA438 GLY439 THR440 VAL441 GLY442 TYR443 ARG444 ARG445 ILE446 LEU447 ARG448 PHE449 ASP450 ASP451 VAL452 GLU453 VAL454 SER455 SER456 VAL457 THR458 LEU459 HIS460 VAL461 ASP462 GLY463 SER464 ARG465 LEU466 ALA467 PRO468 MET469 ILE470 SER471 ARG472 ALA473 ALA474 ALA475 VAL476 ARG477 ILE478 |
Unit 3 | DFU501 EDO502 NA503 |
Unit 4 | DFU501 EDO502 NA503 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |