3U82 - Sequence, Chains, Asymmetric and Biological Units

• Title: BINDING OF HERPES SIMPLEX VIRUS GLYCOPROTEIN D TO NECTIN-1 E HOST CELL ADHESION
• Keywords: HSV-1 GD, NECTIN-1, BINDING MODE, NECTIN-1 DIMERIZATION PREC VIRAL PROTEIN-CELL ADHESION COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3U82	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ENVELOPE GLYCOPROTEIN D	A	231	1814	0
2	Protein	POLIOVIRUS RECEPTOR-RELATED PROTEIN 1	B	300	2350	0
total				531	4164	0

Proteins

Unit 1

PRO 23 VAL 24 LEU 25 ASP 26 GLN 27 LEU 28 THR 29 ASP 30 PRO 31 PRO 32 GLY 33 VAL 34 ARG 35 ARG 36 VAL 37 TYR 38 HIS 39 ILE 40 GLN 41 ALA 42 GLY 43 LEU 44 PRO 45 ASP 46 PRO 47 PHE 48 GLN 49 PRO 50 PRO 51 SER 52 LEU 53 PRO 54 ILE 55 THR 56 VAL 57 TYR 58 TYR 59 ALA 60 VAL 61 LEU 62 GLU 63 ARG 64 ALA 65 CYS 66 ARG 67 SER 68 VAL 69 LEU 70 LEU 71 ASN 72 ALA 73 PRO 74 SER 75 GLU 76 ALA 77 PRO 78 GLN 79 ILE 80 VAL 81 ARG 82 GLY 83 ALA 84 SER 85 GLU 86 ASP 87 VAL 88 ARG 89 LYS 90 GLN 91 PRO 92 TYR 93 ASN 94 LEU 95 THR 96 ILE 97 ALA 98 TRP 99 PHE 100 ARG 101 MET 102 GLY 103 GLY 104 ASN 105 CYS 106 ALA 107 ILE 108 PRO 109 ILE 110 THR 111 VAL 112 MET 113 GLU 114 TYR 115 THR 116 GLU 117 CYS 118 SER 119 TYR 120 ASN 121 LYS 122 SER 123 LEU 124 GLY 125 ALA 126 CYS 127 PRO 128 ILE 129 ARG 130 THR 131 GLN 132 PRO 133 ARG 134 TRP 135 ASN 136 TYR 137 TYR 138 ASP 139 SER 140 PHE 141 SER 142 ALA 143 VAL 144 SER 145 GLU 146 ASP 147 ASN 148 LEU 149 GLY 150 PHE 151 LEU 152 MET 153 HIS 154 ALA 155 PRO 156 ALA 157 PHE 158 GLU 159 THR 160 ALA 161 GLY 162 THR 163 TYR 164 LEU 165 ARG 166 LEU 167 VAL 168 LYS 169 ILE 170 ASN 171 ASP 172 TRP 173 THR 174 GLU 175 ILE 176 THR 177 GLN 178 PHE 179 ILE 180 LEU 181 GLU 182 HIS 183 ARG 184 ALA 185 LYS 186 GLY 187 SER 188 CYS 189 LYS 190 TYR 191 ALA 192 LEU 193 PRO 194 LEU 195 ARG 196 ILE 197 PRO 198 PRO 199 SER 200 ALA 201 CYS 202 LEU 203 SER 204 PRO 205 GLN 206 ALA 207 TYR 208 GLN 209 GLN 210 GLY 211 VAL 212 THR 213 VAL 214 ASP 215 SER 216 ILE 217 GLY 218 MET 219 LEU 220 PRO 221 ARG 222 PHE 223 ILE 224 PRO 225 GLU 226 ASN 227 GLN 228 ARG 229 THR 230 VAL 231 ALA 232 VAL 233 TYR 234 SER 235 LEU 236 LYS 237 ILE 238 ALA 239 GLY 240 TRP 241 HIS 242 GLY 243 PRO 244 LYS 245 ALA 246 PRO 247 TYR 248 THR 249 SER 250 THR 251 LEU 252 LEU 253

Unit 2

ASN 36 ASP 37 SER 38 MET 39 TYR 40 GLY 41 PHE 42 ILE 43 GLY 44 THR 45 ASP 46 VAL 47 VAL 48 LEU 49 HIS 50 CYS 51 SER 52 PHE 53 ALA 54 ASN 55 PRO 56 LEU 57 PRO 58 SER 59 VAL 60 LYS 61 ILE 62 THR 63 GLN 64 VAL 65 THR 66 TRP 67 GLN 68 LYS 69 SER 70 THR 71 ASN 72 GLY 73 SER 74 LYS 75 GLN 76 ASN 77 VAL 78 ALA 79 ILE 80 TYR 81 ASN 82 PRO 83 SER 84 MET 85 GLY 86 VAL 87 SER 88 VAL 89 LEU 90 ALA 91 PRO 92 TYR 93 ARG 94 GLU 95 ARG 96 VAL 97 GLU 98 PHE 99 LEU 100 ARG 101 PRO 102 SER 103 PHE 104 THR 105 ASP 106 GLY 107 THR 108 ILE 109 ARG 110 LEU 111 SER 112 ARG 113 LEU 114 GLU 115 LEU 116 GLU 117 ASP 118 GLU 119 GLY 120 VAL 121 TYR 122 ILE 123 CYS 124 GLU 125 PHE 126 ALA 127 THR 128 PHE 129 PRO 130 THR 131 GLY 132 ASN 133 ARG 134 GLU 135 SER 136 GLN 137 LEU 138 ASN 139 LEU 140 THR 141 VAL 142 MET 143 ALA 144 LYS 145 PRO 146 THR 147 ASN 148 TRP 149 ILE 150 GLU 151 GLY 152 THR 153 GLN 154 ALA 155 VAL 156 LEU 157 ARG 158 ALA 159 LYS 160 LYS 161 GLY 162 GLN 163 ASP 164 ASP 165 LYS 166 VAL 167 LEU 168 VAL 169 ALA 170 THR 171 CYS 172 THR 173 SER 174 ALA 175 ASN 176 GLY 177 LYS 178 PRO 179 PRO 180 SER 181 VAL 182 VAL 183 SER 184 TRP 185 GLU 186 THR 187 ARG 188 LEU 189 LYS 190 GLY 191 GLU 192 ALA 193 GLU 194 TYR 195 GLN 196 GLU 197 ILE 198 ARG 199 ASN 200 PRO 201 ASN 202 GLY 203 THR 204 VAL 205 THR 206 VAL 207 ILE 208 SER 209 ARG 210 TYR 211 ARG 212 LEU 213 VAL 214 PRO 215 SER 216 ARG 217 GLU 218 ALA 219 HIS 220 GLN 221 GLN 222 SER 223 LEU 224 ALA 225 CYS 226 ILE 227 VAL 228 ASN 229 TYR 230 HIS 231 MET 232 ASP 233 ARG 234 PHE 235 LYS 236 GLU 237 SER 238 LEU 239 THR 240 LEU 241 ASN 242 VAL 243 GLN 244 TYR 245 GLU 246 PRO 247 GLU 248 VAL 249 THR 250 ILE 251 GLU 252 GLY 253 PHE 254 ASP 255 GLY 256 ASN 257 TRP 258 TYR 259 LEU 260 GLN 261 ARG 262 MET 263 ASP 264 VAL 265 LYS 266 LEU 267 THR 268 CYS 269 LYS 270 ALA 271 ASP 272 ALA 273 ASN 274 PRO 275 PRO 276 ALA 277 THR 278 GLU 279 TYR 280 HIS 281 TRP 282 THR 283 THR 284 LEU 285 ASN 286 GLY 287 SER 288 LEU 289 PRO 290 LYS 291 GLY 292 VAL 293 GLU 294 ALA 295 GLN 296 ASN 297 ARG 298 THR 299 LEU 300 PHE 301 PHE 302 LYS 303 GLY 304 PRO 305 ILE 306 ASN 307 TYR 308 SER 309 LEU 310 ALA 311 GLY 312 THR 313 TYR 314 ILE 315 CYS 316 GLU 317 ALA 318 THR 319 ASN 320 PRO 321 ILE 322 GLY 323 THR 324 ARG 325 SER 326 GLY 327 GLN 328 VAL 329 GLU 330 VAL 331 ASN 332 ILE 333 THR 334 GLU 335