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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL EFFECTS OF SEQUENCE CONTEXT ON LESION RECOGNITION
Keywords DNA GLYCOSYLASE, DNA REPAIR, SEQUENCE CONTEXT, LESION RECOGN DISULFIDE CROSSLINKING, HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3U6M     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE  A 252 1990 0
2  Other macromolecule   DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*AP*GP*GP*AP 3')  B 10 209 0
3  Other macromolecule   DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*TP*(8OG)P*GP*TP*( P*TP*AP*CP*C)-3')  C 7 103 45
4  Ligand   FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE  A 1 0 1
5 Water     144 0 144
total       414 2302 190

Proteins
Unit 1 PRO2 GLN3 LEU4 PRO5 GLU6 VAL7 GLU8 THR9 ILE10 ARG11 ARG12 THR13 LEU14 LEU15 PRO16 LEU17 ILE18 VAL19 GLY20 LYS21 THR22 ILE23 GLU24 ASP25 VAL26 ARG27 ILE28 PHE29 TRP30 PRO31 ASN32 ILE33 ILE34 ARG35 HIS36 PRO37 ARG38 ASP39 SER40 GLU41 ALA42 PHE43 ALA44 ALA45 ARG46 MET47 ILE48 GLY49 GLN50 THR51 VAL52 ARG53 GLY54 LEU55 GLU56 ARG57 ARG58 GLY59 LYS60 PHE61 LEU62 LYS63 PHE64 LEU65 LEU66 ASP67 ARG68 ASP69 ALA70 LEU71 ILE72 SER73 HIS74 LEU75 ARG76 MET77 GLU78 GLY79 ARG80 TYR81 ALA82 VAL83 ALA84 SER85 ALA86 LEU87 GLU88 PRO89 LEU90 GLU91 PRO92 HIS93 THR94 HIS95 VAL96 VAL97 PHE98 CYS99 PHE100 THR101 ASP102 GLY103 SER104 GLU105 LEU106 ARG107 TYR108 ARG109 ASP110 VAL111 ARG112 LYS113 PHE114 GLY115 THR116 MET117 HIS118 VAL119 TYR120 ALA121 LYS122 GLU123 GLU124 ALA125 ASP126 ARG127 ARG128 PRO129 PRO130 LEU131 ALA132 GLU133 LEU134 GLY135 PRO136 GLU137 PRO138 LEU139 SER140 PRO141 ALA142 PHE143 SER144 PRO145 ALA146 VAL147 LEU148 ALA149 GLU150 ARG151 ALA152 VAL153 LYS154 THR155 LYS156 ARG157 SER158 VAL159 LYS160 ALA161 LEU162 LEU163 LEU164 ASP165 CYS166 THR167 VAL168 VAL169 ALA170 GLY171 PHE172 GLY173 ASN174 ILE175 TYR176 VAL177 ASP178 GLU179 SER180 LEU181 PHE182 ARG183 ALA184 GLY185 ILE186 LEU187 PRO188 GLY189 ARG190 PRO191 ALA192 ALA193 SER194 LEU195 SER196 SER197 LYS198 GLU199 ILE200 GLU201 ARG202 LEU203 HIS204 GLU205 GLU206 MET207 VAL208 ALA209 THR210 ILE211 GLY212 GLU213 ALA214 VAL215 MET216 HIS238 LEU239 TYR240 VAL241 TYR242 GLY243 ARG244 GLN245 GLY246 ASN247 PRO248 CYS249 LYS250 ARG251 CYS252 GLY253 THR254 PRO255 ILE256 GLU257 LYS258 THR259 VAL260 VAL261 ALA262 GLY263 ARG264 GLY265 THR266 HIS267 TYR268 CYS269 PRO270 ARG271 CYS272 GLN273 ARG274

Other macromolecules
Unit 2 DG3 DG4 DT5 DA6 DG7 DA8 DC9 DC10 DA11 DG12
Unit 3 DT7 8OG8 DG9 DT10 CX211 DT12 DA13

Ligands
Unit 4 ZN300

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany